RNA–Protein interactions for RNA: ENST00000370361.5

VMA21-202, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 5 BASIC

Gene VMA21, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-202ENST00000370361 C15orf59Q2T9L4 293 aaPredicted RBP16.42■□□□□ 0.22
VMA21-202ENST00000370361 PROX2Q3B8N5 592 aa16.42■□□□□ 0.22
VMA21-202ENST00000370361 PARP15Q460N3 678 aa16.42■□□□□ 0.22
VMA21-202ENST00000370361 INO80DQ53TQ3 878 aaPredicted RBP16.42■□□□□ 0.22
VMA21-202ENST00000370361 DNAJC24Q6P3W2 148 aa16.42■□□□□ 0.22
VMA21-202ENST00000370361 MON1BQ7L1V2 547 aa16.42■□□□□ 0.22
VMA21-202ENST00000370361 MDM1Q8TC05 714 aa16.42■□□□□ 0.22
VMA21-202ENST00000370361 EPAS1Q99814 870 aa16.42■□□□□ 0.22
VMA21-202ENST00000370361 C1QTNF7Q9BXJ2 289 aa16.42■□□□□ 0.22
VMA21-202ENST00000370361 ZDHHC6Q9H6R6 413 aa16.42■□□□□ 0.22
VMA21-202ENST00000370361 CATSPERBQ9H7T0 1116 aa16.42■□□□□ 0.22
VMA21-202ENST00000370361 GPR27Q9NS67 375 aa16.42■□□□□ 0.22
VMA21-202ENST00000370361 ZFR2Q9UPR6 939 aaKnown RBP16.42■□□□□ 0.22
VMA21-202ENST00000370361 APC2O95996 2303 aa16.41■□□□□ 0.22
VMA21-202ENST00000370361 A0A087WV48 116 aa16.41■□□□□ 0.22
VMA21-202ENST00000370361 EPHB6O15197 1021 aa16.41■□□□□ 0.22
VMA21-202ENST00000370361 FGF10O15520 208 aaPredicted RBP16.41■□□□□ 0.22
VMA21-202ENST00000370361 PRLRP16471 622 aa16.41■□□□□ 0.22
VMA21-202ENST00000370361 DGKAP23743 735 aa16.41■□□□□ 0.22
VMA21-202ENST00000370361 RFC1P35251 1148 aaPredicted RBP16.41■□□□□ 0.22
VMA21-202ENST00000370361 KLK7P49862 253 aa16.41■□□□□ 0.22
VMA21-202ENST00000370361 DUSP3P51452 185 aaPredicted RBP16.41■□□□□ 0.22
VMA21-202ENST00000370361 DNAJC3Q13217 504 aa16.41■□□□□ 0.22
VMA21-202ENST00000370361 RTL3Q8N8U3 475 aaKnown RBP16.41■□□□□ 0.22
VMA21-202ENST00000370361 OR13H1Q8NG92 308 aa16.41■□□□□ 0.22
VMA21-202ENST00000370361 JOSD2Q8TAC2 188 aa16.41■□□□□ 0.22
VMA21-202ENST00000370361 GDAP1L1Q96MZ0 367 aa16.41■□□□□ 0.22
VMA21-202ENST00000370361 AGPAT1Q99943 283 aa16.41■□□□□ 0.22
VMA21-202ENST00000370361 CNPY3Q9BT09 278 aa16.41■□□□□ 0.22
VMA21-202ENST00000370361 NLGN3Q9NZ94 848 aa16.41■□□□□ 0.22
VMA21-202ENST00000370361 DNAI1Q9UI46 699 aa16.41■□□□□ 0.22
VMA21-202ENST00000370361 NEU3Q9UQ49 428 aa16.41■□□□□ 0.22
VMA21-202ENST00000370361 FCF1Q9Y324 198 aaKnown RBP16.41■□□□□ 0.22
VMA21-202ENST00000370361 CSNK1G3Q9Y6M4 447 aa16.41■□□□□ 0.22
VMA21-202ENST00000370361 ARID1BQ8NFD5 2236 aaPredicted RBP16.41■□□□□ 0.22
VMA21-202ENST00000370361 WASH4PA8MWX3 477 aa16.4■□□□□ 0.22
VMA21-202ENST00000370361 NEMP1O14524 444 aa16.4■□□□□ 0.22
VMA21-202ENST00000370361 FPGTO14772 594 aa16.4■□□□□ 0.22
VMA21-202ENST00000370361 PIAS2O75928 621 aa16.4■□□□□ 0.22
VMA21-202ENST00000370361 IGSF6O95976 241 aa16.4■□□□□ 0.22
VMA21-202ENST00000370361 GP1BAP07359 652 aa16.4■□□□□ 0.22
VMA21-202ENST00000370361 EPHB2P29323 1055 aa16.4■□□□□ 0.22
VMA21-202ENST00000370361 CYP4F3Q08477 520 aa16.4■□□□□ 0.22
VMA21-202ENST00000370361 RTP5Q14D33 572 aa16.4■□□□□ 0.22
VMA21-202ENST00000370361 HES3Q5TGS1 186 aa16.4■□□□□ 0.22
VMA21-202ENST00000370361 WDR59Q6PJI9 974 aa16.4■□□□□ 0.22
VMA21-202ENST00000370361 GCNT7Q6ZNI0 430 aa16.4■□□□□ 0.22
VMA21-202ENST00000370361 PARS2Q7L3T8 475 aaKnown RBP16.4■□□□□ 0.22
VMA21-202ENST00000370361 PTAR1Q7Z6K3 402 aaPredicted RBP16.4■□□□□ 0.22
VMA21-202ENST00000370361 PARGQ86W56 976 aa16.4■□□□□ 0.22
VMA21-202ENST00000370361 CCDC185Q8N715 623 aa16.4■□□□□ 0.22
VMA21-202ENST00000370361 FAM181AQ8N9Y4 354 aa16.4■□□□□ 0.22
VMA21-202ENST00000370361 HCAR2Q8TDS4 363 aa16.4■□□□□ 0.22
VMA21-202ENST00000370361 PCDHB18PQ96TA0 734 aa16.4■□□□□ 0.22
VMA21-202ENST00000370361 C1QTNF2Q9BXJ5 285 aa16.4■□□□□ 0.22
VMA21-202ENST00000370361 CALN1Q9BXU9 219 aa16.4■□□□□ 0.22
VMA21-202ENST00000370361 SEPT11Q9NVA2 429 aaKnown RBP16.4■□□□□ 0.22
VMA21-202ENST00000370361 DKK3Q9UBP4 350 aa16.4■□□□□ 0.22
VMA21-202ENST00000370361 MFHAS1Q9Y4C4 1052 aa16.4■□□□□ 0.22
VMA21-202ENST00000370361 DSPP15924 2871 aaKnown RBP16.4■□□□□ 0.22
VMA21-202ENST00000370361 FAM149AA5PLN7 773 aa16.39■□□□□ 0.21
VMA21-202ENST00000370361 C16orf96A6NNT2 1141 aa16.39■□□□□ 0.21
VMA21-202ENST00000370361 SIGLEC6O43699 453 aa16.39■□□□□ 0.21
VMA21-202ENST00000370361 CD160O95971 181 aa16.39■□□□□ 0.21
VMA21-202ENST00000370361 CKMT1AP12532 417 aa16.39■□□□□ 0.21
VMA21-202ENST00000370361 ACVRL1P37023 503 aa16.39■□□□□ 0.21
VMA21-202ENST00000370361 ZNF135P52742 658 aaPredicted RBP16.39■□□□□ 0.21
VMA21-202ENST00000370361 DAB2P98082 770 aa16.39■□□□□ 0.21
VMA21-202ENST00000370361 TYRO3Q06418 890 aa16.39■□□□□ 0.21
VMA21-202ENST00000370361 PTK2BQ14289 1009 aa16.39■□□□□ 0.21
VMA21-202ENST00000370361 MYLK3Q32MK0 819 aa16.39■□□□□ 0.21
VMA21-202ENST00000370361 SEL1L3Q68CR1 1132 aa16.39■□□□□ 0.21
VMA21-202ENST00000370361 DCUN1D2Q6PH85 259 aa16.39■□□□□ 0.21
VMA21-202ENST00000370361 Q6ZSR6 202 aa16.39■□□□□ 0.21
VMA21-202ENST00000370361 SLC25A45Q8N413 288 aa16.39■□□□□ 0.21
VMA21-202ENST00000370361 RYBPQ8N488 228 aaPredicted RBP16.39■□□□□ 0.21
VMA21-202ENST00000370361 BTN2A2Q8WVV5 523 aa16.39■□□□□ 0.21
VMA21-202ENST00000370361 TBATAQ96M53 351 aa16.39■□□□□ 0.21
VMA21-202ENST00000370361 NCAPGQ9BPX3 1015 aa16.39■□□□□ 0.21
VMA21-202ENST00000370361 TM6SF2Q9BZW4 377 aa16.39■□□□□ 0.21
VMA21-202ENST00000370361 CLCA2Q9UQC9 943 aa16.39■□□□□ 0.21
VMA21-202ENST00000370361 RAXQ9Y2V3 346 aa16.39■□□□□ 0.21
VMA21-202ENST00000370361 CACNA1GO43497 2377 aa16.39■□□□□ 0.21
VMA21-202ENST00000370361 DOCK9Q9BZ29 2069 aa16.39■□□□□ 0.21
VMA21-202ENST00000370361 ADAMTS20P59510 1910 aa16.39■□□□□ 0.21
VMA21-202ENST00000370361 SPTY2D1-AS1A0A0U1RR47 76 aa16.38■□□□□ 0.21
VMA21-202ENST00000370361 TCRBV5S1A1TA0A578 114 aa16.38■□□□□ 0.21
VMA21-202ENST00000370361 FAM72CH0Y354 149 aa16.38■□□□□ 0.21
VMA21-202ENST00000370361 KRIT1O00522 736 aa16.38■□□□□ 0.21
VMA21-202ENST00000370361 SCAMP1O15126 338 aa16.38■□□□□ 0.21
VMA21-202ENST00000370361 BUB1O43683 1085 aa16.38■□□□□ 0.21
VMA21-202ENST00000370361 SDC3O75056 442 aa16.38■□□□□ 0.21
VMA21-202ENST00000370361 PAK4O96013 591 aaPredicted RBP16.38■□□□□ 0.21
VMA21-202ENST00000370361 CSF2P04141 144 aa16.38■□□□□ 0.21
VMA21-202ENST00000370361 NME1P15531 152 aaKnown RBP16.38■□□□□ 0.21
VMA21-202ENST00000370361 YPEL5P62699 121 aa16.38■□□□□ 0.21
VMA21-202ENST00000370361 MAPK8IP2Q13387 824 aaPredicted RBP16.38■□□□□ 0.21
VMA21-202ENST00000370361 FAM72AQ5TYM5 149 aa16.38■□□□□ 0.21
VMA21-202ENST00000370361 ACAD10Q6JQN1 1059 aa16.38■□□□□ 0.21
VMA21-202ENST00000370361 FAM72DQ6L9T8 149 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms