RNA–Protein interactions for RNA: ENST00000359253.2

CCDC197-201, Transcript of coiled-coil domain containing 197, humanhuman

TSL 1 (best)

Gene CCDC197, Length 1,275 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-201ENST00000359253 GYS2P54840 703 aa13.69□□□□□ -0.22
CCDC197-201ENST00000359253 SLC20A2Q08357 652 aa13.69□□□□□ -0.22
CCDC197-201ENST00000359253 ITKQ08881 620 aa13.69□□□□□ -0.22
CCDC197-201ENST00000359253 NSUN2Q08J23 767 aaKnown RBP eCLIP13.69□□□□□ -0.22
CCDC197-201ENST00000359253 SMAD4Q13485 552 aaKnown RBP13.69□□□□□ -0.22
CCDC197-201ENST00000359253 KBTBD12Q3ZCT8 623 aa13.69□□□□□ -0.22
CCDC197-201ENST00000359253 FYB2Q5VWT5 728 aa13.69□□□□□ -0.22
CCDC197-201ENST00000359253 CAPN12Q6ZSI9 719 aa13.69□□□□□ -0.22
CCDC197-201ENST00000359253 NLRP9Q7RTR0 991 aa13.69□□□□□ -0.22
CCDC197-201ENST00000359253 GPR149Q86SP6 731 aa13.69□□□□□ -0.22
CCDC197-201ENST00000359253 TRABD2AQ86V40 505 aa13.69□□□□□ -0.22
CCDC197-201ENST00000359253 CIR1Q86X95 450 aaPredicted RBP13.69□□□□□ -0.22
CCDC197-201ENST00000359253 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.69□□□□□ -0.22
CCDC197-201ENST00000359253 TDRD5Q8NAT2 981 aaKnown RBP13.69□□□□□ -0.22
CCDC197-201ENST00000359253 DCAKDQ8WVC6 231 aa13.69□□□□□ -0.22
CCDC197-201ENST00000359253 ACDQ96AP0 544 aa13.69□□□□□ -0.22
CCDC197-201ENST00000359253 ZBTB9Q96C00 473 aa13.69□□□□□ -0.22
CCDC197-201ENST00000359253 MYEOVQ96EZ4 313 aa13.69□□□□□ -0.22
CCDC197-201ENST00000359253 RIPOR3Q96MK2 946 aa13.69□□□□□ -0.22
CCDC197-201ENST00000359253 RANBP9Q96S59 729 aa13.69□□□□□ -0.22
CCDC197-201ENST00000359253 SMC6Q96SB8 1091 aa13.69□□□□□ -0.22
CCDC197-201ENST00000359253 KIFC1Q9BW19 673 aa13.69□□□□□ -0.22
CCDC197-201ENST00000359253 MUC3BQ9H195 1237 aa13.69□□□□□ -0.22
CCDC197-201ENST00000359253 NYNRINQ9P2P1 1898 aaKnown RBP13.68□□□□□ -0.22
CCDC197-201ENST00000359253 CCDC195A0A1B0GUA6 201 aa13.68□□□□□ -0.22
CCDC197-201ENST00000359253 SLC9A3R1O14745 358 aaPredicted RBP13.68□□□□□ -0.22
CCDC197-201ENST00000359253 PRPF4O43172 522 aaKnown RBP eCLIP13.68□□□□□ -0.22
CCDC197-201ENST00000359253 MBTPS2O43462 519 aa13.68□□□□□ -0.22
CCDC197-201ENST00000359253 TSPAN3O60637 253 aa13.68□□□□□ -0.22
CCDC197-201ENST00000359253 C1QAP02745 245 aa13.68□□□□□ -0.22
CCDC197-201ENST00000359253 SERPINF2P08697 491 aa13.68□□□□□ -0.22
CCDC197-201ENST00000359253 SNRPAP09012 282 aaKnown RBP13.68□□□□□ -0.22
CCDC197-201ENST00000359253 BMP1P13497 986 aa13.68□□□□□ -0.22
CCDC197-201ENST00000359253 PAMP19021 973 aa13.68□□□□□ -0.22
CCDC197-201ENST00000359253 ADRA1DP25100 572 aa13.68□□□□□ -0.22
CCDC197-201ENST00000359253 MTHFRP42898 656 aa13.68□□□□□ -0.22
CCDC197-201ENST00000359253 PLK1P53350 603 aa13.68□□□□□ -0.22
CCDC197-201ENST00000359253 WNT3AP56704 352 aa13.68□□□□□ -0.22
CCDC197-201ENST00000359253 MGAT5Q09328 741 aa13.68□□□□□ -0.22
CCDC197-201ENST00000359253 CDH18Q13634 790 aa13.68□□□□□ -0.22
CCDC197-201ENST00000359253 SPARCL1Q14515 664 aa13.68□□□□□ -0.22
CCDC197-201ENST00000359253 CRYMQ14894 314 aa13.68□□□□□ -0.22
CCDC197-201ENST00000359253 TMED2Q15363 201 aa13.68□□□□□ -0.22
CCDC197-201ENST00000359253 SMAD2Q15796 467 aaKnown RBP13.68□□□□□ -0.22
CCDC197-201ENST00000359253 SKIDA1Q1XH10 827 aa13.68□□□□□ -0.22
CCDC197-201ENST00000359253 PRSS36Q5K4E3 855 aa13.68□□□□□ -0.22
CCDC197-201ENST00000359253 RNF219Q5W0B1 726 aaPredicted RBP13.68□□□□□ -0.22
CCDC197-201ENST00000359253 CXorf57Q6NSI4 855 aaKnown RBP13.68□□□□□ -0.22
CCDC197-201ENST00000359253 KDELC1Q6UW63 502 aa13.68□□□□□ -0.22
CCDC197-201ENST00000359253 MARK2Q7KZI7 788 aaKnown RBP13.68□□□□□ -0.22
CCDC197-201ENST00000359253 PRPF39Q86UA1 669 aaKnown RBP13.68□□□□□ -0.22
CCDC197-201ENST00000359253 MPP5Q8N3R9 675 aa13.68□□□□□ -0.22
CCDC197-201ENST00000359253 DCAF4L2Q8NA75 395 aa13.68□□□□□ -0.22
CCDC197-201ENST00000359253 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.68□□□□□ -0.22
CCDC197-201ENST00000359253 PPHLN1Q8NEY8 458 aaKnown RBP13.68□□□□□ -0.22
CCDC197-201ENST00000359253 IPMKQ8NFU5 416 aa13.68□□□□□ -0.22
CCDC197-201ENST00000359253 SPATA22Q8NHS9 363 aa13.68□□□□□ -0.22
CCDC197-201ENST00000359253 FIBINQ8TAL6 211 aa13.68□□□□□ -0.22
CCDC197-201ENST00000359253 SUSD6Q92537 303 aa13.68□□□□□ -0.22
CCDC197-201ENST00000359253 PEX13Q92968 403 aa13.68□□□□□ -0.22
CCDC197-201ENST00000359253 FEM1CQ96JP0 617 aa13.68□□□□□ -0.22
CCDC197-201ENST00000359253 MRGPRX2Q96LB1 330 aa13.68□□□□□ -0.22
CCDC197-201ENST00000359253 MGME1Q9BQP7 344 aa13.68□□□□□ -0.22
CCDC197-201ENST00000359253 SPON2Q9BUD6 331 aa13.68□□□□□ -0.22
CCDC197-201ENST00000359253 C2orf49Q9BVC5 232 aaPredicted RBP13.68□□□□□ -0.22
CCDC197-201ENST00000359253 CINPQ9BW66 212 aaPredicted RBP13.68□□□□□ -0.22
CCDC197-201ENST00000359253 PRDM6Q9NQX0 595 aa13.68□□□□□ -0.22
CCDC197-201ENST00000359253 TDP1Q9NUW8 608 aa13.68□□□□□ -0.22
CCDC197-201ENST00000359253 SYBUQ9NX95 663 aa13.68□□□□□ -0.22
CCDC197-201ENST00000359253 KIAA1522Q9P206 1035 aaPredicted RBP13.68□□□□□ -0.22
CCDC197-201ENST00000359253 PRKAG3Q9UGI9 489 aa13.68□□□□□ -0.22
CCDC197-201ENST00000359253 TBK1Q9UHD2 729 aa13.68□□□□□ -0.22
CCDC197-201ENST00000359253 RPS6KL1Q9Y6S9 549 aa13.68□□□□□ -0.22
CCDC197-201ENST00000359253 CHD5Q8TDI0 1954 aa13.68□□□□□ -0.22
CCDC197-201ENST00000359253 SHROOM3Q8TF72 1996 aa13.67□□□□□ -0.22
CCDC197-201ENST00000359253 A0A0D9SEW6 157 aa13.67□□□□□ -0.22
CCDC197-201ENST00000359253 LOC285095A0A1B0GVY8 99 aa13.67□□□□□ -0.22
CCDC197-201ENST00000359253 H3BQ06 376 aaPredicted RBP13.67□□□□□ -0.22
CCDC197-201ENST00000359253 MOSPD3O75425 235 aa13.67□□□□□ -0.22
CCDC197-201ENST00000359253 RFPL2O75678 378 aa13.67□□□□□ -0.22
CCDC197-201ENST00000359253 PAPSS2O95340 614 aaPredicted RBP13.67□□□□□ -0.22
CCDC197-201ENST00000359253 MT-CYBP00156 380 aaPredicted RBP13.67□□□□□ -0.22
CCDC197-201ENST00000359253 BRAFP15056 766 aa13.67□□□□□ -0.22
CCDC197-201ENST00000359253 HLA-DPA1P20036 260 aa13.67□□□□□ -0.22
CCDC197-201ENST00000359253 CA4P22748 312 aa13.67□□□□□ -0.22
CCDC197-201ENST00000359253 ATP1A2P50993 1020 aa13.67□□□□□ -0.22
CCDC197-201ENST00000359253 ZXDBP98169 803 aa13.67□□□□□ -0.22
CCDC197-201ENST00000359253 TEAD2Q15562 447 aa13.67□□□□□ -0.22
CCDC197-201ENST00000359253 ANKRD20A4Q4UJ75 823 aa13.67□□□□□ -0.22
CCDC197-201ENST00000359253 TJAP1Q5JTD0 557 aa13.67□□□□□ -0.22
CCDC197-201ENST00000359253 PTCRAQ6ISU1 281 aaPredicted RBP13.67□□□□□ -0.22
CCDC197-201ENST00000359253 RETSATQ6NUM9 610 aa13.67□□□□□ -0.22
CCDC197-201ENST00000359253 PKN3Q6P5Z2 889 aa13.67□□□□□ -0.22
CCDC197-201ENST00000359253 MFN1Q8IWA4 741 aa13.67□□□□□ -0.22
CCDC197-201ENST00000359253 CTAGE3PQ8IX95 158 aa13.67□□□□□ -0.22
CCDC197-201ENST00000359253 CARNMT1Q8N4J0 409 aa13.67□□□□□ -0.22
CCDC197-201ENST00000359253 OR7D4Q8NG98 312 aa13.67□□□□□ -0.22
CCDC197-201ENST00000359253 ARRDC2Q8TBH0 407 aa13.67□□□□□ -0.22
CCDC197-201ENST00000359253 SH3RF2Q8TEC5 729 aa13.67□□□□□ -0.22
CCDC197-201ENST00000359253 DDI1Q8WTU0 396 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms