RNA–Protein interactions for RNA: ENST00000359238.6

SNX11-201, Transcript of sorting nexin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX11, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-201ENST00000359238 ARPINQ7Z6K5 226 aa18.88■□□□□ 0.61
SNX11-201ENST00000359238 ZNF554Q86TJ5 538 aa18.88■□□□□ 0.61
SNX11-201ENST00000359238 PSTKQ8IV42 348 aaKnown RBP18.88■□□□□ 0.61
SNX11-201ENST00000359238 JADE3Q92613 823 aa18.88■□□□□ 0.61
SNX11-201ENST00000359238 SERAC1Q96JX3 654 aa18.88■□□□□ 0.61
SNX11-201ENST00000359238 PAK5Q9P286 719 aa18.88■□□□□ 0.61
SNX11-201ENST00000359238 RCOR3Q9P2K3 495 aaPredicted RBP18.88■□□□□ 0.61
SNX11-201ENST00000359238 CDY1Q9Y6F8 540 aa18.88■□□□□ 0.61
SNX11-201ENST00000359238 C5orf42Q9H799 3197 aa18.88■□□□□ 0.61
SNX11-201ENST00000359238 OR6C75A6NL08 312 aa18.88■□□□□ 0.61
SNX11-201ENST00000359238 CCNT2O60583 730 aaKnown RBP18.88■□□□□ 0.61
SNX11-201ENST00000359238 TFAP2AP05549 437 aa18.88■□□□□ 0.61
SNX11-201ENST00000359238 NR2C2P49116 596 aa18.88■□□□□ 0.61
SNX11-201ENST00000359238 DUSP4Q13115 394 aa18.88■□□□□ 0.61
SNX11-201ENST00000359238 PAFAH1B3Q15102 231 aaKnown RBP18.88■□□□□ 0.61
SNX11-201ENST00000359238 CDKL3Q8IVW4 592 aaPredicted RBP18.88■□□□□ 0.61
SNX11-201ENST00000359238 CCNYQ8ND76 341 aa18.88■□□□□ 0.61
SNX11-201ENST00000359238 TFB1MQ8WVM0 346 aaKnown RBP18.88■□□□□ 0.61
SNX11-201ENST00000359238 RNF34Q969K3 372 aa18.88■□□□□ 0.61
SNX11-201ENST00000359238 RBM38Q9H0Z9 239 aaKnown RBP18.88■□□□□ 0.61
SNX11-201ENST00000359238 NYNRINQ9P2P1 1898 aaKnown RBP18.87■□□□□ 0.61
SNX11-201ENST00000359238 CASQ2O14958 399 aaPredicted RBP18.87■□□□□ 0.61
SNX11-201ENST00000359238 MOCS2O96007 188 aaPredicted RBP18.87■□□□□ 0.61
SNX11-201ENST00000359238 PEX2P28328 305 aa18.87■□□□□ 0.61
SNX11-201ENST00000359238 ARHGAP36Q6ZRI8 547 aa18.87■□□□□ 0.61
SNX11-201ENST00000359238 NUP93Q8N1F7 819 aa18.87■□□□□ 0.61
SNX11-201ENST00000359238 SCML4Q8N228 414 aa18.87■□□□□ 0.61
SNX11-201ENST00000359238 MARVELD2Q8N4S9 558 aa18.87■□□□□ 0.61
SNX11-201ENST00000359238 TMEM199Q8N511 208 aa18.87■□□□□ 0.61
SNX11-201ENST00000359238 ZNF419Q96HQ0 510 aaPredicted RBP18.87■□□□□ 0.61
SNX11-201ENST00000359238 FUBP3Q96I24 572 aaKnown RBP eCLIP18.87■□□□□ 0.61
SNX11-201ENST00000359238 IGSF21Q96ID5 467 aa18.87■□□□□ 0.61
SNX11-201ENST00000359238 ZFRQ96KR1 1074 aaKnown RBP18.87■□□□□ 0.61
SNX11-201ENST00000359238 SEPT5Q99719 369 aaPredicted RBP18.87■□□□□ 0.61
SNX11-201ENST00000359238 PLK2Q9NYY3 685 aa18.87■□□□□ 0.61
SNX11-201ENST00000359238 RNF103O00237 685 aa18.86■□□□□ 0.61
SNX11-201ENST00000359238 GCATO75600 419 aa18.86■□□□□ 0.61
SNX11-201ENST00000359238 CLPTM1O96005 669 aa18.86■□□□□ 0.61
SNX11-201ENST00000359238 SERPINA6P08185 405 aa18.86■□□□□ 0.61
SNX11-201ENST00000359238 ZFXP17010 805 aaPredicted RBP18.86■□□□□ 0.61
SNX11-201ENST00000359238 FOLH1Q04609 750 aa18.86■□□□□ 0.61
SNX11-201ENST00000359238 DCTN2Q13561 401 aaKnown RBP18.86■□□□□ 0.61
SNX11-201ENST00000359238 FBXL19Q6PCT2 694 aa18.86■□□□□ 0.61
SNX11-201ENST00000359238 C14orf80Q86SX3 495 aa18.86■□□□□ 0.61
SNX11-201ENST00000359238 GIPC2Q8TF65 315 aa18.86■□□□□ 0.61
SNX11-201ENST00000359238 GAB3Q8WWW8 586 aa18.86■□□□□ 0.61
SNX11-201ENST00000359238 ZNF689Q96CS4 500 aaPredicted RBP18.86■□□□□ 0.61
SNX11-201ENST00000359238 ABCC13Q9NSE7 274 aa18.86■□□□□ 0.61
SNX11-201ENST00000359238 SORCS3Q9UPU3 1222 aa18.86■□□□□ 0.61
SNX11-201ENST00000359238 TEX264Q9Y6I9 313 aa18.86■□□□□ 0.61
SNX11-201ENST00000359238 PRR5-ARHGAP8B1AHC4 643 aa18.86■□□□□ 0.61
SNX11-201ENST00000359238 PAGE1O75459 146 aa18.86■□□□□ 0.61
SNX11-201ENST00000359238 AOC1P19801 751 aa18.86■□□□□ 0.61
SNX11-201ENST00000359238 NUMBP49757 651 aa18.86■□□□□ 0.61
SNX11-201ENST00000359238 EMP3P54852 163 aa18.86■□□□□ 0.61
SNX11-201ENST00000359238 ARHGAP8P85298 464 aa18.86■□□□□ 0.61
SNX11-201ENST00000359238 CCNIQ14094 377 aa18.86■□□□□ 0.61
SNX11-201ENST00000359238 BTG3Q14201 252 aaPredicted RBP18.86■□□□□ 0.61
SNX11-201ENST00000359238 MGAT5BQ3V5L5 792 aa18.86■□□□□ 0.61
SNX11-201ENST00000359238 ATG16L1Q676U5 607 aa18.86■□□□□ 0.61
SNX11-201ENST00000359238 ANKS3Q6ZW76 656 aa18.86■□□□□ 0.61
SNX11-201ENST00000359238 PALM2Q8IXS6 379 aa18.86■□□□□ 0.61
SNX11-201ENST00000359238 ZNF567Q8N184 647 aa18.86■□□□□ 0.61
SNX11-201ENST00000359238 ICA1LQ8NDH6 482 aa18.86■□□□□ 0.61
SNX11-201ENST00000359238 GFM2Q969S9 779 aaKnown RBP18.86■□□□□ 0.61
SNX11-201ENST00000359238 KLC2Q9H0B6 622 aa18.86■□□□□ 0.61
SNX11-201ENST00000359238 RC3H2Q9HBD1 1191 aaKnown RBP18.86■□□□□ 0.61
SNX11-201ENST00000359238 TMEM165Q9HC07 324 aa18.86■□□□□ 0.61
SNX11-201ENST00000359238 DMTF1Q9Y222 760 aa18.86■□□□□ 0.61
SNX11-201ENST00000359238 PTPRSQ13332 1948 aa18.86■□□□□ 0.61
SNX11-201ENST00000359238 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.85■□□□□ 0.61
SNX11-201ENST00000359238 WDR27A2RRH5 827 aa18.85■□□□□ 0.61
SNX11-201ENST00000359238 ARHGAP42A6NI28 874 aa18.85■□□□□ 0.61
SNX11-201ENST00000359238 TXNDC9O14530 226 aa18.85■□□□□ 0.61
SNX11-201ENST00000359238 CHADO15335 359 aa18.85■□□□□ 0.61
SNX11-201ENST00000359238 DENRO43583 198 aaKnown RBP18.85■□□□□ 0.61
SNX11-201ENST00000359238 ATF6P18850 670 aa18.85■□□□□ 0.61
SNX11-201ENST00000359238 CRADDP78560 199 aa18.85■□□□□ 0.61
SNX11-201ENST00000359238 ARID3BQ8IVW6 561 aaPredicted RBP18.85■□□□□ 0.61
SNX11-201ENST00000359238 ZBTB8BQ8NAP8 495 aaPredicted RBP18.85■□□□□ 0.61
SNX11-201ENST00000359238 SLC26A7Q8TE54 656 aa18.85■□□□□ 0.61
SNX11-201ENST00000359238 SMOC2Q9H3U7 446 aa18.85■□□□□ 0.61
SNX11-201ENST00000359238 ARHGEF38Q9NXL2 777 aa18.85■□□□□ 0.61
SNX11-201ENST00000359238 CHD9Q3L8U1 2897 aa18.85■□□□□ 0.61
SNX11-201ENST00000359238 ZBBXA8MT70 800 aa18.85■□□□□ 0.61
SNX11-201ENST00000359238 HNRNPCP07910 306 aaKnown RBP eCLIP18.85■□□□□ 0.61
SNX11-201ENST00000359238 PSMB4P28070 264 aa18.85■□□□□ 0.61
SNX11-201ENST00000359238 MAGEA10P43363 369 aaPredicted RBP18.85■□□□□ 0.61
SNX11-201ENST00000359238 GPR17Q13304 367 aa18.85■□□□□ 0.61
SNX11-201ENST00000359238 USP41Q3LFD5 358 aa18.85■□□□□ 0.61
SNX11-201ENST00000359238 DUS1LQ6P1R4 473 aaKnown RBP18.85■□□□□ 0.61
SNX11-201ENST00000359238 RNF168Q8IYW5 571 aaPredicted RBP18.85■□□□□ 0.61
SNX11-201ENST00000359238 PDIK1LQ8N165 341 aa18.85■□□□□ 0.61
SNX11-201ENST00000359238 FBXO22Q8NEZ5 403 aa18.85■□□□□ 0.61
SNX11-201ENST00000359238 MRPS26Q9BYN8 205 aaKnown RBP18.85■□□□□ 0.61
SNX11-201ENST00000359238 LTBP2Q14767 1821 aa18.85■□□□□ 0.61
SNX11-201ENST00000359238 TMEM221A6NGB7 291 aa18.84■□□□□ 0.61
SNX11-201ENST00000359238 H7C4K7 107 aa18.84■□□□□ 0.61
SNX11-201ENST00000359238 EFEMP2O95967 443 aa18.84■□□□□ 0.61
SNX11-201ENST00000359238 F9P00740 461 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms