RNA–Protein interactions for RNA: ENST00000366813.1

H3F3A-201, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3A, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-201ENST00000366813 RUVBL1Q9Y265 456 aaKnown RBP7.83□□□□□ -1.16
H3F3A-201ENST00000366813 PCDHA3Q9Y5H8 950 aa7.83□□□□□ -1.16
H3F3A-201ENST00000366813 C2CD3Q4AC94 2353 aa7.83□□□□□ -1.16
H3F3A-201ENST00000366813 RELNP78509 3460 aa7.83□□□□□ -1.16
H3F3A-201ENST00000366813 ATXN2Q99700 1313 aaKnown RBP7.82□□□□□ -1.16
H3F3A-201ENST00000366813 CNTNAP2Q9UHC6 1331 aa7.82□□□□□ -1.16
H3F3A-201ENST00000366813 FAM149AA5PLN7 773 aa7.82□□□□□ -1.16
H3F3A-201ENST00000366813 A6NNZ2 444 aa7.82□□□□□ -1.16
H3F3A-201ENST00000366813 TRIM24O15164 1050 aa7.82□□□□□ -1.16
H3F3A-201ENST00000366813 CHADO15335 359 aa7.82□□□□□ -1.16
H3F3A-201ENST00000366813 ATG13O75143 517 aa7.82□□□□□ -1.16
H3F3A-201ENST00000366813 TADA2AO75478 443 aa7.82□□□□□ -1.16
H3F3A-201ENST00000366813 CFIP05156 583 aa7.82□□□□□ -1.16
H3F3A-201ENST00000366813 SFPQP23246 707 aaKnown RBP eCLIP7.82□□□□□ -1.16
H3F3A-201ENST00000366813 KIF5BP33176 963 aa7.82□□□□□ -1.16
H3F3A-201ENST00000366813 OR1D2P34982 312 aa7.82□□□□□ -1.16
H3F3A-201ENST00000366813 MLH1P40692 756 aa7.82□□□□□ -1.16
H3F3A-201ENST00000366813 PI4KAP42356 2102 aa7.82□□□□□ -1.16
H3F3A-201ENST00000366813 CCR10P46092 362 aa7.82□□□□□ -1.16
H3F3A-201ENST00000366813 HNRNPDQ14103 355 aaKnown RBP7.82□□□□□ -1.16
H3F3A-201ENST00000366813 GALEQ14376 348 aa7.82□□□□□ -1.16
H3F3A-201ENST00000366813 MAPK6Q16659 721 aa7.82□□□□□ -1.16
H3F3A-201ENST00000366813 UBE2SQ16763 222 aa7.82□□□□□ -1.16
H3F3A-201ENST00000366813 BMT2Q1RMZ1 405 aa7.82□□□□□ -1.16
H3F3A-201ENST00000366813 DPY19L2P1Q6NXN4 242 aa7.82□□□□□ -1.16
H3F3A-201ENST00000366813 CHST15Q7LFX5 561 aaPredicted RBP7.82□□□□□ -1.16
H3F3A-201ENST00000366813 CATSPER4Q7RTX7 472 aa7.82□□□□□ -1.16
H3F3A-201ENST00000366813 HASPINQ8TF76 798 aa7.82□□□□□ -1.16
H3F3A-201ENST00000366813 MYOCQ99972 504 aa7.82□□□□□ -1.16
H3F3A-201ENST00000366813 MXRA8Q9BRK3 442 aa7.82□□□□□ -1.16
H3F3A-201ENST00000366813 TRIM4Q9C037 500 aa7.82□□□□□ -1.16
H3F3A-201ENST00000366813 TMEM60Q9H2L4 133 aa7.82□□□□□ -1.16
H3F3A-201ENST00000366813 LY9Q9HBG7 655 aa7.82□□□□□ -1.16
H3F3A-201ENST00000366813 AGO4Q9HCK5 861 aaKnown RBP7.82□□□□□ -1.16
H3F3A-201ENST00000366813 ADAM28Q9UKQ2 775 aa7.82□□□□□ -1.16
H3F3A-201ENST00000366813 PDCD11Q14690 1871 aaKnown RBP7.82□□□□□ -1.16
H3F3A-201ENST00000366813 PTPRBP23467 1997 aa7.81□□□□□ -1.16
H3F3A-201ENST00000366813 ARL5CA6NH57 179 aa7.81□□□□□ -1.16
H3F3A-201ENST00000366813 ENO4A6NNW6 628 aa7.81□□□□□ -1.16
H3F3A-201ENST00000366813 MOSPD3O75425 235 aa7.81□□□□□ -1.16
H3F3A-201ENST00000366813 APBB3O95704 486 aa7.81□□□□□ -1.16
H3F3A-201ENST00000366813 PCP11498 1178 aaKnown RBP7.81□□□□□ -1.16
H3F3A-201ENST00000366813 NR4A1P22736 598 aa7.81□□□□□ -1.16
H3F3A-201ENST00000366813 PTGER3P43115 390 aa7.81□□□□□ -1.16
H3F3A-201ENST00000366813 CLRN1P58418 232 aa7.81□□□□□ -1.16
H3F3A-201ENST00000366813 NKX6-1P78426 367 aaPredicted RBP7.81□□□□□ -1.16
H3F3A-201ENST00000366813 LY6DQ14210 128 aa7.81□□□□□ -1.16
H3F3A-201ENST00000366813 FAM171A1Q5VUB5 890 aa7.81□□□□□ -1.16
H3F3A-201ENST00000366813 MIS18BP1Q6P0N0 1132 aa7.81□□□□□ -1.16
H3F3A-201ENST00000366813 RHOUQ7L0Q8 258 aa7.81□□□□□ -1.16
H3F3A-201ENST00000366813 HEATR3Q7Z4Q2 680 aa7.81□□□□□ -1.16
H3F3A-201ENST00000366813 MINDY1Q8N5J2 469 aa7.81□□□□□ -1.16
H3F3A-201ENST00000366813 FAM167AQ96KS9 214 aa7.81□□□□□ -1.16
H3F3A-201ENST00000366813 LRRC3BQ96PB8 259 aa7.81□□□□□ -1.16
H3F3A-201ENST00000366813 PAAF1Q9BRP4 392 aa7.81□□□□□ -1.16
H3F3A-201ENST00000366813 C11orf54Q9H0W9 315 aaPredicted RBP7.81□□□□□ -1.16
H3F3A-201ENST00000366813 RNF41Q9H4P4 317 aaPredicted RBP7.81□□□□□ -1.16
H3F3A-201ENST00000366813 CYP4F11Q9HBI6 524 aa7.81□□□□□ -1.16
H3F3A-201ENST00000366813 LMBRD1Q9NUN5 540 aa7.81□□□□□ -1.16
H3F3A-201ENST00000366813 ANKMY1Q9P2S6 941 aa7.81□□□□□ -1.16
H3F3A-201ENST00000366813 IL17BQ9UHF5 180 aa7.81□□□□□ -1.16
H3F3A-201ENST00000366813 PACSIN3Q9UKS6 424 aa7.81□□□□□ -1.16
H3F3A-201ENST00000366813 COL5A1P20908 1838 aaPredicted RBP7.81□□□□□ -1.16
H3F3A-201ENST00000366813 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.8□□□□□ -1.16
H3F3A-201ENST00000366813 ZNF197O14709 1029 aa7.8□□□□□ -1.16
H3F3A-201ENST00000366813 NUDT3O95989 172 aa7.8□□□□□ -1.16
H3F3A-201ENST00000366813 EGFP01133 1207 aa7.8□□□□□ -1.16
H3F3A-201ENST00000366813 GP1BBP13224 206 aa7.8□□□□□ -1.16
H3F3A-201ENST00000366813 AGFG1P52594 562 aaKnown RBP7.8□□□□□ -1.16
H3F3A-201ENST00000366813 FCHO2Q0JRZ9 810 aa7.8□□□□□ -1.16
H3F3A-201ENST00000366813 CCDC157Q569K6 752 aa7.8□□□□□ -1.16
H3F3A-201ENST00000366813 SYT12Q8IV01 421 aa7.8□□□□□ -1.16
H3F3A-201ENST00000366813 GPR150Q8NGU9 434 aa7.8□□□□□ -1.16
H3F3A-201ENST00000366813 B3GNT5Q9BYG0 378 aa7.8□□□□□ -1.16
H3F3A-201ENST00000366813 CPEB1Q9BZB8 566 aaKnown RBP7.8□□□□□ -1.16
H3F3A-201ENST00000366813 FAM204AQ9H8W3 233 aa7.8□□□□□ -1.16
H3F3A-201ENST00000366813 PSTPIP2Q9H939 334 aa7.8□□□□□ -1.16
H3F3A-201ENST00000366813 TRPV4Q9HBA0 871 aa7.8□□□□□ -1.16
H3F3A-201ENST00000366813 FBRSL1Q9HCM7 1045 aaKnown RBP7.8□□□□□ -1.16
H3F3A-201ENST00000366813 PCDHA6Q9UN73 950 aa7.8□□□□□ -1.16
H3F3A-201ENST00000366813 HES2Q9Y543 173 aa7.8□□□□□ -1.16
H3F3A-201ENST00000366813 ADAMTS9Q9P2N4 1935 aa7.8□□□□□ -1.16
H3F3A-201ENST00000366813 AHCTF1Q8WYP5 2266 aa7.8□□□□□ -1.16
H3F3A-201ENST00000366813 SF3B1O75533 1304 aaKnown RBP eCLIP7.8□□□□□ -1.163e-6■■■□□ 16
H3F3A-201ENST00000366813 VWA8A3KMH1 1905 aa7.79□□□□□ -1.16
H3F3A-201ENST00000366813 A0A088AWK7 358 aa7.79□□□□□ -1.16
H3F3A-201ENST00000366813 FAM227AF5H4B4 570 aa7.79□□□□□ -1.16
H3F3A-201ENST00000366813 TLX3O43711 291 aaPredicted RBP7.79□□□□□ -1.16
H3F3A-201ENST00000366813 MYL4P12829 197 aa7.79□□□□□ -1.16
H3F3A-201ENST00000366813 TYRP14679 529 aa7.79□□□□□ -1.16
H3F3A-201ENST00000366813 HOXA11P31270 313 aaPredicted RBP7.79□□□□□ -1.16
H3F3A-201ENST00000366813 GFPT1Q06210 699 aaPredicted RBP7.79□□□□□ -1.16
H3F3A-201ENST00000366813 GRSF1Q12849 480 aaKnown RBP eCLIP7.79□□□□□ -1.16
H3F3A-201ENST00000366813 DMC1Q14565 340 aa7.79□□□□□ -1.16
H3F3A-201ENST00000366813 TEAD2Q15562 447 aa7.79□□□□□ -1.16
H3F3A-201ENST00000366813 ANO6Q4KMQ2 910 aa7.79□□□□□ -1.16
H3F3A-201ENST00000366813 TMEM196Q5HYL7 178 aa7.79□□□□□ -1.16
H3F3A-201ENST00000366813 CYP4A22Q5TCH4 519 aa7.79□□□□□ -1.16
H3F3A-201ENST00000366813 NPNTQ6UXI9 565 aa7.79□□□□□ -1.16
H3F3A-201ENST00000366813 SRGAP1Q7Z6B7 1085 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms