RNA–Protein interactions for RNA: ENST00000357811.7

COL13A1-202, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,991 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-202ENST00000357811 LAYNQ6UX15 382 aa20.71■□□□□ 0.91
COL13A1-202ENST00000357811 GK5Q6ZS86 529 aa20.71■□□□□ 0.91
COL13A1-202ENST00000357811 TBL1YQ9BQ87 522 aa20.71■□□□□ 0.91
COL13A1-202ENST00000357811 FSD1LQ9BXM9 530 aa20.71■□□□□ 0.91
COL13A1-202ENST00000357811 BRD8Q9H0E9 1235 aa20.71■□□□□ 0.91
COL13A1-202ENST00000357811 TRHDEQ9UKU6 1024 aa20.71■□□□□ 0.91
COL13A1-202ENST00000357811 A0A1B0GVG6 124 aa20.71■□□□□ 0.91
COL13A1-202ENST00000357811 TMEM114B3SHH9 223 aa20.71■□□□□ 0.91
COL13A1-202ENST00000357811 THP07101 528 aa20.71■□□□□ 0.91
COL13A1-202ENST00000357811 ARNTP27540 789 aa20.71■□□□□ 0.91
COL13A1-202ENST00000357811 SDHAF4Q5VUM1 108 aa20.71■□□□□ 0.91
COL13A1-202ENST00000357811 CNSTQ6PJW8 725 aa20.71■□□□□ 0.91
COL13A1-202ENST00000357811 BNC2Q6ZN30 1099 aaPredicted RBP20.71■□□□□ 0.91
COL13A1-202ENST00000357811 SATL1Q86VE3 508 aa20.71■□□□□ 0.91
COL13A1-202ENST00000357811 SLC9A7Q96T83 725 aa20.71■□□□□ 0.91
COL13A1-202ENST00000357811 ADA2Q9NZK5 511 aa20.71■□□□□ 0.91
COL13A1-202ENST00000357811 ST3GAL5Q9UNP4 418 aa20.71■□□□□ 0.91
COL13A1-202ENST00000357811 GNEQ9Y223 722 aaKnown RBP20.71■□□□□ 0.91
COL13A1-202ENST00000357811 NCAM2O15394 837 aa20.7■□□□□ 0.9
COL13A1-202ENST00000357811 KCNA5P22460 613 aa20.7■□□□□ 0.9
COL13A1-202ENST00000357811 AXLP30530 894 aa20.7■□□□□ 0.9
COL13A1-202ENST00000357811 CSE1LP55060 971 aaKnown RBP20.7■□□□□ 0.9
COL13A1-202ENST00000357811 ITKQ08881 620 aa20.7■□□□□ 0.9
COL13A1-202ENST00000357811 SLC12A1Q13621 1099 aa20.7■□□□□ 0.9
COL13A1-202ENST00000357811 PAOXQ6QHF9 649 aa20.7■□□□□ 0.9
COL13A1-202ENST00000357811 TXNDC5Q8NBS9 432 aaKnown RBP20.7■□□□□ 0.9
COL13A1-202ENST00000357811 WDR41Q9HAD4 459 aa20.7■□□□□ 0.9
COL13A1-202ENST00000357811 TNFRSF12AQ9NP84 129 aa20.7■□□□□ 0.9
COL13A1-202ENST00000357811 APPL1Q9UKG1 709 aa20.7■□□□□ 0.9
COL13A1-202ENST00000357811 ATP6AP2A0A1C7CYW4 349 aa20.7■□□□□ 0.9
COL13A1-202ENST00000357811 C17orf102A2RUQ5 167 aa20.7■□□□□ 0.9
COL13A1-202ENST00000357811 HHLA1C9JL84 531 aa20.7■□□□□ 0.9
COL13A1-202ENST00000357811 ATP6AP2O75787 350 aa20.7■□□□□ 0.9
COL13A1-202ENST00000357811 FBXO21O94952 628 aa20.7■□□□□ 0.9
COL13A1-202ENST00000357811 STMN1P16949 149 aa20.7■□□□□ 0.9
COL13A1-202ENST00000357811 CRYBB1P53674 252 aaPredicted RBP20.7■□□□□ 0.9
COL13A1-202ENST00000357811 TLR1Q15399 786 aa20.7■□□□□ 0.9
COL13A1-202ENST00000357811 CNPY1Q3B7I2 92 aa20.7■□□□□ 0.9
COL13A1-202ENST00000357811 TSTD2Q5T7W7 516 aa20.7■□□□□ 0.9
COL13A1-202ENST00000357811 TFAP2DQ7Z6R9 452 aa20.7■□□□□ 0.9
COL13A1-202ENST00000357811 SPATA24Q86W54 205 aa20.7■□□□□ 0.9
COL13A1-202ENST00000357811 ZNF354CQ86Y25 554 aa20.7■□□□□ 0.9
COL13A1-202ENST00000357811 HEXDCQ8WVB3 486 aa20.7■□□□□ 0.9
COL13A1-202ENST00000357811 JADE3Q92613 823 aa20.7■□□□□ 0.9
COL13A1-202ENST00000357811 CNBD2Q96M20 576 aa20.7■□□□□ 0.9
COL13A1-202ENST00000357811 SLC39A8Q9C0K1 460 aa20.7■□□□□ 0.9
COL13A1-202ENST00000357811 POMKQ9H5K3 350 aa20.7■□□□□ 0.9
COL13A1-202ENST00000357811 RBM22Q9NW64 420 aaKnown RBP eCLIP20.7■□□□□ 0.9
COL13A1-202ENST00000357811 OR4Q2P0C623 313 aa20.7■□□□□ 0.9
COL13A1-202ENST00000357811 PPARGP37231 505 aaPredicted RBP20.7■□□□□ 0.9
COL13A1-202ENST00000357811 CXCR3P49682 368 aa20.7■□□□□ 0.9
COL13A1-202ENST00000357811 SCAPQ12770 1279 aa20.7■□□□□ 0.9
COL13A1-202ENST00000357811 PPP1R3AQ16821 1122 aa20.7■□□□□ 0.9
COL13A1-202ENST00000357811 PKN3Q6P5Z2 889 aa20.7■□□□□ 0.9
COL13A1-202ENST00000357811 PQLC1Q8N2U9 271 aa20.7■□□□□ 0.9
COL13A1-202ENST00000357811 EXT2Q93063 718 aa20.7■□□□□ 0.9
COL13A1-202ENST00000357811 FAM105AQ9NUU6 356 aa20.7■□□□□ 0.9
COL13A1-202ENST00000357811 COPG1Q9Y678 874 aaKnown RBP20.7■□□□□ 0.9
COL13A1-202ENST00000357811 ARL5CA6NH57 179 aa20.69■□□□□ 0.9
COL13A1-202ENST00000357811 KCNU1A8MYU2 1149 aa20.69■□□□□ 0.9
COL13A1-202ENST00000357811 ATP6V1B1P15313 513 aa20.69■□□□□ 0.9
COL13A1-202ENST00000357811 LRPAP1P30533 357 aa20.69■□□□□ 0.9
COL13A1-202ENST00000357811 ADAM17P78536 824 aa20.69■□□□□ 0.9
COL13A1-202ENST00000357811 CDC42EP1Q00587 391 aa20.69■□□□□ 0.9
COL13A1-202ENST00000357811 LIN52Q52LA3 116 aa20.69■□□□□ 0.9
COL13A1-202ENST00000357811 ZNF467Q7Z7K2 595 aaPredicted RBP20.69■□□□□ 0.9
COL13A1-202ENST00000357811 LRRTM3Q86VH5 581 aa20.69■□□□□ 0.9
COL13A1-202ENST00000357811 ST13P4Q8IZP2 240 aaPredicted RBP20.69■□□□□ 0.9
COL13A1-202ENST00000357811 DCUN1D1Q96GG9 259 aa20.69■□□□□ 0.9
COL13A1-202ENST00000357811 SMARCD1Q96GM5 515 aa20.69■□□□□ 0.9
COL13A1-202ENST00000357811 SEMA6AQ9H2E6 1030 aa20.69■□□□□ 0.9
COL13A1-202ENST00000357811 MAGEB16A2A368 324 aa20.69■□□□□ 0.9
COL13A1-202ENST00000357811 MYADML2A6NDP7 307 aa20.69■□□□□ 0.9
COL13A1-202ENST00000357811 RAB10P61026 200 aa20.69■□□□□ 0.9
COL13A1-202ENST00000357811 GALNT15Q8N3T1 639 aa20.69■□□□□ 0.9
COL13A1-202ENST00000357811 STYXQ8WUJ0 223 aa20.69■□□□□ 0.9
COL13A1-202ENST00000357811 LRGUKQ96M69 825 aa20.69■□□□□ 0.9
COL13A1-202ENST00000357811 PCDHAC1Q9H158 963 aa20.69■□□□□ 0.9
COL13A1-202ENST00000357811 CLIC5Q9NZA1 410 aa20.69■□□□□ 0.9
COL13A1-202ENST00000357811 STK39Q9UEW8 545 aa20.69■□□□□ 0.9
COL13A1-202ENST00000357811 ERI2A8K979 691 aaKnown RBP20.68■□□□□ 0.9
COL13A1-202ENST00000357811 PAGE1O75459 146 aa20.68■□□□□ 0.9
COL13A1-202ENST00000357811 CABYRO75952 493 aa20.68■□□□□ 0.9
COL13A1-202ENST00000357811 HLA-DQB2P05538 268 aa20.68■□□□□ 0.9
COL13A1-202ENST00000357811 SLC12A2P55011 1212 aa20.68■□□□□ 0.9
COL13A1-202ENST00000357811 PRKAA1Q13131 559 aa20.68■□□□□ 0.9
COL13A1-202ENST00000357811 IYDQ6PHW0 289 aa20.68■□□□□ 0.9
COL13A1-202ENST00000357811 KIFC1Q9BW19 673 aa20.68■□□□□ 0.9
COL13A1-202ENST00000357811 PMLP29590 882 aa20.68■□□□□ 0.9
COL13A1-202ENST00000357811 LHX1P48742 406 aa20.68■□□□□ 0.9
COL13A1-202ENST00000357811 RALGDSQ12967 914 aa20.68■□□□□ 0.9
COL13A1-202ENST00000357811 CWF19L1Q69YN2 538 aaKnown RBP20.68■□□□□ 0.9
COL13A1-202ENST00000357811 LILRA2Q8N149 483 aa20.68■□□□□ 0.9
COL13A1-202ENST00000357811 PIP4K2CQ8TBX8 421 aa20.68■□□□□ 0.9
COL13A1-202ENST00000357811 NMD3Q96D46 503 aaKnown RBP20.68■□□□□ 0.9
COL13A1-202ENST00000357811 KLHL5Q96PQ7 755 aa20.68■□□□□ 0.9
COL13A1-202ENST00000357811 RTP3Q9BQQ7 232 aa20.68■□□□□ 0.9
COL13A1-202ENST00000357811 MCMBPQ9BTE3 642 aa20.68■□□□□ 0.9
COL13A1-202ENST00000357811 MTSS1O43312 755 aa20.67■□□□□ 0.9
COL13A1-202ENST00000357811 CSPG5O95196 566 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms