RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 EBF2Q9HAK2 575 aa22.78■■□□□ 1.24
ECHDC1-203ENST00000368291 CAPN10Q9HC96 672 aa22.78■■□□□ 1.24
ECHDC1-203ENST00000368291 DCHS1Q96JQ0 3298 aa22.78■■□□□ 1.24
ECHDC1-203ENST00000368291 TMEM131Q92545 1883 aa22.78■■□□□ 1.24
ECHDC1-203ENST00000368291 LRRC72A6NJI9 287 aa22.77■■□□□ 1.24
ECHDC1-203ENST00000368291 KHNYNO15037 678 aaKnown RBP22.77■■□□□ 1.24
ECHDC1-203ENST00000368291 PJA2O43164 708 aa22.77■■□□□ 1.24
ECHDC1-203ENST00000368291 MFSD11O43934 449 aa22.77■■□□□ 1.24
ECHDC1-203ENST00000368291 MAFKO60675 156 aa22.77■■□□□ 1.24
ECHDC1-203ENST00000368291 POP4O95707 220 aaKnown RBP22.77■■□□□ 1.24
ECHDC1-203ENST00000368291 PEX11BO96011 259 aa22.77■■□□□ 1.24
ECHDC1-203ENST00000368291 SERPINB6P35237 376 aa22.77■■□□□ 1.24
ECHDC1-203ENST00000368291 VAV2P52735 878 aa22.77■■□□□ 1.24
ECHDC1-203ENST00000368291 MAP7D3Q8IWC1 876 aa22.77■■□□□ 1.24
ECHDC1-203ENST00000368291 RYBPQ8N488 228 aaPredicted RBP22.77■■□□□ 1.24
ECHDC1-203ENST00000368291 TPCN2Q8NHX9 752 aa22.77■■□□□ 1.24
ECHDC1-203ENST00000368291 EXOC2Q96KP1 924 aa22.77■■□□□ 1.24
ECHDC1-203ENST00000368291 GDAP1L1Q96MZ0 367 aa22.77■■□□□ 1.24
ECHDC1-203ENST00000368291 HDAC8Q9BY41 377 aa22.77■■□□□ 1.24
ECHDC1-203ENST00000368291 KDM4CQ9H3R0 1056 aa22.77■■□□□ 1.24
ECHDC1-203ENST00000368291 SP110Q9HB58 689 aa22.77■■□□□ 1.24
ECHDC1-203ENST00000368291 BTNL10A8MVZ5 291 aa22.76■■□□□ 1.23
ECHDC1-203ENST00000368291 KRIT1O00522 736 aa22.76■■□□□ 1.23
ECHDC1-203ENST00000368291 INSIG1O15503 277 aa22.76■■□□□ 1.23
ECHDC1-203ENST00000368291 FSBPO95073 299 aa22.76■■□□□ 1.23
ECHDC1-203ENST00000368291 IPO7O95373 1038 aaKnown RBP22.76■■□□□ 1.23
ECHDC1-203ENST00000368291 SERPINF2P08697 491 aa22.76■■□□□ 1.23
ECHDC1-203ENST00000368291 ITGB7P26010 798 aa22.76■■□□□ 1.23
ECHDC1-203ENST00000368291 RGRP47804 291 aa22.76■■□□□ 1.23
ECHDC1-203ENST00000368291 PPP2CBP62714 309 aa22.76■■□□□ 1.23
ECHDC1-203ENST00000368291 PPP2CAP67775 309 aa22.76■■□□□ 1.23
ECHDC1-203ENST00000368291 AASDHQ4L235 1098 aaPredicted RBP22.76■■□□□ 1.23
ECHDC1-203ENST00000368291 ZFYVE27Q5T4F4 411 aa22.76■■□□□ 1.23
ECHDC1-203ENST00000368291 ERN2Q76MJ5 926 aaKnown RBP22.76■■□□□ 1.23
ECHDC1-203ENST00000368291 RHOT1Q8IXI2 618 aa22.76■■□□□ 1.23
ECHDC1-203ENST00000368291 TSEN2Q8NCE0 465 aaKnown RBP22.76■■□□□ 1.23
ECHDC1-203ENST00000368291 SNX19Q92543 992 aa22.76■■□□□ 1.23
ECHDC1-203ENST00000368291 LRIG1Q96JA1 1093 aa22.76■■□□□ 1.23
ECHDC1-203ENST00000368291 RNF157Q96PX1 679 aa22.76■■□□□ 1.23
ECHDC1-203ENST00000368291 FSCN3Q9NQT6 498 aa22.76■■□□□ 1.23
ECHDC1-203ENST00000368291 LRRK1Q38SD2 2015 aa22.76■■□□□ 1.23
ECHDC1-203ENST00000368291 KNL1Q8NG31 2342 aa22.76■■□□□ 1.23
ECHDC1-203ENST00000368291 A0A0U1RQJ8 604 aa22.76■■□□□ 1.23
ECHDC1-203ENST00000368291 LOC105378220A0A1B0GUY1 285 aaPredicted RBP22.76■■□□□ 1.23
ECHDC1-203ENST00000368291 LRRD1A4D1F6 860 aa22.76■■□□□ 1.23
ECHDC1-203ENST00000368291 ZNF487B1APH4 448 aa22.76■■□□□ 1.23
ECHDC1-203ENST00000368291 MUSKO15146 869 aa22.76■■□□□ 1.23
ECHDC1-203ENST00000368291 SPOPO43791 374 aa22.76■■□□□ 1.23
ECHDC1-203ENST00000368291 PALMO75781 387 aa22.76■■□□□ 1.23
ECHDC1-203ENST00000368291 IGSF6O95976 241 aa22.76■■□□□ 1.23
ECHDC1-203ENST00000368291 CCR5P51681 352 aa22.76■■□□□ 1.23
ECHDC1-203ENST00000368291 C11orf63Q6NUN7 778 aa22.76■■□□□ 1.23
ECHDC1-203ENST00000368291 PARS2Q7L3T8 475 aaKnown RBP22.76■■□□□ 1.23
ECHDC1-203ENST00000368291 VSIG1Q86XK7 387 aa22.76■■□□□ 1.23
ECHDC1-203ENST00000368291 ZCCHC9Q8N567 271 aaKnown RBP22.76■■□□□ 1.23
ECHDC1-203ENST00000368291 CEP76Q8TAP6 659 aa22.76■■□□□ 1.23
ECHDC1-203ENST00000368291 DESI2Q9BSY9 194 aa22.76■■□□□ 1.23
ECHDC1-203ENST00000368291 MIR1-1HGQ9H1L0 117 aa22.76■■□□□ 1.23
ECHDC1-203ENST00000368291 SLC6A14Q9UN76 642 aa22.76■■□□□ 1.23
ECHDC1-203ENST00000368291 SPTBN4Q9H254 2564 aa22.75■■□□□ 1.23
ECHDC1-203ENST00000368291 TBC1D3DA0A087WVF3 549 aa22.75■■□□□ 1.23
ECHDC1-203ENST00000368291 TBC1D3IA0A087WXS9 549 aa22.75■■□□□ 1.23
ECHDC1-203ENST00000368291 TBC1D3EA0A087X179 549 aa22.75■■□□□ 1.23
ECHDC1-203ENST00000368291 TBC1D3KA0A087X1G2 549 aa22.75■■□□□ 1.23
ECHDC1-203ENST00000368291 TBC1D3FA6NER0 549 aaPredicted RBP22.75■■□□□ 1.23
ECHDC1-203ENST00000368291 PRR5-ARHGAP8B1AHC4 643 aa22.75■■□□□ 1.23
ECHDC1-203ENST00000368291 TBC1D3LB9A6J9 549 aa22.75■■□□□ 1.23
ECHDC1-203ENST00000368291 LATO43561 262 aa22.75■■□□□ 1.23
ECHDC1-203ENST00000368291 CFIP05156 583 aa22.75■■□□□ 1.23
ECHDC1-203ENST00000368291 UGT2B4P06133 528 aa22.75■■□□□ 1.23
ECHDC1-203ENST00000368291 TBC1D3HP0C7X1 549 aa22.75■■□□□ 1.23
ECHDC1-203ENST00000368291 TNNT1P13805 278 aa22.75■■□□□ 1.23
ECHDC1-203ENST00000368291 CD27P26842 260 aa22.75■■□□□ 1.23
ECHDC1-203ENST00000368291 GSDMDP57764 484 aa22.75■■□□□ 1.23
ECHDC1-203ENST00000368291 ARHGAP8P85298 464 aa22.75■■□□□ 1.23
ECHDC1-203ENST00000368291 SLC10A7Q0GE19 358 aa22.75■■□□□ 1.23
ECHDC1-203ENST00000368291 SLC10A2Q12908 348 aaPredicted RBP22.75■■□□□ 1.23
ECHDC1-203ENST00000368291 RFTN1Q14699 578 aaPredicted RBP22.75■■□□□ 1.23
ECHDC1-203ENST00000368291 ZNF805Q5CZA5 627 aa22.75■■□□□ 1.23
ECHDC1-203ENST00000368291 TBC1D3GQ6DHY5 549 aa22.75■■□□□ 1.23
ECHDC1-203ENST00000368291 TBC1D3CQ6IPX1 549 aa22.75■■□□□ 1.23
ECHDC1-203ENST00000368291 RABEPKQ7Z6M1 372 aa22.75■■□□□ 1.23
ECHDC1-203ENST00000368291 TBC1D3Q8IZP1 549 aaPredicted RBP22.75■■□□□ 1.23
ECHDC1-203ENST00000368291 RMDN1Q96DB5 314 aa22.75■■□□□ 1.23
ECHDC1-203ENST00000368291 PPP1R16AQ96I34 528 aa22.75■■□□□ 1.23
ECHDC1-203ENST00000368291 ZNF599Q96NL3 588 aa22.75■■□□□ 1.23
ECHDC1-203ENST00000368291 NUSAP1Q9BXS6 441 aaKnown RBP22.75■■□□□ 1.23
ECHDC1-203ENST00000368291 CPEB1Q9BZB8 566 aaKnown RBP22.75■■□□□ 1.23
ECHDC1-203ENST00000368291 DYRK4Q9NR20 520 aa22.75■■□□□ 1.23
ECHDC1-203ENST00000368291 SUSD2Q9UGT4 822 aa22.75■■□□□ 1.23
ECHDC1-203ENST00000368291 ASCC3Q8N3C0 2202 aaKnown RBP22.74■■□□□ 1.23
ECHDC1-203ENST00000368291 A0A1B0GTW7 788 aa22.74■■□□□ 1.23
ECHDC1-203ENST00000368291 A0A1W2PPC4 97 aa22.74■■□□□ 1.23
ECHDC1-203ENST00000368291 GOLGA6L6A8MZA4 724 aa22.74■■□□□ 1.23
ECHDC1-203ENST00000368291 CDX4O14627 284 aaPredicted RBP22.74■■□□□ 1.23
ECHDC1-203ENST00000368291 BCAT2O15382 392 aaPredicted RBP22.74■■□□□ 1.23
ECHDC1-203ENST00000368291 PSTPIP1O43586 416 aa22.74■■□□□ 1.23
ECHDC1-203ENST00000368291 MAP3K6O95382 1288 aa22.74■■□□□ 1.23
ECHDC1-203ENST00000368291 KRT1P04264 644 aa22.74■■□□□ 1.23
ECHDC1-203ENST00000368291 ADRB3P13945 408 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms