RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 SPATS1Q496A3 300 aa11.92□□□□□ -0.5
CDC42BPA-202ENST00000366764 KHDC1Q4VXA5 237 aaKnown RBP11.92□□□□□ -0.5
CDC42BPA-202ENST00000366764 GNASQ5JWF2 1037 aa11.92□□□□□ -0.5
CDC42BPA-202ENST00000366764 C16orf46Q6P387 395 aa11.92□□□□□ -0.5
CDC42BPA-202ENST00000366764 UNC5BQ8IZJ1 945 aa11.92□□□□□ -0.5
CDC42BPA-202ENST00000366764 RCN3Q96D15 328 aa11.92□□□□□ -0.5
CDC42BPA-202ENST00000366764 CDH9Q9ULB4 789 aa11.92□□□□□ -0.5
CDC42BPA-202ENST00000366764 PROSER1Q86XN7 944 aa11.92□□□□□ -0.5
CDC42BPA-202ENST00000366764 FIG4Q92562 907 aa11.92□□□□□ -0.5
CDC42BPA-202ENST00000366764 PRDM12Q9H4Q4 367 aa11.92□□□□□ -0.5
CDC42BPA-202ENST00000366764 TUBA8Q9NY65 449 aaPredicted RBP11.92□□□□□ -0.5
CDC42BPA-202ENST00000366764 RGS5O15539 181 aa11.92□□□□□ -0.5
CDC42BPA-202ENST00000366764 PLIN3O60664 434 aa11.92□□□□□ -0.5
CDC42BPA-202ENST00000366764 ARIH2O95376 493 aa11.92□□□□□ -0.5
CDC42BPA-202ENST00000366764 ZNF286BP0CG31 522 aa11.92□□□□□ -0.5
CDC42BPA-202ENST00000366764 CXCL9Q07325 125 aa11.92□□□□□ -0.5
CDC42BPA-202ENST00000366764 BRMS1LQ5PSV4 323 aa11.92□□□□□ -0.5
CDC42BPA-202ENST00000366764 SAMD7Q7Z3H4 446 aa11.92□□□□□ -0.5
CDC42BPA-202ENST00000366764 DUSP16Q9BY84 665 aa11.92□□□□□ -0.5
CDC42BPA-202ENST00000366764 NRP2O60462 931 aa11.92□□□□□ -0.5
CDC42BPA-202ENST00000366764 AP2A1O95782 977 aa11.92□□□□□ -0.5
CDC42BPA-202ENST00000366764 DPEP1P16444 411 aa11.92□□□□□ -0.5
CDC42BPA-202ENST00000366764 FOXN2P32314 431 aa11.92□□□□□ -0.5
CDC42BPA-202ENST00000366764 OR2T34Q8NGX1 318 aa11.92□□□□□ -0.5
CDC42BPA-202ENST00000366764 OR2T3Q8NH03 318 aa11.92□□□□□ -0.5
CDC42BPA-202ENST00000366764 C7orf43Q8WVR3 580 aa11.92□□□□□ -0.5
CDC42BPA-202ENST00000366764 ADPRHL2Q9NX46 363 aa11.92□□□□□ -0.5
CDC42BPA-202ENST00000366764 NME5P56597 212 aa11.91□□□□□ -0.5
CDC42BPA-202ENST00000366764 UGCGQ16739 394 aa11.91□□□□□ -0.5
CDC42BPA-202ENST00000366764 PTAR1Q7Z6K3 402 aaPredicted RBP11.91□□□□□ -0.5
CDC42BPA-202ENST00000366764 HERC6Q8IVU3 1022 aa11.91□□□□□ -0.5
CDC42BPA-202ENST00000366764 TOP1MTQ969P6 601 aa11.91□□□□□ -0.5
CDC42BPA-202ENST00000366764 MRPL48Q96GC5 212 aaKnown RBP11.91□□□□□ -0.5
CDC42BPA-202ENST00000366764 PANX3Q96QZ0 392 aa11.91□□□□□ -0.5
CDC42BPA-202ENST00000366764 CAMKK2Q96RR4 588 aa11.91□□□□□ -0.5
CDC42BPA-202ENST00000366764 LIMD1Q9UGP4 676 aa11.91□□□□□ -0.5
CDC42BPA-202ENST00000366764 SERPINI2O75830 405 aa11.91□□□□□ -0.5
CDC42BPA-202ENST00000366764 TFEBP19484 476 aa11.91□□□□□ -0.5
CDC42BPA-202ENST00000366764 SCNN1AP37088 669 aa11.91□□□□□ -0.5
CDC42BPA-202ENST00000366764 KLF10Q13118 480 aa11.91□□□□□ -0.5
CDC42BPA-202ENST00000366764 PFKFB4Q16877 469 aa11.91□□□□□ -0.5
CDC42BPA-202ENST00000366764 PLEKHH3Q7Z736 793 aa11.91□□□□□ -0.5
CDC42BPA-202ENST00000366764 TOP6BLQ8N6T0 577 aa11.91□□□□□ -0.5
CDC42BPA-202ENST00000366764 SLC9A7Q96T83 725 aa11.91□□□□□ -0.5
CDC42BPA-202ENST00000366764 SPASTQ9UBP0 616 aa11.91□□□□□ -0.5
CDC42BPA-202ENST00000366764 CNTNAP2Q9UHC6 1331 aa11.91□□□□□ -0.5
CDC42BPA-202ENST00000366764 CCL15-CCL14A0A0B4J2E2 113 aa11.91□□□□□ -0.5
CDC42BPA-202ENST00000366764 PRR23D1E9PI22 279 aaPredicted RBP11.91□□□□□ -0.5
CDC42BPA-202ENST00000366764 PRR23D2P0DMB1 279 aaPredicted RBP11.91□□□□□ -0.5
CDC42BPA-202ENST00000366764 PTPN1P18031 435 aaKnown RBP11.91□□□□□ -0.5
CDC42BPA-202ENST00000366764 EPHA3P29320 983 aa11.91□□□□□ -0.5
CDC42BPA-202ENST00000366764 CCL15Q16663 113 aa11.91□□□□□ -0.5
CDC42BPA-202ENST00000366764 TNS4Q8IZW8 715 aa11.91□□□□□ -0.5
CDC42BPA-202ENST00000366764 MYDGFQ969H8 173 aa11.91□□□□□ -0.5
CDC42BPA-202ENST00000366764 DAPK2Q9UIK4 370 aa11.91□□□□□ -0.5
CDC42BPA-202ENST00000366764 PHLPP1O60346 1717 aa11.91□□□□□ -0.5
CDC42BPA-202ENST00000366764 PPP2R1BP30154 601 aa11.91□□□□□ -0.5
CDC42BPA-202ENST00000366764 TALDO1P37837 337 aa11.91□□□□□ -0.5
CDC42BPA-202ENST00000366764 DSELQ8IZU8 1212 aa11.91□□□□□ -0.5
CDC42BPA-202ENST00000366764 FBXL18Q96ME1 805 aa11.91□□□□□ -0.5
CDC42BPA-202ENST00000366764 CPXM1Q96SM3 734 aa11.91□□□□□ -0.5
CDC42BPA-202ENST00000366764 ARAP2Q8WZ64 1704 aa11.91□□□□□ -0.5
CDC42BPA-202ENST00000366764 A8MUI8 341 aa11.91□□□□□ -0.5
CDC42BPA-202ENST00000366764 CMPK2Q5EBM0 449 aa11.91□□□□□ -0.5
CDC42BPA-202ENST00000366764 ZNF549Q6P9A3 640 aa11.91□□□□□ -0.5
CDC42BPA-202ENST00000366764 NPNTQ6UXI9 565 aa11.91□□□□□ -0.5
CDC42BPA-202ENST00000366764 CATSPERGQ6ZRH7 1159 aa11.91□□□□□ -0.5
CDC42BPA-202ENST00000366764 ZFAND2BQ8WV99 257 aa11.91□□□□□ -0.5
CDC42BPA-202ENST00000366764 KCNH4Q9UQ05 1017 aa11.91□□□□□ -0.5
CDC42BPA-202ENST00000366764 GPIP06744 558 aa11.91□□□□□ -0.5
CDC42BPA-202ENST00000366764 ZNF12P17014 697 aa11.91□□□□□ -0.5
CDC42BPA-202ENST00000366764 NFKB1P19838 968 aa11.91□□□□□ -0.5
CDC42BPA-202ENST00000366764 RPS6KA3P51812 740 aa11.91□□□□□ -0.5
CDC42BPA-202ENST00000366764 WDR4P57081 412 aaKnown RBP11.91□□□□□ -0.5
CDC42BPA-202ENST00000366764 RAB14P61106 215 aa11.91□□□□□ -0.5
CDC42BPA-202ENST00000366764 ATP1A4Q13733 1029 aa11.91□□□□□ -0.5
CDC42BPA-202ENST00000366764 RNF148Q8N7C7 305 aa11.91□□□□□ -0.5
CDC42BPA-202ENST00000366764 L3MBTL3Q96JM7 780 aaPredicted RBP11.91□□□□□ -0.5
CDC42BPA-202ENST00000366764 ZCWPW1Q9H0M4 648 aa11.91□□□□□ -0.5
CDC42BPA-202ENST00000366764 SNTG2Q9NY99 539 aa11.91□□□□□ -0.5
CDC42BPA-202ENST00000366764 UTP6Q9NYH9 597 aaKnown RBP11.91□□□□□ -0.5
CDC42BPA-202ENST00000366764 ATG7O95352 703 aa11.91□□□□□ -0.5
CDC42BPA-202ENST00000366764 LGALS2P05162 132 aa11.91□□□□□ -0.5
CDC42BPA-202ENST00000366764 ZYG11AQ6WRX3 759 aa11.91□□□□□ -0.5
CDC42BPA-202ENST00000366764 XYLT1Q86Y38 959 aa11.91□□□□□ -0.5
CDC42BPA-202ENST00000366764 SLC35B2Q8TB61 432 aa11.91□□□□□ -0.5
CDC42BPA-202ENST00000366764 REEP1Q9H902 201 aa11.91□□□□□ -0.5
CDC42BPA-202ENST00000366764 NWD2Q9ULI1 1742 aa11.91□□□□□ -0.5
CDC42BPA-202ENST00000366764 PRRG1O14668 218 aa11.91□□□□□ -0.5
CDC42BPA-202ENST00000366764 PTPRAP18433 802 aa11.91□□□□□ -0.5
CDC42BPA-202ENST00000366764 PSMB9P28065 219 aa11.91□□□□□ -0.5
CDC42BPA-202ENST00000366764 ARL2P36404 184 aa11.91□□□□□ -0.5
CDC42BPA-202ENST00000366764 CCNHP51946 323 aaPredicted RBP11.91□□□□□ -0.5
CDC42BPA-202ENST00000366764 LIMK2P53671 638 aa11.91□□□□□ -0.5
CDC42BPA-202ENST00000366764 EFEMP1Q12805 493 aa11.91□□□□□ -0.5
CDC42BPA-202ENST00000366764 CCDC85BQ15834 202 aaPredicted RBP11.91□□□□□ -0.5
CDC42BPA-202ENST00000366764 OSMRQ99650 979 aa11.91□□□□□ -0.5
CDC42BPA-202ENST00000366764 FBXO5Q9UKT4 447 aa11.91□□□□□ -0.5
CDC42BPA-202ENST00000366764 SH3BP1Q9Y3L3 701 aa11.91□□□□□ -0.5
CDC42BPA-202ENST00000366764 FANCGO15287 622 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms