RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 ANKRD27Q96NW4 1050 aa14.2□□□□□ -0.14
USF1-202ENST00000368020 RC3H2Q9HBD1 1191 aaKnown RBP14.2□□□□□ -0.14
USF1-202ENST00000368020 NMRAL1Q9HBL8 299 aa14.2□□□□□ -0.14
USF1-202ENST00000368020 FBXO6Q9NRD1 293 aaPredicted RBP14.2□□□□□ -0.14
USF1-202ENST00000368020 NOP53Q9NZM5 478 aaKnown RBP14.2□□□□□ -0.14
USF1-202ENST00000368020 TMEM216Q9P0N5 145 aa14.2□□□□□ -0.14
USF1-202ENST00000368020 APOBEC2Q9Y235 224 aaKnown RBP14.2□□□□□ -0.14
USF1-202ENST00000368020 PCDHB12Q9Y5F1 795 aa14.2□□□□□ -0.14
USF1-202ENST00000368020 MTMR11A4FU01 709 aa14.19□□□□□ -0.14
USF1-202ENST00000368020 DRGXA6NNA5 263 aa14.19□□□□□ -0.14
USF1-202ENST00000368020 TBKBP1A7MCY6 615 aa14.19□□□□□ -0.14
USF1-202ENST00000368020 KLHL2O95198 593 aa14.19□□□□□ -0.14
USF1-202ENST00000368020 PAPSS2O95340 614 aaPredicted RBP14.19□□□□□ -0.14
USF1-202ENST00000368020 MT-CYBP00156 380 aaPredicted RBP14.19□□□□□ -0.14
USF1-202ENST00000368020 C2P06681 752 aa14.19□□□□□ -0.14
USF1-202ENST00000368020 HAPLN1P10915 354 aaPredicted RBP14.19□□□□□ -0.14
USF1-202ENST00000368020 TPH1P17752 444 aa14.19□□□□□ -0.14
USF1-202ENST00000368020 KCNA4P22459 653 aa14.19□□□□□ -0.14
USF1-202ENST00000368020 CSRP3P50461 194 aa14.19□□□□□ -0.14
USF1-202ENST00000368020 IL10RBQ08334 325 aa14.19□□□□□ -0.14
USF1-202ENST00000368020 BTG3Q14201 252 aaPredicted RBP14.19□□□□□ -0.14
USF1-202ENST00000368020 PREPLQ4J6C6 727 aaPredicted RBP14.19□□□□□ -0.14
USF1-202ENST00000368020 C10orf120Q5SQS8 335 aa14.19□□□□□ -0.14
USF1-202ENST00000368020 RASIP1Q5U651 963 aa14.19□□□□□ -0.14
USF1-202ENST00000368020 DENND5AQ6IQ26 1287 aa14.19□□□□□ -0.14
USF1-202ENST00000368020 C16orf46Q6P387 395 aa14.19□□□□□ -0.14
USF1-202ENST00000368020 RAPH1Q70E73 1250 aa14.19□□□□□ -0.14
USF1-202ENST00000368020 CMTR2Q8IYT2 770 aaKnown RBP14.19□□□□□ -0.14
USF1-202ENST00000368020 PDZD8Q8NEN9 1154 aa14.19□□□□□ -0.14
USF1-202ENST00000368020 OVCA2Q8WZ82 227 aa14.19□□□□□ -0.14
USF1-202ENST00000368020 MCUR1Q96AQ8 359 aa14.19□□□□□ -0.14
USF1-202ENST00000368020 IMP4Q96G21 291 aaKnown RBP14.19□□□□□ -0.14
USF1-202ENST00000368020 NMUR2Q9GZQ4 415 aa14.19□□□□□ -0.14
USF1-202ENST00000368020 IL1RAPL1Q9NZN1 696 aa14.19□□□□□ -0.14
USF1-202ENST00000368020 MPP6Q9NZW5 540 aa14.19□□□□□ -0.14
USF1-202ENST00000368020 DNAJC16Q9Y2G8 782 aa14.19□□□□□ -0.14
USF1-202ENST00000368020 PDE4DIPQ5VU43 2346 aa14.19□□□□□ -0.14
USF1-202ENST00000368020 CAPN14A8MX76 684 aa14.18□□□□□ -0.14
USF1-202ENST00000368020 TRIM13O60858 407 aa14.18□□□□□ -0.14
USF1-202ENST00000368020 UPP2O95045 317 aa14.18□□□□□ -0.14
USF1-202ENST00000368020 GJB5O95377 273 aa14.18□□□□□ -0.14
USF1-202ENST00000368020 PGFP49763 221 aa14.18□□□□□ -0.14
USF1-202ENST00000368020 IRX4P78413 519 aa14.18□□□□□ -0.14
USF1-202ENST00000368020 POU6F1Q14863 301 aa14.18□□□□□ -0.14
USF1-202ENST00000368020 MGAT5BQ3V5L5 792 aa14.18□□□□□ -0.14
USF1-202ENST00000368020 DNAL1Q4LDG9 190 aa14.18□□□□□ -0.14
USF1-202ENST00000368020 PPM1JQ5JR12 505 aa14.18□□□□□ -0.14
USF1-202ENST00000368020 CMC1Q7Z7K0 106 aa14.18□□□□□ -0.14
USF1-202ENST00000368020 C14orf80Q86SX3 495 aa14.18□□□□□ -0.14
USF1-202ENST00000368020 TMPRSS6Q8IU80 811 aa14.18□□□□□ -0.14
USF1-202ENST00000368020 TEX26Q8N6G2 289 aa14.18□□□□□ -0.14
USF1-202ENST00000368020 ATAD1Q8NBU5 361 aa14.18□□□□□ -0.14
USF1-202ENST00000368020 OR6Y1Q8NGX8 325 aa14.18□□□□□ -0.14
USF1-202ENST00000368020 PEX13Q92968 403 aa14.18□□□□□ -0.14
USF1-202ENST00000368020 UTP4Q969X6 686 aaKnown RBP14.18□□□□□ -0.14
USF1-202ENST00000368020 MRGPRX2Q96LB1 330 aa14.18□□□□□ -0.14
USF1-202ENST00000368020 ZNF599Q96NL3 588 aa14.18□□□□□ -0.14
USF1-202ENST00000368020 PGLYRP2Q96PD5 576 aa14.18□□□□□ -0.14
USF1-202ENST00000368020 TTPALQ9BTX7 342 aa14.18□□□□□ -0.14
USF1-202ENST00000368020 CD248Q9HCU0 757 aa14.18□□□□□ -0.14
USF1-202ENST00000368020 TREX1Q9NSU2 369 aa14.18□□□□□ -0.14
USF1-202ENST00000368020 ARL8BQ9NVJ2 186 aa14.18□□□□□ -0.14
USF1-202ENST00000368020 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.18□□□□□ -0.14
USF1-202ENST00000368020 TAGLN3Q9UI15 199 aa14.18□□□□□ -0.14
USF1-202ENST00000368020 SLC39A10Q9ULF5 831 aa14.18□□□□□ -0.14
USF1-202ENST00000368020 MAGED2Q9UNF1 606 aaPredicted RBP14.18□□□□□ -0.14
USF1-202ENST00000368020 SLC4A7Q9Y6M7 1214 aa14.18□□□□□ -0.14
USF1-202ENST00000368020 MYLKQ15746 1914 aa14.18□□□□□ -0.14
USF1-202ENST00000368020 A0A087X1B8 175 aa14.18□□□□□ -0.14
USF1-202ENST00000368020 ZBBXA8MT70 800 aa14.18□□□□□ -0.14
USF1-202ENST00000368020 TBC1D4O60343 1298 aa14.18□□□□□ -0.14
USF1-202ENST00000368020 RAMP2O60895 175 aa14.18□□□□□ -0.14
USF1-202ENST00000368020 PMPCBO75439 489 aa14.18□□□□□ -0.14
USF1-202ENST00000368020 TOP3BO95985 862 aaKnown RBP14.18□□□□□ -0.14
USF1-202ENST00000368020 ZDHHC11BP0C7U3 371 aa14.18□□□□□ -0.14
USF1-202ENST00000368020 AOC1P19801 751 aa14.18□□□□□ -0.14
USF1-202ENST00000368020 SERPINH1P50454 418 aaKnown RBP14.18□□□□□ -0.14
USF1-202ENST00000368020 WNT3AP56704 352 aa14.18□□□□□ -0.14
USF1-202ENST00000368020 USP46P62068 366 aa14.18□□□□□ -0.14
USF1-202ENST00000368020 HTRA4P83105 476 aaPredicted RBP14.18□□□□□ -0.14
USF1-202ENST00000368020 POU4F1Q01851 419 aa14.18□□□□□ -0.14
USF1-202ENST00000368020 TAF10Q12962 218 aa14.18□□□□□ -0.14
USF1-202ENST00000368020 USP10Q14694 798 aaKnown RBP14.18□□□□□ -0.14
USF1-202ENST00000368020 SLC14A2Q15849 920 aa14.18□□□□□ -0.14
USF1-202ENST00000368020 KDELC1Q6UW63 502 aa14.18□□□□□ -0.14
USF1-202ENST00000368020 ZCCHC23Q6ZST2 131 aa14.18□□□□□ -0.14
USF1-202ENST00000368020 BBS5Q8N3I7 341 aa14.18□□□□□ -0.14
USF1-202ENST00000368020 C2CD4AQ8NCU7 369 aaPredicted RBP14.18□□□□□ -0.14
USF1-202ENST00000368020 AGAP11Q8TF27 550 aa14.18□□□□□ -0.14
USF1-202ENST00000368020 HMCESQ96FZ2 354 aa14.18□□□□□ -0.14
USF1-202ENST00000368020 TTLL2Q9BWV7 592 aa14.18□□□□□ -0.14
USF1-202ENST00000368020 GPR62Q9BZJ7 368 aa14.18□□□□□ -0.14
USF1-202ENST00000368020 C1orf21Q9H246 121 aa14.18□□□□□ -0.14
USF1-202ENST00000368020 NOL6Q9H6R4 1146 aaKnown RBP14.18□□□□□ -0.14
USF1-202ENST00000368020 ATP13A1Q9HD20 1204 aa14.18□□□□□ -0.14
USF1-202ENST00000368020 NDFIP2Q9NV92 336 aa14.18□□□□□ -0.14
USF1-202ENST00000368020 MARCH5Q9NX47 278 aa14.18□□□□□ -0.14
USF1-202ENST00000368020 CXXC1Q9P0U4 656 aaPredicted RBP14.18□□□□□ -0.14
USF1-202ENST00000368020 HSFX1Q9UBD0 423 aa14.18□□□□□ -0.14
USF1-202ENST00000368020 NUDT5Q9UKK9 219 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms