RNA–Protein interactions for RNA: ENST00000354537.1

CAPN9-202, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-202ENST00000354537 CACNG3O60359 315 aa11.55□□□□□ -0.56
CAPN9-202ENST00000354537 FAM163BP0C2L3 166 aa11.55□□□□□ -0.56
CAPN9-202ENST00000354537 INSRRP14616 1297 aa11.55□□□□□ -0.56
CAPN9-202ENST00000354537 CD68P34810 354 aaPredicted RBP11.55□□□□□ -0.56
CAPN9-202ENST00000354537 CYTH1Q15438 398 aa11.55□□□□□ -0.56
CAPN9-202ENST00000354537 INTS11Q5TA45 600 aaKnown RBP11.55□□□□□ -0.56
CAPN9-202ENST00000354537 KLHL35Q6PF15 583 aa11.55□□□□□ -0.56
CAPN9-202ENST00000354537 HERC6Q8IVU3 1022 aa11.55□□□□□ -0.56
CAPN9-202ENST00000354537 ACVR1CQ8NER5 493 aa11.55□□□□□ -0.56
CAPN9-202ENST00000354537 SPPL2BQ8TCT7 592 aa11.55□□□□□ -0.56
CAPN9-202ENST00000354537 PTCD2Q8WV60 388 aaKnown RBP11.55□□□□□ -0.56
CAPN9-202ENST00000354537 KCTD4Q8WVF5 259 aa11.55□□□□□ -0.56
CAPN9-202ENST00000354537 LRTOMTQ8WZ04 291 aa11.55□□□□□ -0.56
CAPN9-202ENST00000354537 LPGAT1Q92604 370 aa11.55□□□□□ -0.56
CAPN9-202ENST00000354537 TFAP2CQ92754 450 aa11.55□□□□□ -0.56
CAPN9-202ENST00000354537 SLCO4A1Q96BD0 722 aa11.55□□□□□ -0.56
CAPN9-202ENST00000354537 SNX27Q96L92 541 aa11.55□□□□□ -0.56
CAPN9-202ENST00000354537 RANBP9Q96S59 729 aa11.55□□□□□ -0.56
CAPN9-202ENST00000354537 CEP41Q9BYV8 373 aa11.55□□□□□ -0.56
CAPN9-202ENST00000354537 TRPV6Q9H1D0 765 aa11.55□□□□□ -0.56
CAPN9-202ENST00000354537 CHRAC1Q9NRG0 131 aa11.55□□□□□ -0.56
CAPN9-202ENST00000354537 KCNK1O00180 336 aa11.55□□□□□ -0.56
CAPN9-202ENST00000354537 PTPN1P18031 435 aaKnown RBP11.55□□□□□ -0.56
CAPN9-202ENST00000354537 ERCC2P18074 760 aa11.55□□□□□ -0.56
CAPN9-202ENST00000354537 ADORA2BP29275 332 aa11.55□□□□□ -0.56
CAPN9-202ENST00000354537 ADRA1BP35368 520 aa11.55□□□□□ -0.56
CAPN9-202ENST00000354537 GNL1P36915 607 aaPredicted RBP11.55□□□□□ -0.56
CAPN9-202ENST00000354537 GJA9P57773 515 aa11.55□□□□□ -0.56
CAPN9-202ENST00000354537 GALNT2Q10471 571 aa11.55□□□□□ -0.56
CAPN9-202ENST00000354537 SPIDRQ14159 915 aa11.55□□□□□ -0.56
CAPN9-202ENST00000354537 PCID2Q5JVF3 399 aa11.55□□□□□ -0.56
CAPN9-202ENST00000354537 REP15Q6BDI9 236 aa11.55□□□□□ -0.56
CAPN9-202ENST00000354537 MICALL2Q8IY33 904 aa11.55□□□□□ -0.56
CAPN9-202ENST00000354537 RNF148Q8N7C7 305 aa11.55□□□□□ -0.56
CAPN9-202ENST00000354537 ZNF420Q8TAQ5 688 aaPredicted RBP11.55□□□□□ -0.56
CAPN9-202ENST00000354537 ROPN1LQ96C74 230 aa11.55□□□□□ -0.56
CAPN9-202ENST00000354537 TEKT5Q96M29 485 aa11.55□□□□□ -0.56
CAPN9-202ENST00000354537 TSGA13Q96PP4 275 aa11.55□□□□□ -0.56
CAPN9-202ENST00000354537 TCF12Q99081 682 aa11.55□□□□□ -0.56
CAPN9-202ENST00000354537 RHOBTB2Q9BYZ6 727 aa11.55□□□□□ -0.56
CAPN9-202ENST00000354537 DPEP3Q9H4B8 488 aa11.55□□□□□ -0.56
CAPN9-202ENST00000354537 CAAP1Q9H8G2 361 aa11.55□□□□□ -0.56
CAPN9-202ENST00000354537 XPR1Q9UBH6 696 aa11.55□□□□□ -0.56
CAPN9-202ENST00000354537 EP400Q96L91 3159 aa11.55□□□□□ -0.56
CAPN9-202ENST00000354537 MYOCOSA0A1B0GUC4 107 aa11.54□□□□□ -0.56
CAPN9-202ENST00000354537 KCNU1A8MYU2 1149 aa11.54□□□□□ -0.56
CAPN9-202ENST00000354537 PSMD12O00232 456 aaPredicted RBP11.54□□□□□ -0.56
CAPN9-202ENST00000354537 USP12O75317 370 aa11.54□□□□□ -0.56
CAPN9-202ENST00000354537 JUNP05412 331 aaKnown RBP11.54□□□□□ -0.56
CAPN9-202ENST00000354537 SNRPB2P08579 225 aaKnown RBP11.54□□□□□ -0.56
CAPN9-202ENST00000354537 DPEP1P16444 411 aa11.54□□□□□ -0.56
CAPN9-202ENST00000354537 STMN1P16949 149 aa11.54□□□□□ -0.56
CAPN9-202ENST00000354537 MYF6P23409 242 aa11.54□□□□□ -0.56
CAPN9-202ENST00000354537 NMBRP28336 390 aa11.54□□□□□ -0.56
CAPN9-202ENST00000354537 PNPLA4P41247 253 aa11.54□□□□□ -0.56
CAPN9-202ENST00000354537 GALK1P51570 392 aa11.54□□□□□ -0.56
CAPN9-202ENST00000354537 NRF1Q16656 503 aa11.54□□□□□ -0.56
CAPN9-202ENST00000354537 DCAF6Q58WW2 860 aa11.54□□□□□ -0.56
CAPN9-202ENST00000354537 TSTD2Q5T7W7 516 aa11.54□□□□□ -0.56
CAPN9-202ENST00000354537 C9orf57Q5W0N0 161 aa11.54□□□□□ -0.56
CAPN9-202ENST00000354537 PKN3Q6P5Z2 889 aa11.54□□□□□ -0.56
CAPN9-202ENST00000354537 ZBTB49Q6ZSB9 765 aa11.54□□□□□ -0.56
CAPN9-202ENST00000354537 EEPD1Q7L9B9 569 aa11.54□□□□□ -0.56
CAPN9-202ENST00000354537 ERMP1Q7Z2K6 904 aa11.54□□□□□ -0.56
CAPN9-202ENST00000354537 GPR141Q7Z602 305 aa11.54□□□□□ -0.56
CAPN9-202ENST00000354537 FIBCD1Q8N539 461 aa11.54□□□□□ -0.56
CAPN9-202ENST00000354537 TNIP3Q96KP6 325 aa11.54□□□□□ -0.56
CAPN9-202ENST00000354537 PPP1R2P1Q96PQ5 205 aa11.54□□□□□ -0.56
CAPN9-202ENST00000354537 HNRNPABQ99729 332 aaKnown RBP11.54□□□□□ -0.56
CAPN9-202ENST00000354537 TRIM15Q9C019 465 aa11.54□□□□□ -0.56
CAPN9-202ENST00000354537 UPF3AQ9H1J1 476 aaKnown RBP11.54□□□□□ -0.56
CAPN9-202ENST00000354537 CROTQ9UKG9 612 aa11.54□□□□□ -0.56
CAPN9-202ENST00000354537 FAF1Q9UNN5 650 aaPredicted RBP11.54□□□□□ -0.56
CAPN9-202ENST00000354537 AKT3Q9Y243 479 aa11.54□□□□□ -0.56
CAPN9-202ENST00000354537 HES2Q9Y543 173 aa11.54□□□□□ -0.56
CAPN9-202ENST00000354537 RALGAPA2Q2PPJ7 1873 aa11.54□□□□□ -0.56
CAPN9-202ENST00000354537 WDR90Q96KV7 1748 aa11.54□□□□□ -0.56
CAPN9-202ENST00000354537 AQP12BA6NM10 295 aa11.54□□□□□ -0.56
CAPN9-202ENST00000354537 BBIP1A8MTZ0 92 aa11.54□□□□□ -0.56
CAPN9-202ENST00000354537 M0QYT0 321 aa11.54□□□□□ -0.56
CAPN9-202ENST00000354537 PIRO00625 290 aa11.54□□□□□ -0.56
CAPN9-202ENST00000354537 UBDO15205 165 aa11.54□□□□□ -0.56
CAPN9-202ENST00000354537 CBFA2T3O75081 653 aa11.54□□□□□ -0.56
CAPN9-202ENST00000354537 CD4P01730 458 aa11.54□□□□□ -0.56
CAPN9-202ENST00000354537 AHSGP02765 367 aa11.54□□□□□ -0.56
CAPN9-202ENST00000354537 MYL3P08590 195 aa11.54□□□□□ -0.56
CAPN9-202ENST00000354537 CCR10P46092 362 aa11.54□□□□□ -0.56
CAPN9-202ENST00000354537 GTF2A2P52657 109 aa11.54□□□□□ -0.56
CAPN9-202ENST00000354537 NME5P56597 212 aa11.54□□□□□ -0.56
CAPN9-202ENST00000354537 FASTKQ14296 549 aaKnown RBP11.54□□□□□ -0.56
CAPN9-202ENST00000354537 TTLL4Q14679 1199 aa11.54□□□□□ -0.56
CAPN9-202ENST00000354537 TREML2Q5T2D2 321 aa11.54□□□□□ -0.56
CAPN9-202ENST00000354537 PRMT9Q6P2P2 845 aa11.54□□□□□ -0.56
CAPN9-202ENST00000354537 PAOXQ6QHF9 649 aa11.54□□□□□ -0.56
CAPN9-202ENST00000354537 GK5Q6ZS86 529 aa11.54□□□□□ -0.56
CAPN9-202ENST00000354537 ERO1BQ86YB8 467 aa11.54□□□□□ -0.56
CAPN9-202ENST00000354537 CAMK1DQ8IU85 385 aa11.54□□□□□ -0.56
CAPN9-202ENST00000354537 AQP12AQ8IXF9 295 aa11.54□□□□□ -0.56
CAPN9-202ENST00000354537 SMYD1Q8NB12 490 aa11.54□□□□□ -0.56
CAPN9-202ENST00000354537 ADAM32Q8TC27 787 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms