RNA–Protein interactions for RNA: ENST00000361168.9

CLK2-202, Transcript of CDC like kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLK2, Length 1,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-202ENST00000361168 PRR33A8MZF0 331 aa18.15■□□□□ 0.5
CLK2-202ENST00000361168 ESPNB1AK53 854 aa18.15■□□□□ 0.5
CLK2-202ENST00000361168 ATG13O75143 517 aa18.15■□□□□ 0.5
CLK2-202ENST00000361168 LEFTY1O75610 366 aa18.15■□□□□ 0.5
CLK2-202ENST00000361168 URI1O94763 535 aaPredicted RBP18.15■□□□□ 0.5
CLK2-202ENST00000361168 PIGNO95427 931 aa18.15■□□□□ 0.5
CLK2-202ENST00000361168 CR2P20023 1033 aa18.15■□□□□ 0.5
CLK2-202ENST00000361168 ITKQ08881 620 aa18.15■□□□□ 0.5
CLK2-202ENST00000361168 NIPAL4Q0D2K0 466 aa18.15■□□□□ 0.5
CLK2-202ENST00000361168 RFTN1Q14699 578 aaPredicted RBP18.15■□□□□ 0.5
CLK2-202ENST00000361168 STARD3Q14849 445 aa18.15■□□□□ 0.5
CLK2-202ENST00000361168 CCNG2Q16589 344 aa18.15■□□□□ 0.5
CLK2-202ENST00000361168 TEX44Q53QW1 395 aa18.15■□□□□ 0.5
CLK2-202ENST00000361168 ARSIQ5FYB1 569 aa18.15■□□□□ 0.5
CLK2-202ENST00000361168 C1orf210Q8IVY1 113 aa18.15■□□□□ 0.5
CLK2-202ENST00000361168 DTWD2Q8NBA8 298 aa18.15■□□□□ 0.5
CLK2-202ENST00000361168 CCDC110Q8TBZ0 833 aa18.15■□□□□ 0.5
CLK2-202ENST00000361168 NKD2Q969F2 451 aaPredicted RBP18.15■□□□□ 0.5
CLK2-202ENST00000361168 MGME1Q9BQP7 344 aa18.15■□□□□ 0.5
CLK2-202ENST00000361168 LRFN3Q9BTN0 628 aa18.15■□□□□ 0.5
CLK2-202ENST00000361168 SERGEFQ9UGK8 458 aa18.15■□□□□ 0.5
CLK2-202ENST00000361168 SUN2Q9UH99 717 aa18.15■□□□□ 0.5
CLK2-202ENST00000361168 ZNF148Q9UQR1 794 aa18.15■□□□□ 0.5
CLK2-202ENST00000361168 CXorf51AA0A1B0GTR3 108 aa18.14■□□□□ 0.49
CLK2-202ENST00000361168 BCLAF3A2AJT9 711 aaKnown RBP18.14■□□□□ 0.49
CLK2-202ENST00000361168 HACD1B0YJ81 288 aa18.14■□□□□ 0.49
CLK2-202ENST00000361168 IL1BP01584 269 aa18.14■□□□□ 0.49
CLK2-202ENST00000361168 ZSCAN5DPP0CG00 497 aa18.14■□□□□ 0.49
CLK2-202ENST00000361168 DGKEP52429 567 aa18.14■□□□□ 0.49
CLK2-202ENST00000361168 ZNF33AQ06730 810 aa18.14■□□□□ 0.49
CLK2-202ENST00000361168 ELAVL3Q14576 367 aaKnown RBP18.14■□□□□ 0.49
CLK2-202ENST00000361168 MYLK3Q32MK0 819 aa18.14■□□□□ 0.49
CLK2-202ENST00000361168 HSF5Q4G112 596 aaPredicted RBP18.14■□□□□ 0.49
CLK2-202ENST00000361168 CAMK1DQ8IU85 385 aa18.14■□□□□ 0.49
CLK2-202ENST00000361168 SPATA22Q8NHS9 363 aa18.14■□□□□ 0.49
CLK2-202ENST00000361168 ARRDC2Q8TBH0 407 aa18.14■□□□□ 0.49
CLK2-202ENST00000361168 NSMCE1Q8WV22 266 aa18.14■□□□□ 0.49
CLK2-202ENST00000361168 CASKIN2Q8WXE0 1202 aa18.14■□□□□ 0.49
CLK2-202ENST00000361168 FATE1Q969F0 183 aa18.14■□□□□ 0.49
CLK2-202ENST00000361168 SEMA3CQ99985 751 aa18.14■□□□□ 0.49
CLK2-202ENST00000361168 BRD8Q9H0E9 1235 aa18.14■□□□□ 0.49
CLK2-202ENST00000361168 RSPH9Q9H1X1 276 aaPredicted RBP18.14■□□□□ 0.49
CLK2-202ENST00000361168 UBP1Q9NZI7 540 aa18.14■□□□□ 0.49
CLK2-202ENST00000361168 EBF1Q9UH73 591 aa18.14■□□□□ 0.49
CLK2-202ENST00000361168 PPM1HQ9ULR3 514 aa18.14■□□□□ 0.49
CLK2-202ENST00000361168 SLC8A2Q9UPR5 921 aa18.14■□□□□ 0.49
CLK2-202ENST00000361168 ATP8A1Q9Y2Q0 1164 aa18.14■□□□□ 0.49
CLK2-202ENST00000361168 TARSL2A2RTX5 802 aaKnown RBP18.13■□□□□ 0.49
CLK2-202ENST00000361168 CHRNA3P32297 505 aa18.13■□□□□ 0.49
CLK2-202ENST00000361168 PSMD8P48556 350 aa18.13■□□□□ 0.49
CLK2-202ENST00000361168 TSTD1Q8NFU3 115 aa18.13■□□□□ 0.49
CLK2-202ENST00000361168 OR2T3Q8NH03 318 aa18.13■□□□□ 0.49
CLK2-202ENST00000361168 TEKT5Q96M29 485 aa18.13■□□□□ 0.49
CLK2-202ENST00000361168 GDAP1L1Q96MZ0 367 aa18.13■□□□□ 0.49
CLK2-202ENST00000361168 GORASP1Q9BQQ3 440 aa18.13■□□□□ 0.49
CLK2-202ENST00000361168 DDX47Q9H0S4 455 aaKnown RBP18.13■□□□□ 0.49
CLK2-202ENST00000361168 PCDHGC4Q9Y5F7 938 aa18.13■□□□□ 0.49
CLK2-202ENST00000361168 MID1O15344 667 aa18.13■□□□□ 0.49
CLK2-202ENST00000361168 MT-CYBP00156 380 aaPredicted RBP18.13■□□□□ 0.49
CLK2-202ENST00000361168 MMP2P08253 660 aa18.13■□□□□ 0.49
CLK2-202ENST00000361168 RPS14P62263 151 aaKnown RBP18.13■□□□□ 0.49
CLK2-202ENST00000361168 SNRPD1P62314 119 aaKnown RBP18.13■□□□□ 0.49
CLK2-202ENST00000361168 MRPS25P82663 173 aaKnown RBP18.13■□□□□ 0.49
CLK2-202ENST00000361168 PID1Q7Z2X4 250 aa18.13■□□□□ 0.49
CLK2-202ENST00000361168 ZSWIM9Q86XI8 627 aa18.13■□□□□ 0.49
CLK2-202ENST00000361168 CDKL3Q8IVW4 592 aaPredicted RBP18.13■□□□□ 0.49
CLK2-202ENST00000361168 RLN3Q8WXF3 142 aa18.13■□□□□ 0.49
CLK2-202ENST00000361168 MAGOHBQ96A72 148 aaKnown RBP18.13■□□□□ 0.49
CLK2-202ENST00000361168 NUMA1Q14980 2115 aa18.13■□□□□ 0.49
CLK2-202ENST00000361168 IGSF6O95976 241 aa18.12■□□□□ 0.49
CLK2-202ENST00000361168 GSRP00390 522 aa18.12■□□□□ 0.49
CLK2-202ENST00000361168 IFNB1P01574 187 aa18.12■□□□□ 0.49
CLK2-202ENST00000361168 UGT2B4P06133 528 aa18.12■□□□□ 0.49
CLK2-202ENST00000361168 NFKB1P19838 968 aa18.12■□□□□ 0.49
CLK2-202ENST00000361168 RECQLP46063 649 aaPredicted RBP18.12■□□□□ 0.49
CLK2-202ENST00000361168 CCR3P51677 355 aa18.12■□□□□ 0.49
CLK2-202ENST00000361168 PTPRRQ15256 657 aa18.12■□□□□ 0.49
CLK2-202ENST00000361168 LRRC73Q5JTD7 316 aa18.12■□□□□ 0.49
CLK2-202ENST00000361168 ANKRD20A2Q5SQ80 823 aa18.12■□□□□ 0.49
CLK2-202ENST00000361168 ANKRD20A1Q5TYW2 823 aa18.12■□□□□ 0.49
CLK2-202ENST00000361168 ANKRD20A3Q5VUR7 823 aa18.12■□□□□ 0.49
CLK2-202ENST00000361168 SRLQ86TD4 932 aa18.12■□□□□ 0.49
CLK2-202ENST00000361168 PRPF39Q86UA1 669 aaKnown RBP18.12■□□□□ 0.49
CLK2-202ENST00000361168 PGBD3Q8N328 593 aa18.12■□□□□ 0.49
CLK2-202ENST00000361168 AADATQ8N5Z0 425 aa18.12■□□□□ 0.49
CLK2-202ENST00000361168 FAM160A2Q8N612 972 aaPredicted RBP18.12■□□□□ 0.49
CLK2-202ENST00000361168 OR8D1Q8WZ84 308 aa18.12■□□□□ 0.49
CLK2-202ENST00000361168 RBM15Q96T37 977 aaKnown RBP eCLIP18.12■□□□□ 0.495e-11■□□□□ 9.9
CLK2-202ENST00000361168 HEPHQ9BQS7 1158 aa18.12■□□□□ 0.49
CLK2-202ENST00000361168 KLHL8Q9P2G9 620 aaPredicted RBP18.12■□□□□ 0.49
CLK2-202ENST00000361168 IL36AQ9UHA7 158 aa18.12■□□□□ 0.49
CLK2-202ENST00000361168 INVSQ9Y283 1065 aa18.12■□□□□ 0.49
CLK2-202ENST00000361168 SDK1Q7Z5N4 2213 aa18.12■□□□□ 0.49
CLK2-202ENST00000361168 LAMTOR5O43504 91 aa18.11■□□□□ 0.49
CLK2-202ENST00000361168 ZNF500O60304 480 aaPredicted RBP18.11■□□□□ 0.49
CLK2-202ENST00000361168 TDGF1P13385 188 aa18.11■□□□□ 0.49
CLK2-202ENST00000361168 CSTF1Q05048 431 aaKnown RBP18.11■□□□□ 0.49
CLK2-202ENST00000361168 NSUN2Q08J23 767 aaKnown RBP eCLIP18.11■□□□□ 0.49
CLK2-202ENST00000361168 TRIP13Q15645 432 aaPredicted RBP18.11■□□□□ 0.49
CLK2-202ENST00000361168 CST6Q15828 149 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms