RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 SPTY2D1-AS1A0A0U1RR47 76 aa16.29■□□□□ 0.2
CKS1B-202ENST00000368436 FAM72CH0Y354 149 aa16.29■□□□□ 0.2
CKS1B-202ENST00000368436 TSPAN6O43657 245 aa16.29■□□□□ 0.2
CKS1B-202ENST00000368436 LRIG2O94898 1065 aa16.29■□□□□ 0.2
CKS1B-202ENST00000368436 CSF2P04141 144 aa16.29■□□□□ 0.2
CKS1B-202ENST00000368436 ALPPL2P10696 532 aa16.29■□□□□ 0.2
CKS1B-202ENST00000368436 UNGP13051 313 aaPredicted RBP16.29■□□□□ 0.2
CKS1B-202ENST00000368436 SOX5P35711 763 aa16.29■□□□□ 0.2
CKS1B-202ENST00000368436 ABL2P42684 1182 aa16.29■□□□□ 0.2
CKS1B-202ENST00000368436 RABIFP47224 123 aa16.29■□□□□ 0.2
CKS1B-202ENST00000368436 KLK7P49862 253 aa16.29■□□□□ 0.2
CKS1B-202ENST00000368436 GEMIN4P57678 1058 aaKnown RBP16.29■□□□□ 0.2
CKS1B-202ENST00000368436 POLR2FP61218 127 aaKnown RBP16.29■□□□□ 0.2
CKS1B-202ENST00000368436 HNRNPKP61978 463 aaKnown RBP eCLIP16.29■□□□□ 0.2
CKS1B-202ENST00000368436 PTP4A2Q12974 167 aa16.29■□□□□ 0.2
CKS1B-202ENST00000368436 ZNF542PQ5EBM4 170 aa16.29■□□□□ 0.2
CKS1B-202ENST00000368436 FAM72AQ5TYM5 149 aa16.29■□□□□ 0.2
CKS1B-202ENST00000368436 CDKAL1Q5VV42 579 aa16.29■□□□□ 0.2
CKS1B-202ENST00000368436 FAM72DQ6L9T8 149 aa16.29■□□□□ 0.2
CKS1B-202ENST00000368436 TRIM72Q6ZMU5 477 aa16.29■□□□□ 0.2
CKS1B-202ENST00000368436 LRRC69Q6ZNQ3 347 aa16.29■□□□□ 0.2
CKS1B-202ENST00000368436 TMC6Q7Z403 805 aa16.29■□□□□ 0.2
CKS1B-202ENST00000368436 PTAR1Q7Z6K3 402 aaPredicted RBP16.29■□□□□ 0.2
CKS1B-202ENST00000368436 PHLDB2Q86SQ0 1253 aa16.29■□□□□ 0.2
CKS1B-202ENST00000368436 FAM72BQ86X60 149 aa16.29■□□□□ 0.2
CKS1B-202ENST00000368436 SLC30A5Q8TAD4 765 aa16.29■□□□□ 0.2
CKS1B-202ENST00000368436 GPT2Q8TD30 523 aa16.29■□□□□ 0.2
CKS1B-202ENST00000368436 FGF11Q92914 225 aa16.29■□□□□ 0.2
CKS1B-202ENST00000368436 RAB7BQ96AH8 199 aa16.29■□□□□ 0.2
CKS1B-202ENST00000368436 C11orf70Q9BRQ4 267 aa16.29■□□□□ 0.2
CKS1B-202ENST00000368436 MAGEB5Q9BZ81 275 aa16.29■□□□□ 0.2
CKS1B-202ENST00000368436 TM6SF2Q9BZW4 377 aa16.29■□□□□ 0.2
CKS1B-202ENST00000368436 VPS16Q9H269 839 aa16.29■□□□□ 0.2
CKS1B-202ENST00000368436 PRORYQ9H606 182 aa16.29■□□□□ 0.2
CKS1B-202ENST00000368436 ZDHHC6Q9H6R6 413 aa16.29■□□□□ 0.2
CKS1B-202ENST00000368436 USP29Q9HBJ7 922 aa16.29■□□□□ 0.2
CKS1B-202ENST00000368436 DNAJC28Q9NX36 388 aa16.29■□□□□ 0.2
CKS1B-202ENST00000368436 DNAI1Q9UI46 699 aa16.29■□□□□ 0.2
CKS1B-202ENST00000368436 DAAM1Q9Y4D1 1078 aa16.29■□□□□ 0.2
CKS1B-202ENST00000368436 U3KQA8 63 aa16.29■□□□□ 0.2
CKS1B-202ENST00000368436 C16orf96A6NNT2 1141 aa16.28■□□□□ 0.2
CKS1B-202ENST00000368436 K7ESM1 405 aa16.28■□□□□ 0.2
CKS1B-202ENST00000368436 FPGTO14772 594 aa16.28■□□□□ 0.2
CKS1B-202ENST00000368436 RRP8O43159 456 aaKnown RBP16.28■□□□□ 0.2
CKS1B-202ENST00000368436 OPA1O60313 960 aa16.28■□□□□ 0.2
CKS1B-202ENST00000368436 BRINP1O60477 761 aa16.28■□□□□ 0.2
CKS1B-202ENST00000368436 GSRP00390 522 aa16.28■□□□□ 0.2
CKS1B-202ENST00000368436 GP1BAP07359 652 aa16.28■□□□□ 0.2
CKS1B-202ENST00000368436 NME1P15531 152 aaKnown RBP16.28■□□□□ 0.2
CKS1B-202ENST00000368436 GKP32189 559 aa16.28■□□□□ 0.2
CKS1B-202ENST00000368436 HDAC4P56524 1084 aa16.28■□□□□ 0.2
CKS1B-202ENST00000368436 GSCP56915 257 aaPredicted RBP16.28■□□□□ 0.2
CKS1B-202ENST00000368436 KRT31Q15323 416 aa16.28■□□□□ 0.2
CKS1B-202ENST00000368436 ZNF805Q5CZA5 627 aa16.28■□□□□ 0.2
CKS1B-202ENST00000368436 RWDD4Q6NW29 188 aaKnown RBP16.28■□□□□ 0.2
CKS1B-202ENST00000368436 KDM7AQ6ZMT4 941 aa16.28■□□□□ 0.2
CKS1B-202ENST00000368436 CCDC185Q8N715 623 aa16.28■□□□□ 0.2
CKS1B-202ENST00000368436 OR2AP1Q8NGE2 309 aa16.28■□□□□ 0.2
CKS1B-202ENST00000368436 BAP1Q92560 729 aa16.28■□□□□ 0.2
CKS1B-202ENST00000368436 NTAN1Q96AB6 310 aa16.28■□□□□ 0.2
CKS1B-202ENST00000368436 PCDHB18PQ96TA0 734 aa16.28■□□□□ 0.2
CKS1B-202ENST00000368436 DUSP23Q9BVJ7 150 aa16.28■□□□□ 0.2
CKS1B-202ENST00000368436 CSNK1G3Q9Y6M4 447 aa16.28■□□□□ 0.2
CKS1B-202ENST00000368436 COL27A1Q8IZC6 1860 aaPredicted RBP16.28■□□□□ 0.2
CKS1B-202ENST00000368436 LOC400499M0QZD8 3231 aa16.28■□□□□ 0.2
CKS1B-202ENST00000368436 IGLON5A6NGN9 336 aa16.27■□□□□ 0.2
CKS1B-202ENST00000368436 EPHB6O15197 1021 aa16.27■□□□□ 0.2
CKS1B-202ENST00000368436 SPINT1O43278 529 aa16.27■□□□□ 0.2
CKS1B-202ENST00000368436 KDELR3O43731 214 aa16.27■□□□□ 0.2
CKS1B-202ENST00000368436 GJB6O95452 261 aa16.27■□□□□ 0.2
CKS1B-202ENST00000368436 POP4O95707 220 aaKnown RBP16.27■□□□□ 0.2
CKS1B-202ENST00000368436 PLEKP08567 350 aaPredicted RBP16.27■□□□□ 0.2
CKS1B-202ENST00000368436 MYF5P13349 255 aa16.27■□□□□ 0.2
CKS1B-202ENST00000368436 RFC1P35251 1148 aaPredicted RBP16.27■□□□□ 0.2
CKS1B-202ENST00000368436 ACTN2P35609 894 aa16.27■□□□□ 0.2
CKS1B-202ENST00000368436 DUSP3P51452 185 aaPredicted RBP16.27■□□□□ 0.2
CKS1B-202ENST00000368436 PFN3P60673 137 aa16.27■□□□□ 0.2
CKS1B-202ENST00000368436 SNRPD1P62314 119 aaKnown RBP16.27■□□□□ 0.2
CKS1B-202ENST00000368436 C1QBPQ07021 282 aaKnown RBP16.27■□□□□ 0.2
CKS1B-202ENST00000368436 SGCGQ13326 291 aa16.27■□□□□ 0.2
CKS1B-202ENST00000368436 POLD3Q15054 466 aaPredicted RBP16.27■□□□□ 0.2
CKS1B-202ENST00000368436 MYLK3Q32MK0 819 aa16.27■□□□□ 0.2
CKS1B-202ENST00000368436 TBC1D25Q3MII6 688 aa16.27■□□□□ 0.2
CKS1B-202ENST00000368436 PARGQ86W56 976 aa16.27■□□□□ 0.2
CKS1B-202ENST00000368436 DENND6BQ8NEG7 585 aa16.27■□□□□ 0.2
CKS1B-202ENST00000368436 ZNF548Q8NEK5 533 aaPredicted RBP16.27■□□□□ 0.2
CKS1B-202ENST00000368436 OR6K2Q8NGY2 324 aa16.27■□□□□ 0.2
CKS1B-202ENST00000368436 FAM172AQ8WUF8 416 aa16.27■□□□□ 0.2
CKS1B-202ENST00000368436 TBC1D31Q96DN5 1066 aa16.27■□□□□ 0.2
CKS1B-202ENST00000368436 UBL7Q96S82 380 aaPredicted RBP16.27■□□□□ 0.2
CKS1B-202ENST00000368436 OSBPL1AQ9BXW6 950 aa16.27■□□□□ 0.2
CKS1B-202ENST00000368436 NLRC4Q9NPP4 1024 aa16.27■□□□□ 0.2
CKS1B-202ENST00000368436 FAM207AQ9NSI2 230 aaPredicted RBP16.27■□□□□ 0.2
CKS1B-202ENST00000368436 KLF15Q9UIH9 416 aa16.27■□□□□ 0.2
CKS1B-202ENST00000368436 HPCAL4Q9UM19 191 aa16.27■□□□□ 0.2
CKS1B-202ENST00000368436 SIK3Q9Y2K2 1263 aa16.27■□□□□ 0.2
CKS1B-202ENST00000368436 PCDHB1Q9Y5F3 818 aa16.27■□□□□ 0.2
CKS1B-202ENST00000368436 RAI2Q9Y5P3 530 aa16.27■□□□□ 0.2
CKS1B-202ENST00000368436 ASXL3Q9C0F0 2248 aa16.27■□□□□ 0.19
CKS1B-202ENST00000368436 SMG1Q96Q15 3661 aaKnown RBP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms