RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 SNX13Q9Y5W8 968 aa8.35□□□□□ -1.07
CDC42SE1-201ENST00000357235 CASQ2O14958 399 aaPredicted RBP8.35□□□□□ -1.07
CDC42SE1-201ENST00000357235 FOXD2O60548 495 aaPredicted RBP8.35□□□□□ -1.07
CDC42SE1-201ENST00000357235 ARSAP15289 507 aa8.35□□□□□ -1.07
CDC42SE1-201ENST00000357235 DPEP1P16444 411 aa8.35□□□□□ -1.07
CDC42SE1-201ENST00000357235 ZNF23P17027 643 aa8.35□□□□□ -1.07
CDC42SE1-201ENST00000357235 PSMC3P17980 439 aa8.35□□□□□ -1.07
CDC42SE1-201ENST00000357235 PTPN1P18031 435 aaKnown RBP8.35□□□□□ -1.07
CDC42SE1-201ENST00000357235 TFEBP19484 476 aa8.35□□□□□ -1.07
CDC42SE1-201ENST00000357235 NR2C2P49116 596 aa8.35□□□□□ -1.07
CDC42SE1-201ENST00000357235 HARS2P49590 506 aaKnown RBP8.35□□□□□ -1.07
CDC42SE1-201ENST00000357235 SULT1E1P49888 294 aa8.35□□□□□ -1.07
CDC42SE1-201ENST00000357235 RABGGTBP53611 331 aa8.35□□□□□ -1.07
CDC42SE1-201ENST00000357235 RALGDSQ12967 914 aa8.35□□□□□ -1.07
CDC42SE1-201ENST00000357235 PTK2BQ14289 1009 aa8.35□□□□□ -1.07
CDC42SE1-201ENST00000357235 USP10Q14694 798 aaKnown RBP8.35□□□□□ -1.07
CDC42SE1-201ENST00000357235 NANOGP8Q6NSW7 305 aa8.35□□□□□ -1.07
CDC42SE1-201ENST00000357235 DLK2Q6UY11 383 aa8.35□□□□□ -1.07
CDC42SE1-201ENST00000357235 CATSPERGQ6ZRH7 1159 aa8.35□□□□□ -1.07
CDC42SE1-201ENST00000357235 ZNF567Q8N184 647 aa8.35□□□□□ -1.07
CDC42SE1-201ENST00000357235 TSPAN14Q8NG11 270 aa8.35□□□□□ -1.07
CDC42SE1-201ENST00000357235 KHSRPQ92945 711 aaKnown RBP eCLIP8.35□□□□□ -1.07
CDC42SE1-201ENST00000357235 TMIGD2Q96BF3 282 aa8.35□□□□□ -1.07
CDC42SE1-201ENST00000357235 CPNE1Q99829 537 aa8.35□□□□□ -1.07
CDC42SE1-201ENST00000357235 ACE2Q9BYF1 805 aaPredicted RBP8.35□□□□□ -1.07
CDC42SE1-201ENST00000357235 GTSE1Q9NYZ3 720 aa8.35□□□□□ -1.07
CDC42SE1-201ENST00000357235 VANGL2Q9ULK5 521 aa8.35□□□□□ -1.07
CDC42SE1-201ENST00000357235 TNFSF13BQ9Y275 285 aa8.35□□□□□ -1.07
CDC42SE1-201ENST00000357235 IGKV6D-21A0A0A0MT36 114 aa8.35□□□□□ -1.07
CDC42SE1-201ENST00000357235 SOWAHBA6NEL2 793 aa8.35□□□□□ -1.07
CDC42SE1-201ENST00000357235 TTC34A8MYJ7 566 aa8.35□□□□□ -1.07
CDC42SE1-201ENST00000357235 HDAC3O15379 428 aa8.35□□□□□ -1.07
CDC42SE1-201ENST00000357235 GABBR2O75899 941 aa8.35□□□□□ -1.07
CDC42SE1-201ENST00000357235 SEC24DO94855 1032 aaPredicted RBP8.35□□□□□ -1.07
CDC42SE1-201ENST00000357235 ARF4P18085 180 aaPredicted RBP8.35□□□□□ -1.07
CDC42SE1-201ENST00000357235 ME2P23368 584 aa8.35□□□□□ -1.07
CDC42SE1-201ENST00000357235 RPL10P27635 214 aaKnown RBP8.35□□□□□ -1.07
CDC42SE1-201ENST00000357235 MAGEA6P43360 314 aa8.35□□□□□ -1.07
CDC42SE1-201ENST00000357235 OAZ1P54368 228 aa8.35□□□□□ -1.07
CDC42SE1-201ENST00000357235 ADGRE1Q14246 886 aa8.35□□□□□ -1.07
CDC42SE1-201ENST00000357235 SF3B4Q15427 424 aaKnown RBP eCLIP8.35□□□□□ -1.074e-7■■■□□ 16.7
CDC42SE1-201ENST00000357235 DPYSL2Q16555 572 aa8.35□□□□□ -1.07
CDC42SE1-201ENST00000357235 USP41Q3LFD5 358 aa8.35□□□□□ -1.07
CDC42SE1-201ENST00000357235 WDR45BQ5MNZ6 344 aa8.35□□□□□ -1.07
CDC42SE1-201ENST00000357235 MYO1HQ8N1T3 1032 aa8.35□□□□□ -1.07
CDC42SE1-201ENST00000357235 LSM14AQ8ND56 463 aaKnown RBP8.35□□□□□ -1.07
CDC42SE1-201ENST00000357235 GRIN3AQ8TCU5 1115 aa8.35□□□□□ -1.07
CDC42SE1-201ENST00000357235 OTUD5Q96G74 571 aa8.35□□□□□ -1.07
CDC42SE1-201ENST00000357235 APBA2Q99767 749 aa8.35□□□□□ -1.07
CDC42SE1-201ENST00000357235 SIAEQ9HAT2 523 aa8.35□□□□□ -1.07
CDC42SE1-201ENST00000357235 MTMR10Q9NXD2 777 aa8.35□□□□□ -1.07
CDC42SE1-201ENST00000357235 ZDHHC2Q9UIJ5 367 aa8.35□□□□□ -1.07
CDC42SE1-201ENST00000357235 SATB2Q9UPW6 733 aa8.35□□□□□ -1.07
CDC42SE1-201ENST00000357235 ZBTB42B2RXF5 422 aa8.34□□□□□ -1.07
CDC42SE1-201ENST00000357235 G3V2L1 256 aa8.34□□□□□ -1.07
CDC42SE1-201ENST00000357235 ALDH1A2O94788 518 aa8.34□□□□□ -1.07
CDC42SE1-201ENST00000357235 CHEK2O96017 543 aa8.34□□□□□ -1.07
CDC42SE1-201ENST00000357235 HDCP19113 662 aa8.34□□□□□ -1.07
CDC42SE1-201ENST00000357235 PROZP22891 400 aa8.34□□□□□ -1.07
CDC42SE1-201ENST00000357235 ICAM3P32942 547 aa8.34□□□□□ -1.07
CDC42SE1-201ENST00000357235 RPL14P50914 215 aaKnown RBP8.34□□□□□ -1.07
CDC42SE1-201ENST00000357235 TUBA1BP68363 451 aa8.34□□□□□ -1.07
CDC42SE1-201ENST00000357235 CYP2A13Q16696 494 aa8.34□□□□□ -1.07
CDC42SE1-201ENST00000357235 DGKDQ16760 1214 aa8.34□□□□□ -1.07
CDC42SE1-201ENST00000357235 TRIM16LQ309B1 348 aa8.34□□□□□ -1.07
CDC42SE1-201ENST00000357235 TREML2Q5T2D2 321 aa8.34□□□□□ -1.07
CDC42SE1-201ENST00000357235 GRTP1Q5TC63 336 aa8.34□□□□□ -1.07
CDC42SE1-201ENST00000357235 FAM219BQ5XKK7 198 aa8.34□□□□□ -1.07
CDC42SE1-201ENST00000357235 DCLRE1AQ6PJP8 1040 aa8.34□□□□□ -1.07
CDC42SE1-201ENST00000357235 C4orf22Q6V702 233 aa8.34□□□□□ -1.07
CDC42SE1-201ENST00000357235 TUBA1AQ71U36 451 aa8.34□□□□□ -1.07
CDC42SE1-201ENST00000357235 ZBTB46Q86UZ6 589 aa8.34□□□□□ -1.07
CDC42SE1-201ENST00000357235 DEFB106AQ8N104 65 aa8.34□□□□□ -1.07
CDC42SE1-201ENST00000357235 PDZD8Q8NEN9 1154 aa8.34□□□□□ -1.07
CDC42SE1-201ENST00000357235 DNERQ8NFT8 737 aa8.34□□□□□ -1.07
CDC42SE1-201ENST00000357235 CALML6Q8TD86 181 aa8.34□□□□□ -1.07
CDC42SE1-201ENST00000357235 KCTD4Q8WVF5 259 aa8.34□□□□□ -1.07
CDC42SE1-201ENST00000357235 VPS39Q96JC1 886 aa8.34□□□□□ -1.07
CDC42SE1-201ENST00000357235 KLHL32Q96NJ5 620 aa8.34□□□□□ -1.07
CDC42SE1-201ENST00000357235 GPR20Q99678 358 aa8.34□□□□□ -1.07
CDC42SE1-201ENST00000357235 RBBP8Q99708 897 aa8.34□□□□□ -1.07
CDC42SE1-201ENST00000357235 CIB1Q99828 191 aa8.34□□□□□ -1.07
CDC42SE1-201ENST00000357235 SLC39A3Q9BRY0 314 aa8.34□□□□□ -1.07
CDC42SE1-201ENST00000357235 CYP4F12Q9HCS2 524 aa8.34□□□□□ -1.07
CDC42SE1-201ENST00000357235 PALMDQ9NP74 551 aa8.34□□□□□ -1.07
CDC42SE1-201ENST00000357235 CNGB3Q9NQW8 809 aa8.34□□□□□ -1.07
CDC42SE1-201ENST00000357235 CCDC167Q9P0B6 97 aa8.34□□□□□ -1.07
CDC42SE1-201ENST00000357235 EPS15L1Q9UBC2 864 aa8.34□□□□□ -1.07
CDC42SE1-201ENST00000357235 KLHL3Q9UH77 587 aa8.34□□□□□ -1.07
CDC42SE1-201ENST00000357235 ERVK-11Q9UQG0 969 aa8.34□□□□□ -1.07
CDC42SE1-201ENST00000357235 RUVBL2Q9Y230 463 aaKnown RBP8.34□□□□□ -1.07
CDC42SE1-201ENST00000357235 CDYLQ9Y232 598 aa8.34□□□□□ -1.07
CDC42SE1-201ENST00000357235 SQORQ9Y6N5 450 aa8.34□□□□□ -1.07
CDC42SE1-201ENST00000357235 ARHGEF37A1IGU5 675 aa8.34□□□□□ -1.07
CDC42SE1-201ENST00000357235 M0QYT0 321 aa8.34□□□□□ -1.07
CDC42SE1-201ENST00000357235 TEX28O15482 410 aa8.34□□□□□ -1.07
CDC42SE1-201ENST00000357235 TPST1O60507 370 aa8.34□□□□□ -1.07
CDC42SE1-201ENST00000357235 RNASEH2AO75792 299 aaKnown RBP8.34□□□□□ -1.07
CDC42SE1-201ENST00000357235 ENO2P09104 434 aaPredicted RBP8.34□□□□□ -1.07
CDC42SE1-201ENST00000357235 HNRNPLP14866 589 aaKnown RBP eCLIP8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms