RNA–Protein interactions for RNA: ENST00000370397.7

CHUK-201, Transcript of conserved helix-loop-helix ubiquitous kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHUK, Length 3,625 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHUK-201ENST00000370397 RMND5BQ96G75 393 aaPredicted RBP17.77■□□□□ 0.43
CHUK-201ENST00000370397 TASP1Q9H6P5 420 aa17.77■□□□□ 0.43
CHUK-201ENST00000370397 CLK4Q9HAZ1 481 aaKnown RBP17.77■□□□□ 0.43
CHUK-201ENST00000370397 PRMT7Q9NVM4 692 aaPredicted RBP17.77■□□□□ 0.43
CHUK-201ENST00000370397 ARMC1Q9NVT9 282 aa17.77■□□□□ 0.43
CHUK-201ENST00000370397 SLC8A2Q9UPR5 921 aa17.77■□□□□ 0.43
CHUK-201ENST00000370397 DICER1Q9UPY3 1922 aaKnown RBP17.77■□□□□ 0.43
CHUK-201ENST00000370397 BOLA2-SMG1P6H3BVE0 249 aa17.76■□□□□ 0.43
CHUK-201ENST00000370397 XPO1O14980 1071 aaKnown RBP17.76■□□□□ 0.43
CHUK-201ENST00000370397 PHGDHO43175 533 aaKnown RBP17.76■□□□□ 0.43
CHUK-201ENST00000370397 TNK2Q07912 1038 aa17.76■□□□□ 0.43
CHUK-201ENST00000370397 SLC25A52Q3SY17 297 aa17.76■□□□□ 0.43
CHUK-201ENST00000370397 LRRC8EQ6NSJ5 796 aa17.76■□□□□ 0.43
CHUK-201ENST00000370397 NPWQ8N729 165 aa17.76■□□□□ 0.43
CHUK-201ENST00000370397 TXNDC5Q8NBS9 432 aaKnown RBP17.76■□□□□ 0.43
CHUK-201ENST00000370397 C12orf43Q96C57 262 aaKnown RBP17.76■□□□□ 0.43
CHUK-201ENST00000370397 NOL11Q9H8H0 719 aaKnown RBP17.76■□□□□ 0.43
CHUK-201ENST00000370397 CDC14AQ9UNH5 594 aa17.76■□□□□ 0.43
CHUK-201ENST00000370397 BRCA1P38398 1863 aaKnown RBP17.76■□□□□ 0.43
CHUK-201ENST00000370397 CKMT2P17540 419 aa17.76■□□□□ 0.43
CHUK-201ENST00000370397 DNAJB1P25685 340 aa17.76■□□□□ 0.43
CHUK-201ENST00000370397 ARNTP27540 789 aa17.76■□□□□ 0.43
CHUK-201ENST00000370397 GRM5P41594 1212 aa17.76■□□□□ 0.43
CHUK-201ENST00000370397 MATKP42679 507 aa17.76■□□□□ 0.43
CHUK-201ENST00000370397 PRKCQQ04759 706 aa17.76■□□□□ 0.43
CHUK-201ENST00000370397 SPNS2Q8IVW8 549 aa17.76■□□□□ 0.43
CHUK-201ENST00000370397 ZBTB8BQ8NAP8 495 aaPredicted RBP17.76■□□□□ 0.43
CHUK-201ENST00000370397 ABTB1Q969K4 478 aaPredicted RBP17.76■□□□□ 0.43
CHUK-201ENST00000370397 PLGRKTQ9HBL7 147 aa17.76■□□□□ 0.43
CHUK-201ENST00000370397 VPS45Q9NRW7 570 aa17.76■□□□□ 0.43
CHUK-201ENST00000370397 C20orf96Q9NUD7 363 aaPredicted RBP17.76■□□□□ 0.43
CHUK-201ENST00000370397 SMOXQ9NWM0 555 aa17.76■□□□□ 0.43
CHUK-201ENST00000370397 GOLGA8TH3BQL2 631 aa17.76■□□□□ 0.43
CHUK-201ENST00000370397 GLRBP48167 497 aa17.76■□□□□ 0.43
CHUK-201ENST00000370397 YBX1P67809 324 aaKnown RBP17.76■□□□□ 0.43
CHUK-201ENST00000370397 ZBTB17Q13105 803 aa17.76■□□□□ 0.43
CHUK-201ENST00000370397 ZNF460Q14592 562 aa17.76■□□□□ 0.43
CHUK-201ENST00000370397 ZBTB6Q15916 424 aa17.76■□□□□ 0.43
CHUK-201ENST00000370397 ZBED5Q49AG3 693 aa17.76■□□□□ 0.43
CHUK-201ENST00000370397 NDRG1Q92597 394 aaKnown RBP17.76■□□□□ 0.43
CHUK-201ENST00000370397 CAAP1Q9H8G2 361 aa17.76■□□□□ 0.43
CHUK-201ENST00000370397 MEAF6Q9HAF1 191 aa17.76■□□□□ 0.43
CHUK-201ENST00000370397 IARS2Q9NSE4 1012 aaKnown RBP17.76■□□□□ 0.43
CHUK-201ENST00000370397 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.76■□□□□ 0.43
CHUK-201ENST00000370397 OTOFQ9HC10 1997 aa17.75■□□□□ 0.43
CHUK-201ENST00000370397 NPHS1O60500 1241 aa17.75■□□□□ 0.43
CHUK-201ENST00000370397 DDHD2O94830 711 aa17.75■□□□□ 0.43
CHUK-201ENST00000370397 AHSGP02765 367 aa17.75■□□□□ 0.43
CHUK-201ENST00000370397 MYF6P23409 242 aa17.75■□□□□ 0.43
CHUK-201ENST00000370397 GLRA4Q5JXX5 417 aa17.75■□□□□ 0.43
CHUK-201ENST00000370397 CELF3Q5SZQ8 465 aaKnown RBP17.75■□□□□ 0.43
CHUK-201ENST00000370397 SGIP1Q9BQI5 828 aa17.75■□□□□ 0.43
CHUK-201ENST00000370397 NPLQ9BXD5 320 aaPredicted RBP17.75■□□□□ 0.43
CHUK-201ENST00000370397 XPR1Q9UBH6 696 aa17.75■□□□□ 0.43
CHUK-201ENST00000370397 SLC39A10Q9ULF5 831 aa17.75■□□□□ 0.43
CHUK-201ENST00000370397 SH3GLB1Q9Y371 365 aa17.75■□□□□ 0.43
CHUK-201ENST00000370397 ZBTB24O43167 697 aaPredicted RBP17.75■□□□□ 0.43
CHUK-201ENST00000370397 TGFBIQ15582 683 aa17.75■□□□□ 0.43
CHUK-201ENST00000370397 TRIML2Q8N7C3 387 aa17.75■□□□□ 0.43
CHUK-201ENST00000370397 SNRNP27Q8WVK2 155 aaKnown RBP17.75■□□□□ 0.43
CHUK-201ENST00000370397 RHOJQ9H4E5 214 aa17.75■□□□□ 0.43
CHUK-201ENST00000370397 ALDH2P05091 517 aa17.74■□□□□ 0.43
CHUK-201ENST00000370397 CD247P20963 164 aa17.74■□□□□ 0.43
CHUK-201ENST00000370397 PPP1R3AQ16821 1122 aa17.74■□□□□ 0.43
CHUK-201ENST00000370397 ANKRD52Q8NB46 1076 aa17.74■□□□□ 0.43
CHUK-201ENST00000370397 ZNF419Q96HQ0 510 aaPredicted RBP17.74■□□□□ 0.43
CHUK-201ENST00000370397 GBA3Q9H227 469 aa17.74■□□□□ 0.43
CHUK-201ENST00000370397 RPF2Q9H7B2 306 aaKnown RBP17.74■□□□□ 0.43
CHUK-201ENST00000370397 SETD4Q9NVD3 440 aa17.74■□□□□ 0.43
CHUK-201ENST00000370397 C19orf81C9J6K1 198 aa17.74■□□□□ 0.43
CHUK-201ENST00000370397 ATP6V1B2P21281 511 aa17.74■□□□□ 0.43
CHUK-201ENST00000370397 TNFAIP2Q03169 654 aa17.74■□□□□ 0.43
CHUK-201ENST00000370397 FAM45BPQ6NSW5 357 aa17.74■□□□□ 0.43
CHUK-201ENST00000370397 EXOC8Q8IYI6 725 aa17.74■□□□□ 0.43
CHUK-201ENST00000370397 FAM47BQ8NA70 645 aa17.74■□□□□ 0.43
CHUK-201ENST00000370397 TBC1D15Q8TC07 691 aa17.74■□□□□ 0.43
CHUK-201ENST00000370397 FAM45AQ8TCE6 357 aa17.74■□□□□ 0.43
CHUK-201ENST00000370397 NPY6RQ99463 290 aa17.74■□□□□ 0.43
CHUK-201ENST00000370397 GPATCH1Q9BRR8 931 aaKnown RBP17.74■□□□□ 0.43
CHUK-201ENST00000370397 KIFC1Q9BW19 673 aa17.74■□□□□ 0.43
CHUK-201ENST00000370397 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.74■□□□□ 0.43
CHUK-201ENST00000370397 SEPT10Q9P0V9 454 aa17.74■□□□□ 0.43
CHUK-201ENST00000370397 SFMBT1Q9UHJ3 866 aa17.74■□□□□ 0.43
CHUK-201ENST00000370397 NRCAMQ92823 1304 aa17.74■□□□□ 0.43
CHUK-201ENST00000370397 H3BMQ9 156 aa17.74■□□□□ 0.43
CHUK-201ENST00000370397 DCKP27707 260 aa17.74■□□□□ 0.43
CHUK-201ENST00000370397 ARL4AP40617 200 aa17.74■□□□□ 0.43
CHUK-201ENST00000370397 HADHAP40939 763 aa17.74■□□□□ 0.43
CHUK-201ENST00000370397 COG7P83436 770 aa17.74■□□□□ 0.43
CHUK-201ENST00000370397 PDAP1Q13442 181 aaKnown RBP17.74■□□□□ 0.43
CHUK-201ENST00000370397 LIMS2Q7Z4I7 341 aa17.74■□□□□ 0.43
CHUK-201ENST00000370397 SLC35B4Q969S0 331 aa17.74■□□□□ 0.43
CHUK-201ENST00000370397 COG8Q96MW5 612 aa17.74■□□□□ 0.43
CHUK-201ENST00000370397 MRM3Q9HC36 420 aaKnown RBP17.74■□□□□ 0.43
CHUK-201ENST00000370397 PTBP2Q9UKA9 531 aaKnown RBP17.74■□□□□ 0.43
CHUK-201ENST00000370397 NYNRINQ9P2P1 1898 aaKnown RBP17.74■□□□□ 0.43
CHUK-201ENST00000370397 FOXD2O60548 495 aaPredicted RBP17.73■□□□□ 0.43
CHUK-201ENST00000370397 HNRNPCP07910 306 aaKnown RBP eCLIP17.73■□□□□ 0.43
CHUK-201ENST00000370397 COL6A2P12110 1019 aa17.73■□□□□ 0.43
CHUK-201ENST00000370397 ARCN1P48444 511 aaKnown RBP17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms