RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 ABCB1P08183 1280 aaPredicted RBP13.85□□□□□ -0.19
SMC6-201ENST00000351948 ANKS6Q68DC2 871 aa13.85□□□□□ -0.19
SMC6-201ENST00000351948 GPSM1Q86YR5 675 aa13.85□□□□□ -0.19
SMC6-201ENST00000351948 RNF148Q8N7C7 305 aa13.85□□□□□ -0.19
SMC6-201ENST00000351948 TMEM40Q8WWA1 233 aa13.85□□□□□ -0.19
SMC6-201ENST00000351948 PAAF1Q9BRP4 392 aa13.85□□□□□ -0.19
SMC6-201ENST00000351948 GID8Q9NWU2 228 aa13.85□□□□□ -0.19
SMC6-201ENST00000351948 FBXO5Q9UKT4 447 aa13.85□□□□□ -0.19
SMC6-201ENST00000351948 PTPN9P43378 593 aa13.85□□□□□ -0.19
SMC6-201ENST00000351948 PDE1CQ14123 709 aaPredicted RBP13.85□□□□□ -0.19
SMC6-201ENST00000351948 INPP5AQ14642 412 aa13.85□□□□□ -0.19
SMC6-201ENST00000351948 PANX3Q96QZ0 392 aa13.85□□□□□ -0.19
SMC6-201ENST00000351948 CCDC3Q9BQI4 270 aa13.85□□□□□ -0.19
SMC6-201ENST00000351948 TRIM45Q9H8W5 580 aaPredicted RBP13.85□□□□□ -0.19
SMC6-201ENST00000351948 IL1R2P27930 398 aa13.85□□□□□ -0.19
SMC6-201ENST00000351948 GCKP35557 465 aa13.85□□□□□ -0.19
SMC6-201ENST00000351948 NOVP48745 357 aa13.85□□□□□ -0.19
SMC6-201ENST00000351948 CBX2Q14781 532 aaPredicted RBP13.85□□□□□ -0.19
SMC6-201ENST00000351948 KRT72Q14CN4 511 aa13.85□□□□□ -0.19
SMC6-201ENST00000351948 TRIP10Q15642 601 aa13.85□□□□□ -0.19
SMC6-201ENST00000351948 CCDC85BQ15834 202 aaPredicted RBP13.85□□□□□ -0.19
SMC6-201ENST00000351948 CCDC142Q17RM4 750 aa13.85□□□□□ -0.19
SMC6-201ENST00000351948 TEDDM1Q5T9Z0 273 aa13.85□□□□□ -0.19
SMC6-201ENST00000351948 ARHGAP17Q68EM7 881 aa13.85□□□□□ -0.19
SMC6-201ENST00000351948 AGGF1Q8N302 714 aaeCLIP13.85□□□□□ -0.19
SMC6-201ENST00000351948 ZNF75CPQ92670 426 aaPredicted RBP13.85□□□□□ -0.19
SMC6-201ENST00000351948 TCF7L2Q9NQB0 619 aa13.85□□□□□ -0.19
SMC6-201ENST00000351948 GIMAP4Q9NUV9 329 aa13.85□□□□□ -0.19
SMC6-201ENST00000351948 FAM32AQ9Y421 112 aaKnown RBP13.85□□□□□ -0.19
SMC6-201ENST00000351948 A0A1W2PPM1 405 aa13.85□□□□□ -0.19
SMC6-201ENST00000351948 SCAMP1O15126 338 aa13.85□□□□□ -0.19
SMC6-201ENST00000351948 MTA2O94776 668 aa13.85□□□□□ -0.19
SMC6-201ENST00000351948 PIGNO95427 931 aa13.85□□□□□ -0.19
SMC6-201ENST00000351948 EPHX1P07099 455 aa13.85□□□□□ -0.19
SMC6-201ENST00000351948 PRIM2P49643 509 aa13.85□□□□□ -0.19
SMC6-201ENST00000351948 CYTH1Q15438 398 aa13.85□□□□□ -0.19
SMC6-201ENST00000351948 PREPLQ4J6C6 727 aaPredicted RBP13.85□□□□□ -0.19
SMC6-201ENST00000351948 CST9Q5W186 159 aa13.85□□□□□ -0.19
SMC6-201ENST00000351948 SCARA3Q6AZY7 606 aa13.85□□□□□ -0.19
SMC6-201ENST00000351948 CRTC3Q6UUV7 619 aa13.85□□□□□ -0.19
SMC6-201ENST00000351948 SCIMPQ6UWF3 145 aa13.85□□□□□ -0.19
SMC6-201ENST00000351948 SRLQ86TD4 932 aa13.85□□□□□ -0.19
SMC6-201ENST00000351948 CYP2S1Q96SQ9 504 aa13.85□□□□□ -0.19
SMC6-201ENST00000351948 AASDHPPTQ9NRN7 309 aa13.85□□□□□ -0.19
SMC6-201ENST00000351948 ITGB4P16144 1822 aa13.85□□□□□ -0.19
SMC6-201ENST00000351948 ZBTB14O43829 449 aa13.84□□□□□ -0.19
SMC6-201ENST00000351948 UBOX5O94941 541 aa13.84□□□□□ -0.19
SMC6-201ENST00000351948 TFEBP19484 476 aa13.84□□□□□ -0.19
SMC6-201ENST00000351948 LPOP22079 712 aaPredicted RBP13.84□□□□□ -0.19
SMC6-201ENST00000351948 MC4RP32245 332 aa13.84□□□□□ -0.19
SMC6-201ENST00000351948 GDF10P55107 478 aa13.84□□□□□ -0.19
SMC6-201ENST00000351948 SEC13P55735 322 aa13.84□□□□□ -0.19
SMC6-201ENST00000351948 GNA12Q03113 381 aa13.84□□□□□ -0.19
SMC6-201ENST00000351948 GPM6BQ13491 265 aa13.84□□□□□ -0.19
SMC6-201ENST00000351948 FNDC5Q8NAU1 212 aa13.84□□□□□ -0.19
SMC6-201ENST00000351948 OR4K2Q8NGD2 314 aa13.84□□□□□ -0.19
SMC6-201ENST00000351948 EME1Q96AY2 570 aa13.84□□□□□ -0.19
SMC6-201ENST00000351948 MS4A4AQ96JQ5 239 aa13.84□□□□□ -0.19
SMC6-201ENST00000351948 SUSD3Q96L08 255 aa13.84□□□□□ -0.19
SMC6-201ENST00000351948 PIGVQ9NUD9 493 aa13.84□□□□□ -0.19
SMC6-201ENST00000351948 SH3BP4Q9P0V3 963 aa13.84□□□□□ -0.19
SMC6-201ENST00000351948 UBR2Q8IWV8 1755 aa13.84□□□□□ -0.19
SMC6-201ENST00000351948 GON4LQ3T8J9 2241 aa13.84□□□□□ -0.19
SMC6-201ENST00000351948 TTC24A2A3L6 582 aaPredicted RBP13.84□□□□□ -0.19
SMC6-201ENST00000351948 C1QTNF3-AMACRE9PGA6 284 aa13.84□□□□□ -0.19
SMC6-201ENST00000351948 UBDO15205 165 aa13.84□□□□□ -0.19
SMC6-201ENST00000351948 FLOT2Q14254 428 aa13.84□□□□□ -0.19
SMC6-201ENST00000351948 MILR1Q7Z6M3 343 aa13.84□□□□□ -0.19
SMC6-201ENST00000351948 SLC22A9Q8IVM8 553 aa13.84□□□□□ -0.19
SMC6-201ENST00000351948 CLEC4FQ8N1N0 589 aa13.84□□□□□ -0.19
SMC6-201ENST00000351948 PARVBQ9HBI1 364 aa13.84□□□□□ -0.19
SMC6-201ENST00000351948 ARHGAP26Q9UNA1 814 aa13.84□□□□□ -0.19
SMC6-201ENST00000351948 GPSM3Q9Y4H4 160 aa13.84□□□□□ -0.19
SMC6-201ENST00000351948 RASSF10A6NK89 507 aa13.84□□□□□ -0.19
SMC6-201ENST00000351948 PTPN2P17706 415 aa13.84□□□□□ -0.19
SMC6-201ENST00000351948 SOX4Q06945 474 aaPredicted RBP13.84□□□□□ -0.19
SMC6-201ENST00000351948 ABRQ12979 859 aa13.84□□□□□ -0.19
SMC6-201ENST00000351948 MPPE1Q53F39 396 aa13.84□□□□□ -0.19
SMC6-201ENST00000351948 CNKSR3Q6P9H4 555 aa13.84□□□□□ -0.19
SMC6-201ENST00000351948 MAMDC4Q6UXC1 1216 aa13.84□□□□□ -0.19
SMC6-201ENST00000351948 CHST9Q7L1S5 443 aa13.84□□□□□ -0.19
SMC6-201ENST00000351948 CNPY4Q8N129 248 aa13.84□□□□□ -0.19
SMC6-201ENST00000351948 ZNF557Q8N988 423 aaPredicted RBP13.84□□□□□ -0.19
SMC6-201ENST00000351948 DACT3Q96B18 629 aaPredicted RBP13.84□□□□□ -0.19
SMC6-201ENST00000351948 YIPF1Q9Y548 306 aa13.84□□□□□ -0.19
SMC6-201ENST00000351948 TBC1D3DA0A087WVF3 549 aa13.84□□□□□ -0.19
SMC6-201ENST00000351948 TBC1D3IA0A087WXS9 549 aa13.84□□□□□ -0.19
SMC6-201ENST00000351948 TBC1D3EA0A087X179 549 aa13.84□□□□□ -0.19
SMC6-201ENST00000351948 TBC1D3KA0A087X1G2 549 aa13.84□□□□□ -0.19
SMC6-201ENST00000351948 TBC1D3FA6NER0 549 aaPredicted RBP13.84□□□□□ -0.19
SMC6-201ENST00000351948 TBC1D3LB9A6J9 549 aa13.84□□□□□ -0.19
SMC6-201ENST00000351948 ELFN1P0C7U0 828 aa13.84□□□□□ -0.19
SMC6-201ENST00000351948 TBC1D3HP0C7X1 549 aa13.84□□□□□ -0.19
SMC6-201ENST00000351948 RHOQP17081 205 aa13.84□□□□□ -0.19
SMC6-201ENST00000351948 HNF4AP41235 474 aa13.84□□□□□ -0.19
SMC6-201ENST00000351948 NFYCQ13952 458 aa13.84□□□□□ -0.19
SMC6-201ENST00000351948 CCDC153Q494R4 210 aa13.84□□□□□ -0.19
SMC6-201ENST00000351948 TBC1D3GQ6DHY5 549 aa13.84□□□□□ -0.19
SMC6-201ENST00000351948 TBC1D3CQ6IPX1 549 aa13.84□□□□□ -0.19
SMC6-201ENST00000351948 SUGP1Q8IWZ8 645 aaKnown RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms