RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 INTS5Q6P9B9 1019 aaKnown RBP3.8□□□□□ -1.8
SYNE1-207ENST00000367255 ATCAYQ86WG3 371 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 MRPL57Q9BQC6 102 aaKnown RBP3.8□□□□□ -1.8
SYNE1-207ENST00000367255 ZDHHC5Q9C0B5 715 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 SLC35C2Q9NQQ7 365 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 TMA7Q9Y2S6 64 aaKnown RBP3.8□□□□□ -1.8
SYNE1-207ENST00000367255 CCDC182A6NF36 153 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 CHP2O43745 196 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 PGK2P07205 417 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 GNAZP19086 355 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 PPP5CP53041 499 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 TBX2Q13207 712 aaPredicted RBP3.8□□□□□ -1.8
SYNE1-207ENST00000367255 TMED2Q15363 201 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 SBK1Q52WX2 424 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 BEND5Q7L4P6 421 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 MOSPD2Q8NHP6 518 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 TRUB1Q8WWH5 349 aaKnown RBP3.8□□□□□ -1.8
SYNE1-207ENST00000367255 PRICKLE1Q96MT3 831 aaPredicted RBP3.8□□□□□ -1.8
SYNE1-207ENST00000367255 PTPN22Q9Y2R2 807 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 AXIN2Q9Y2T1 843 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 ILVBLA1L0T0 632 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 APOC4-APOC2K7ER74 178 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 APOC2P02655 101 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 IL13P35225 146 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 KLK7P49862 253 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 ITKQ08881 620 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 SEMA5AQ13591 1074 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 SSX1Q16384 188 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 TMEM63BQ5T3F8 832 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 AWAT2Q6E213 333 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 TSPAN33Q86UF1 283 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 ZSCAN18Q8TBC5 510 aaPredicted RBP3.8□□□□□ -1.8
SYNE1-207ENST00000367255 OIT3Q8WWZ8 545 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 POLMQ9NP87 494 aaPredicted RBP3.8□□□□□ -1.8
SYNE1-207ENST00000367255 VPS51Q9UID3 782 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 ABCC6O95255 1503 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 CNTNAP1P78357 1384 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 ANPEPP15144 967 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 THEMIS2Q5TEJ8 643 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 LDLRP01130 860 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 IL1RNP18510 177 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 HUNKP57058 714 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 NOMO3P69849 1222 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 MYL7Q01449 175 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 SLC9A5Q14940 896 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 NOMO1Q15155 1222 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 TWF2Q6IBS0 349 aaKnown RBP3.8□□□□□ -1.8
SYNE1-207ENST00000367255 FAM117BQ6P1L5 589 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 DCP2Q8IU60 420 aaKnown RBP3.8□□□□□ -1.8
SYNE1-207ENST00000367255 ANKRD53Q8N9V6 530 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 HERVK_113Q902F9 699 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 CLPTM1LQ96KA5 538 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 TCF12Q99081 682 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 TRABDQ9H4I3 376 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 ACSS3Q9H6R3 686 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 PCDHGB2Q9Y5G2 931 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 ATP6V1G2O95670 118 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 ASLP04424 464 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 CHRNA5P30532 468 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 FEN1P39748 380 aaKnown RBP3.8□□□□□ -1.8
SYNE1-207ENST00000367255 DPCR1Q3MIW9 517 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 VWA5B1Q5TIE3 1220 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 SEL1L3Q68CR1 1132 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 PLET1Q6UQ28 207 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 ZFPM1Q8IX07 1006 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 PMM1Q92871 262 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 ASB9Q96DX5 294 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 SCYL1Q96KG9 808 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 NPLQ9BXD5 320 aaPredicted RBP3.8□□□□□ -1.8
SYNE1-207ENST00000367255 SLCO5A1Q9H2Y9 848 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 KCNK13Q9HB14 408 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 CD300AQ9UGN4 299 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 H7C2Y5 167 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 PMLP29590 882 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 ABCG1P45844 678 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 GTF2IP78347 998 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 GARNL3Q5VVW2 1013 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 TIGD7Q6NT04 549 aaPredicted RBP3.8□□□□□ -1.8
SYNE1-207ENST00000367255 HERC6Q8IVU3 1022 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 KCT2Q8NC54 265 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 OR8K3Q8NH51 312 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 TLE6Q9H808 572 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 C3orf14Q9HBI5 128 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 DDX3XO00571 662 aaKnown RBP eCLIP3.79□□□□□ -1.8
SYNE1-207ENST00000367255 DHFRP00374 187 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 NPR1P16066 1061 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 GALP22466 123 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 CDH8P55286 799 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 TMEM26Q6ZUK4 368 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 TRPM4Q8TD43 1214 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 C12orf71A8MTZ7 269 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 VILLO15195 856 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 ACSL4O60488 711 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 LPXNO60711 386 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 SPOCK1Q08629 439 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 CCDC149Q6ZUS6 474 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 ANKEF1Q9NU02 776 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 ANKRD33BA6NCL7 494 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 GPR89AB7ZAQ6 455 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 AIM2O14862 343 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms