RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 FAXCQ5TGI0 409 aa16.18■□□□□ 0.18
DDX55-202ENST00000354291 USP7Q93009 1102 aa16.18■□□□□ 0.18
DDX55-202ENST00000354291 SLC35C1Q96A29 364 aa16.18■□□□□ 0.18
DDX55-202ENST00000354291 CCDC74AQ96AQ1 378 aa16.18■□□□□ 0.18
DDX55-202ENST00000354291 HSFY1Q96LI6 401 aa16.18■□□□□ 0.18
DDX55-202ENST00000354291 TMEM74Q96NL1 305 aa16.18■□□□□ 0.18
DDX55-202ENST00000354291 RPRD1AQ96P16 312 aaPredicted RBP16.18■□□□□ 0.18
DDX55-202ENST00000354291 CPEB1Q9BZB8 566 aaKnown RBP16.18■□□□□ 0.18
DDX55-202ENST00000354291 SLC13A1Q9BZW2 595 aa16.18■□□□□ 0.18
DDX55-202ENST00000354291 FOXJ2Q9P0K8 574 aa16.18■□□□□ 0.18
DDX55-202ENST00000354291 PLAAQ9Y263 795 aa16.18■□□□□ 0.18
DDX55-202ENST00000354291 IGLON5A6NGN9 336 aa16.17■□□□□ 0.18
DDX55-202ENST00000354291 D6RAR5 112 aa16.17■□□□□ 0.18
DDX55-202ENST00000354291 PMM2O15305 246 aa16.17■□□□□ 0.18
DDX55-202ENST00000354291 ENDOD1O94919 500 aa16.17■□□□□ 0.18
DDX55-202ENST00000354291 TSHRP16473 764 aa16.17■□□□□ 0.18
DDX55-202ENST00000354291 RRM1P23921 792 aa16.17■□□□□ 0.18
DDX55-202ENST00000354291 ETV5P41161 510 aa16.17■□□□□ 0.18
DDX55-202ENST00000354291 THOP1P52888 689 aa16.17■□□□□ 0.18
DDX55-202ENST00000354291 POLE2P56282 527 aa16.17■□□□□ 0.18
DDX55-202ENST00000354291 C1QBPQ07021 282 aaKnown RBP16.17■□□□□ 0.18
DDX55-202ENST00000354291 CETN1Q12798 172 aa16.17■□□□□ 0.18
DDX55-202ENST00000354291 LRMPQ12912 555 aa16.17■□□□□ 0.18
DDX55-202ENST00000354291 TCEA2Q15560 299 aa16.17■□□□□ 0.18
DDX55-202ENST00000354291 TTC39BQ5VTQ0 682 aaPredicted RBP16.17■□□□□ 0.18
DDX55-202ENST00000354291 ISM2Q6H9L7 571 aa16.17■□□□□ 0.18
DDX55-202ENST00000354291 KIAA1161Q6NSJ0 714 aa16.17■□□□□ 0.18
DDX55-202ENST00000354291 FBXL22Q6P050 247 aa16.17■□□□□ 0.18
DDX55-202ENST00000354291 PHACTR4Q8IZ21 702 aa16.17■□□□□ 0.18
DDX55-202ENST00000354291 PRMT1Q99873 361 aaKnown RBP16.17■□□□□ 0.18
DDX55-202ENST00000354291 LRRC61Q9BV99 259 aa16.17■□□□□ 0.18
DDX55-202ENST00000354291 CLPBQ9H078 707 aa16.17■□□□□ 0.18
DDX55-202ENST00000354291 MUC3BQ9H195 1237 aa16.17■□□□□ 0.18
DDX55-202ENST00000354291 TNKS2Q9H2K2 1166 aa16.17■□□□□ 0.18
DDX55-202ENST00000354291 ZNF71Q9NQZ8 489 aaPredicted RBP16.17■□□□□ 0.18
DDX55-202ENST00000354291 ST7Q9NRC1 585 aa16.17■□□□□ 0.18
DDX55-202ENST00000354291 IL36AQ9UHA7 158 aa16.17■□□□□ 0.18
DDX55-202ENST00000354291 MAN1B1Q9UKM7 699 aa16.17■□□□□ 0.18
DDX55-202ENST00000354291 SYNJ2BP-COX16A0A087WUM0 186 aa16.16■□□□□ 0.18
DDX55-202ENST00000354291 A0A1W2PQM1 296 aa16.16■□□□□ 0.18
DDX55-202ENST00000354291 BICDL2A1A5D9 508 aa16.16■□□□□ 0.18
DDX55-202ENST00000354291 SMAD6O43541 496 aaKnown RBP16.16■□□□□ 0.18
DDX55-202ENST00000354291 SNAP91O60641 907 aa16.16■□□□□ 0.18
DDX55-202ENST00000354291 LEFTY1O75610 366 aa16.16■□□□□ 0.18
DDX55-202ENST00000354291 TRUB2O95900 331 aaKnown RBP16.16■□□□□ 0.18
DDX55-202ENST00000354291 CALCAP01258 141 aa16.16■□□□□ 0.18
DDX55-202ENST00000354291 FMO5P49326 533 aa16.16■□□□□ 0.18
DDX55-202ENST00000354291 NEK3P51956 506 aa16.16■□□□□ 0.18
DDX55-202ENST00000354291 PTK2BQ14289 1009 aa16.16■□□□□ 0.18
DDX55-202ENST00000354291 CNGA2Q16280 664 aa16.16■□□□□ 0.18
DDX55-202ENST00000354291 CCDC40Q4G0X9 1142 aa16.16■□□□□ 0.18
DDX55-202ENST00000354291 FOXR2Q6PJQ5 311 aa16.16■□□□□ 0.18
DDX55-202ENST00000354291 TMEM270Q6UE05 265 aa16.16■□□□□ 0.18
DDX55-202ENST00000354291 Q8N9G6 341 aaPredicted RBP16.16■□□□□ 0.18
DDX55-202ENST00000354291 SCG3Q8WXD2 468 aaKnown RBP16.16■□□□□ 0.18
DDX55-202ENST00000354291 PPP1R16AQ96I34 528 aa16.16■□□□□ 0.18
DDX55-202ENST00000354291 KLF6Q99612 283 aaPredicted RBP16.16■□□□□ 0.18
DDX55-202ENST00000354291 SRRTQ9BXP5 876 aaKnown RBP16.16■□□□□ 0.18
DDX55-202ENST00000354291 LRRN3Q9H3W5 708 aa16.16■□□□□ 0.18
DDX55-202ENST00000354291 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.16■□□□□ 0.18
DDX55-202ENST00000354291 COX16Q9P0S2 106 aa16.16■□□□□ 0.18
DDX55-202ENST00000354291 ANAPC2Q9UJX6 822 aa16.16■□□□□ 0.18
DDX55-202ENST00000354291 OR51B4Q9Y5P0 310 aa16.16■□□□□ 0.18
DDX55-202ENST00000354291 FADS3Q9Y5Q0 445 aa16.16■□□□□ 0.18
DDX55-202ENST00000354291 UNC13CQ8NB66 2214 aa16.15■□□□□ 0.18
DDX55-202ENST00000354291 ABCA12Q86UK0 2595 aa16.15■□□□□ 0.18
DDX55-202ENST00000354291 ANKRD17O75179 2603 aaKnown RBP16.15■□□□□ 0.18
DDX55-202ENST00000354291 CELA2BP08218 269 aaPredicted RBP16.15■□□□□ 0.18
DDX55-202ENST00000354291 ADRB3P13945 408 aa16.15■□□□□ 0.18
DDX55-202ENST00000354291 CD44P16070 742 aaKnown RBP16.15■□□□□ 0.18
DDX55-202ENST00000354291 BRD2P25440 801 aaKnown RBP16.15■□□□□ 0.18
DDX55-202ENST00000354291 CCKBRP32239 447 aa16.15■□□□□ 0.18
DDX55-202ENST00000354291 RECQLP46063 649 aaPredicted RBP16.15■□□□□ 0.18
DDX55-202ENST00000354291 IRAK1P51617 712 aa16.15■□□□□ 0.18
DDX55-202ENST00000354291 PFN3P60673 137 aa16.15■□□□□ 0.18
DDX55-202ENST00000354291 KRT83P78385 493 aa16.15■□□□□ 0.18
DDX55-202ENST00000354291 KLHL10Q6JEL2 608 aa16.15■□□□□ 0.18
DDX55-202ENST00000354291 LINGO4Q6UY18 593 aa16.15■□□□□ 0.18
DDX55-202ENST00000354291 DTX1Q86Y01 620 aa16.15■□□□□ 0.18
DDX55-202ENST00000354291 ARL10Q8N8L6 244 aa16.15■□□□□ 0.18
DDX55-202ENST00000354291 KYQ8NBH2 561 aa16.15■□□□□ 0.18
DDX55-202ENST00000354291 LENG8Q96PV6 779 aaPredicted RBP16.15■□□□□ 0.18
DDX55-202ENST00000354291 ZSWIM1Q9BR11 485 aa16.15■□□□□ 0.18
DDX55-202ENST00000354291 SLC12A9Q9BXP2 914 aa16.15■□□□□ 0.18
DDX55-202ENST00000354291 PLEKHB1Q9UF11 243 aaPredicted RBP16.15■□□□□ 0.18
DDX55-202ENST00000354291 VANGL2Q9ULK5 521 aa16.15■□□□□ 0.18
DDX55-202ENST00000354291 PNMA8BQ9ULN7 279 aaPredicted RBP16.15■□□□□ 0.18
DDX55-202ENST00000354291 HS3ST2Q9Y278 367 aa16.15■□□□□ 0.18
DDX55-202ENST00000354291 PCDHB4Q9Y5E5 795 aa16.15■□□□□ 0.18
DDX55-202ENST00000354291 RP1L1Q8IWN7 2480 aaPredicted RBP16.14■□□□□ 0.18
DDX55-202ENST00000354291 A0A1W2PQC6 194 aa16.14■□□□□ 0.17
DDX55-202ENST00000354291 PPP1R3GB7ZBB8 358 aa16.14■□□□□ 0.17
DDX55-202ENST00000354291 C9orf172C9J069 976 aa16.14■□□□□ 0.17
DDX55-202ENST00000354291 NEMP1O14524 444 aa16.14■□□□□ 0.17
DDX55-202ENST00000354291 P4HA2O15460 535 aa16.14■□□□□ 0.17
DDX55-202ENST00000354291 SART1O43290 800 aaKnown RBP16.14■□□□□ 0.17
DDX55-202ENST00000354291 CCR10P46092 362 aa16.14■□□□□ 0.17
DDX55-202ENST00000354291 PITX1P78337 314 aaPredicted RBP16.14■□□□□ 0.17
DDX55-202ENST00000354291 AUHQ13825 339 aaKnown RBP16.14■□□□□ 0.17
DDX55-202ENST00000354291 TTI2Q6NXR4 508 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms