RNA–Protein interactions for RNA: ENST00000359175.8

SPTSSB-201, Transcript of serine palmitoyltransferase small subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSB, Length 3,103 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSB-201ENST00000359175 TNS4Q8IZW8 715 aa13.46□□□□□ -0.25
SPTSSB-201ENST00000359175 NGLY1Q96IV0 654 aa13.46□□□□□ -0.25
SPTSSB-201ENST00000359175 SLC45A3Q96JT2 553 aa13.46□□□□□ -0.25
SPTSSB-201ENST00000359175 FUNDC2Q9BWH2 189 aa13.46□□□□□ -0.25
SPTSSB-201ENST00000359175 GATA5Q9BWX5 397 aaPredicted RBP13.46□□□□□ -0.25
SPTSSB-201ENST00000359175 C12orf10Q9HB07 376 aa13.46□□□□□ -0.25
SPTSSB-201ENST00000359175 SMPD3Q9NY59 655 aaPredicted RBP13.46□□□□□ -0.25
SPTSSB-201ENST00000359175 ARHGAP28Q9P2N2 729 aa13.46□□□□□ -0.25
SPTSSB-201ENST00000359175 ISPDA4D126 451 aa13.46□□□□□ -0.25
SPTSSB-201ENST00000359175 KCNU1A8MYU2 1149 aa13.46□□□□□ -0.25
SPTSSB-201ENST00000359175 KCNN4O15554 427 aa13.46□□□□□ -0.25
SPTSSB-201ENST00000359175 BMP4P12644 408 aa13.46□□□□□ -0.25
SPTSSB-201ENST00000359175 TFEBP19484 476 aa13.46□□□□□ -0.25
SPTSSB-201ENST00000359175 STILQ15468 1287 aa13.46□□□□□ -0.25
SPTSSB-201ENST00000359175 CYP4A22Q5TCH4 519 aa13.46□□□□□ -0.25
SPTSSB-201ENST00000359175 KIAA0319LQ8IZA0 1049 aa13.46□□□□□ -0.25
SPTSSB-201ENST00000359175 GPD1LQ8N335 351 aa13.46□□□□□ -0.25
SPTSSB-201ENST00000359175 ASCC1Q8N9N2 400 aaKnown RBP13.46□□□□□ -0.25
SPTSSB-201ENST00000359175 SLC7A14Q8TBB6 771 aa13.46□□□□□ -0.25
SPTSSB-201ENST00000359175 CENPNQ96H22 339 aaPredicted RBP13.46□□□□□ -0.25
SPTSSB-201ENST00000359175 ZNF518BQ9C0D4 1074 aa13.46□□□□□ -0.25
SPTSSB-201ENST00000359175 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.46□□□□□ -0.25
SPTSSB-201ENST00000359175 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.46□□□□□ -0.25
SPTSSB-201ENST00000359175 TMEM181Q9P2C4 612 aa13.46□□□□□ -0.25
SPTSSB-201ENST00000359175 EIF3LQ9Y262 564 aaKnown RBP13.46□□□□□ -0.25
SPTSSB-201ENST00000359175 SYCE1LA8MT33 242 aa13.46□□□□□ -0.26
SPTSSB-201ENST00000359175 CHRNGP07510 517 aa13.46□□□□□ -0.26
SPTSSB-201ENST00000359175 M6PRP20645 277 aa13.46□□□□□ -0.26
SPTSSB-201ENST00000359175 MAGEA12P43365 314 aa13.46□□□□□ -0.26
SPTSSB-201ENST00000359175 CRKLP46109 303 aaKnown RBP13.46□□□□□ -0.26
SPTSSB-201ENST00000359175 RARRES1P49788 294 aa13.46□□□□□ -0.26
SPTSSB-201ENST00000359175 SLC26A2P50443 739 aa13.46□□□□□ -0.26
SPTSSB-201ENST00000359175 ADARB1P78563 741 aaKnown RBP13.46□□□□□ -0.26
SPTSSB-201ENST00000359175 MMRN1Q13201 1228 aa13.46□□□□□ -0.26
SPTSSB-201ENST00000359175 GPR162Q16538 588 aa13.46□□□□□ -0.26
SPTSSB-201ENST00000359175 TBCELQ5QJ74 424 aa13.46□□□□□ -0.26
SPTSSB-201ENST00000359175 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.46□□□□□ -0.26
SPTSSB-201ENST00000359175 SLC39A4Q6P5W5 647 aa13.46□□□□□ -0.26
SPTSSB-201ENST00000359175 SCML4Q8N228 414 aa13.46□□□□□ -0.26
SPTSSB-201ENST00000359175 FAM110BQ8TC76 370 aa13.46□□□□□ -0.26
SPTSSB-201ENST00000359175 OSCP1Q8WVF1 389 aa13.46□□□□□ -0.26
SPTSSB-201ENST00000359175 FAM84AQ96KN4 292 aa13.46□□□□□ -0.26
SPTSSB-201ENST00000359175 SNX18Q96RF0 628 aa13.46□□□□□ -0.26
SPTSSB-201ENST00000359175 ZBED2Q9BTP6 218 aa13.46□□□□□ -0.26
SPTSSB-201ENST00000359175 TEKT3Q9BXF9 490 aa13.46□□□□□ -0.26
SPTSSB-201ENST00000359175 SLC38A10Q9HBR0 1119 aa13.46□□□□□ -0.26
SPTSSB-201ENST00000359175 APOBEC3GQ9HC16 384 aaKnown RBP13.46□□□□□ -0.26
SPTSSB-201ENST00000359175 POLE4Q9NR33 117 aa13.46□□□□□ -0.26
SPTSSB-201ENST00000359175 MTMR10Q9NXD2 777 aa13.46□□□□□ -0.26
SPTSSB-201ENST00000359175 CACNA2D2Q9NY47 1150 aa13.46□□□□□ -0.26
SPTSSB-201ENST00000359175 TXNDC16Q9P2K2 825 aa13.46□□□□□ -0.26
SPTSSB-201ENST00000359175 RGPD3A6NKT7 1758 aaPredicted RBP13.45□□□□□ -0.26
SPTSSB-201ENST00000359175 RGPD4Q7Z3J3 1758 aa13.45□□□□□ -0.26
SPTSSB-201ENST00000359175 TAF4O00268 1085 aa13.45□□□□□ -0.26
SPTSSB-201ENST00000359175 ZBTB7AO95365 584 aa13.45□□□□□ -0.26
SPTSSB-201ENST00000359175 C4BPAP04003 597 aaKnown RBP13.45□□□□□ -0.26
SPTSSB-201ENST00000359175 ITIH1P19827 911 aa13.45□□□□□ -0.26
SPTSSB-201ENST00000359175 TPSB2P20231 275 aa13.45□□□□□ -0.26
SPTSSB-201ENST00000359175 EEF1B2P24534 225 aaKnown RBP13.45□□□□□ -0.26
SPTSSB-201ENST00000359175 FASP25445 335 aa13.45□□□□□ -0.26
SPTSSB-201ENST00000359175 CASP3P42574 277 aa13.45□□□□□ -0.26
SPTSSB-201ENST00000359175 PPP2R2BQ00005 443 aa13.45□□□□□ -0.26
SPTSSB-201ENST00000359175 SNX17Q15036 470 aa13.45□□□□□ -0.26
SPTSSB-201ENST00000359175 TPSAB1Q15661 275 aa13.45□□□□□ -0.26
SPTSSB-201ENST00000359175 VPS72Q15906 364 aa13.45□□□□□ -0.26
SPTSSB-201ENST00000359175 CARTPTQ16568 116 aa13.45□□□□□ -0.26
SPTSSB-201ENST00000359175 NXNQ6DKJ4 435 aa13.45□□□□□ -0.26
SPTSSB-201ENST00000359175 TMEM35BQ8NCS4 154 aa13.45□□□□□ -0.26
SPTSSB-201ENST00000359175 TMEM161BQ8NDZ6 487 aa13.45□□□□□ -0.26
SPTSSB-201ENST00000359175 ISL2Q96A47 359 aa13.45□□□□□ -0.26
SPTSSB-201ENST00000359175 MARK4Q96L34 752 aa13.45□□□□□ -0.26
SPTSSB-201ENST00000359175 ZNF577Q9BSK1 485 aa13.45□□□□□ -0.26
SPTSSB-201ENST00000359175 SLC17A6Q9P2U8 582 aa13.45□□□□□ -0.26
SPTSSB-201ENST00000359175 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.45□□□□□ -0.26
SPTSSB-201ENST00000359175 CCRL2O00421 344 aa13.45□□□□□ -0.26
SPTSSB-201ENST00000359175 TOMM70O94826 608 aa13.45□□□□□ -0.26
SPTSSB-201ENST00000359175 GARTP22102 1010 aa13.45□□□□□ -0.26
SPTSSB-201ENST00000359175 TBXAS1P24557 533 aaPredicted RBP13.45□□□□□ -0.26
SPTSSB-201ENST00000359175 SHMT1P34896 483 aa13.45□□□□□ -0.26
SPTSSB-201ENST00000359175 ZNF132P52740 706 aa13.45□□□□□ -0.26
SPTSSB-201ENST00000359175 PRKAA1Q13131 559 aa13.45□□□□□ -0.26
SPTSSB-201ENST00000359175 NFE2Q16621 373 aaPredicted RBP13.45□□□□□ -0.26
SPTSSB-201ENST00000359175 LRRC8EQ6NSJ5 796 aa13.45□□□□□ -0.26
SPTSSB-201ENST00000359175 GK5Q6ZS86 529 aa13.45□□□□□ -0.26
SPTSSB-201ENST00000359175 SLC51BQ86UW2 128 aa13.45□□□□□ -0.26
SPTSSB-201ENST00000359175 OSTM1Q86WC4 334 aa13.45□□□□□ -0.26
SPTSSB-201ENST00000359175 FTHL17Q9BXU8 183 aa13.45□□□□□ -0.26
SPTSSB-201ENST00000359175 CALN1Q9BXU9 219 aa13.45□□□□□ -0.26
SPTSSB-201ENST00000359175 CCDC177Q9NQR7 707 aaPredicted RBP13.45□□□□□ -0.26
SPTSSB-201ENST00000359175 HOXC10Q9NYD6 342 aa13.45□□□□□ -0.26
SPTSSB-201ENST00000359175 AQP12BA6NM10 295 aa13.44□□□□□ -0.26
SPTSSB-201ENST00000359175 TMCC2O75069 709 aa13.44□□□□□ -0.26
SPTSSB-201ENST00000359175 ENDOD1O94919 500 aa13.44□□□□□ -0.26
SPTSSB-201ENST00000359175 GSNP06396 782 aa13.44□□□□□ -0.26
SPTSSB-201ENST00000359175 SNAP25P60880 206 aa13.44□□□□□ -0.26
SPTSSB-201ENST00000359175 BST2Q10589 180 aaKnown RBP13.44□□□□□ -0.26
SPTSSB-201ENST00000359175 NPTX1Q15818 432 aa13.44□□□□□ -0.26
SPTSSB-201ENST00000359175 CTF1Q16619 201 aa13.44□□□□□ -0.26
SPTSSB-201ENST00000359175 GLRA4Q5JXX5 417 aa13.44□□□□□ -0.26
SPTSSB-201ENST00000359175 TDRD10Q5VZ19 366 aaKnown RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms