RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 CATSPEREQ5SY80 951 aa13.4□□□□□ -0.26
IFT88-202ENST00000351808 OTOP3Q7RTS5 596 aa13.4□□□□□ -0.26
IFT88-202ENST00000351808 ANGPTL6Q8NI99 470 aa13.4□□□□□ -0.26
IFT88-202ENST00000351808 MAGEE2Q8TD90 523 aaPredicted RBP13.4□□□□□ -0.26
IFT88-202ENST00000351808 C9orf16Q9BUW7 83 aa13.4□□□□□ -0.26
IFT88-202ENST00000351808 RPAP3Q9H6T3 665 aaPredicted RBP13.4□□□□□ -0.26
IFT88-202ENST00000351808 ADPRHL2Q9NX46 363 aa13.4□□□□□ -0.26
IFT88-202ENST00000351808 NHSQ6T4R5 1651 aa13.4□□□□□ -0.26
IFT88-202ENST00000351808 IGLV3-22A0A075B6J6 115 aa13.4□□□□□ -0.26
IFT88-202ENST00000351808 LRCH4O75427 683 aa13.4□□□□□ -0.26
IFT88-202ENST00000351808 TFEBP19484 476 aa13.4□□□□□ -0.26
IFT88-202ENST00000351808 ACO1P21399 889 aaKnown RBP13.4□□□□□ -0.26
IFT88-202ENST00000351808 HOXD10P28358 340 aa13.4□□□□□ -0.26
IFT88-202ENST00000351808 ALDH4A1P30038 563 aa13.4□□□□□ -0.26
IFT88-202ENST00000351808 PRELPP51888 382 aa13.4□□□□□ -0.26
IFT88-202ENST00000351808 GSTO1P78417 241 aa13.4□□□□□ -0.26
IFT88-202ENST00000351808 MPP1Q00013 466 aa13.4□□□□□ -0.26
IFT88-202ENST00000351808 PPIL2Q13356 520 aa13.4□□□□□ -0.26
IFT88-202ENST00000351808 LAMC2Q13753 1193 aa13.4□□□□□ -0.26
IFT88-202ENST00000351808 NFE2Q16621 373 aaPredicted RBP13.4□□□□□ -0.26
IFT88-202ENST00000351808 ERFEQ4G0M1 354 aa13.4□□□□□ -0.26
IFT88-202ENST00000351808 NEK10Q6ZWH5 1172 aa13.4□□□□□ -0.26
IFT88-202ENST00000351808 TFAP2DQ7Z6R9 452 aa13.4□□□□□ -0.26
IFT88-202ENST00000351808 THNSL1Q8IYQ7 743 aa13.4□□□□□ -0.26
IFT88-202ENST00000351808 KIAA0319LQ8IZA0 1049 aa13.4□□□□□ -0.26
IFT88-202ENST00000351808 POC5Q8NA72 575 aa13.4□□□□□ -0.26
IFT88-202ENST00000351808 MAP6Q96JE9 813 aa13.4□□□□□ -0.26
IFT88-202ENST00000351808 ZNF560Q96MR9 790 aa13.4□□□□□ -0.26
IFT88-202ENST00000351808 TMEM246Q9BRR3 403 aa13.4□□□□□ -0.26
IFT88-202ENST00000351808 CHID1Q9BWS9 393 aa13.4□□□□□ -0.26
IFT88-202ENST00000351808 SP140LQ9H930 580 aa13.4□□□□□ -0.26
IFT88-202ENST00000351808 MRPL40Q9NQ50 206 aaKnown RBP13.4□□□□□ -0.26
IFT88-202ENST00000351808 FZD1Q9UP38 647 aa13.4□□□□□ -0.26
IFT88-202ENST00000351808 PCDHA11Q9Y5I1 949 aa13.4□□□□□ -0.26
IFT88-202ENST00000351808 TCRBV5S1A1TA0A578 114 aa13.39□□□□□ -0.27
IFT88-202ENST00000351808 LRRIQ4A6NIV6 560 aa13.39□□□□□ -0.27
IFT88-202ENST00000351808 SLC22A2O15244 555 aa13.39□□□□□ -0.27
IFT88-202ENST00000351808 GSNP06396 782 aa13.39□□□□□ -0.27
IFT88-202ENST00000351808 PSMD8P48556 350 aa13.39□□□□□ -0.27
IFT88-202ENST00000351808 LIG4P49917 911 aa13.39□□□□□ -0.27
IFT88-202ENST00000351808 LSM3P62310 102 aaKnown RBP13.39□□□□□ -0.27
IFT88-202ENST00000351808 PIGFQ07326 219 aa13.39□□□□□ -0.27
IFT88-202ENST00000351808 ILF2Q12905 390 aaKnown RBP13.39□□□□□ -0.27
IFT88-202ENST00000351808 IKQ13123 557 aaPredicted RBP13.39□□□□□ -0.27
IFT88-202ENST00000351808 C15orf59Q2T9L4 293 aaPredicted RBP13.39□□□□□ -0.27
IFT88-202ENST00000351808 WDR44Q5JSH3 913 aa13.39□□□□□ -0.27
IFT88-202ENST00000351808 TMEM236Q5W0B7 351 aa13.39□□□□□ -0.27
IFT88-202ENST00000351808 LINC00523Q86TU6 105 aa13.39□□□□□ -0.27
IFT88-202ENST00000351808 LSM14AQ8ND56 463 aaKnown RBP13.39□□□□□ -0.27
IFT88-202ENST00000351808 OR2T34Q8NGX1 318 aa13.39□□□□□ -0.27
IFT88-202ENST00000351808 ZNF516Q92618 1163 aa13.39□□□□□ -0.27
IFT88-202ENST00000351808 CITED4Q96RK1 184 aa13.39□□□□□ -0.27
IFT88-202ENST00000351808 ALOXE3Q9BYJ1 711 aa13.39□□□□□ -0.27
IFT88-202ENST00000351808 YTHDF1Q9BYJ9 559 aaKnown RBP13.39□□□□□ -0.27
IFT88-202ENST00000351808 C12orf4Q9NQ89 552 aa13.39□□□□□ -0.27
IFT88-202ENST00000351808 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.39□□□□□ -0.27
IFT88-202ENST00000351808 MOCS1Q9NZB8 636 aa13.39□□□□□ -0.27
IFT88-202ENST00000351808 PAK5Q9P286 719 aa13.39□□□□□ -0.27
IFT88-202ENST00000351808 CDYLQ9Y232 598 aa13.39□□□□□ -0.27
IFT88-202ENST00000351808 MAU2Q9Y6X3 613 aa13.39□□□□□ -0.27
IFT88-202ENST00000351808 TRIM13O60858 407 aa13.39□□□□□ -0.27
IFT88-202ENST00000351808 ABCB7O75027 752 aa13.39□□□□□ -0.27
IFT88-202ENST00000351808 GPC4O75487 556 aa13.39□□□□□ -0.27
IFT88-202ENST00000351808 STAM2O75886 525 aa13.39□□□□□ -0.27
IFT88-202ENST00000351808 KRT6AP02538 564 aa13.39□□□□□ -0.27
IFT88-202ENST00000351808 KRT6BP04259 564 aa13.39□□□□□ -0.27
IFT88-202ENST00000351808 RPL14P50914 215 aaKnown RBP13.39□□□□□ -0.27
IFT88-202ENST00000351808 CLCNKBP51801 687 aa13.39□□□□□ -0.27
IFT88-202ENST00000351808 UBXN2AP68543 259 aa13.39□□□□□ -0.27
IFT88-202ENST00000351808 CRADDP78560 199 aa13.39□□□□□ -0.27
IFT88-202ENST00000351808 GTF2BQ00403 316 aa13.39□□□□□ -0.27
IFT88-202ENST00000351808 SLC12A1Q13621 1099 aa13.39□□□□□ -0.27
IFT88-202ENST00000351808 ATP6AP1Q15904 470 aa13.39□□□□□ -0.27
IFT88-202ENST00000351808 CTF1Q16619 201 aa13.39□□□□□ -0.27
IFT88-202ENST00000351808 AOC3Q16853 763 aa13.39□□□□□ -0.27
IFT88-202ENST00000351808 EML3Q32P44 896 aa13.39□□□□□ -0.27
IFT88-202ENST00000351808 CMTR2Q8IYT2 770 aaKnown RBP13.39□□□□□ -0.27
IFT88-202ENST00000351808 SHCBP1Q8NEM2 672 aa13.39□□□□□ -0.27
IFT88-202ENST00000351808 TMEM174Q8WUU8 243 aa13.39□□□□□ -0.27
IFT88-202ENST00000351808 MUS81Q96NY9 551 aa13.39□□□□□ -0.27
IFT88-202ENST00000351808 ADNPQ9H2P0 1102 aa13.39□□□□□ -0.27
IFT88-202ENST00000351808 RUBCNLQ9H714 662 aa13.39□□□□□ -0.27
IFT88-202ENST00000351808 CCM2LQ9NUG4 571 aaPredicted RBP13.39□□□□□ -0.27
IFT88-202ENST00000351808 SMPD3Q9NY59 655 aaPredicted RBP13.39□□□□□ -0.27
IFT88-202ENST00000351808 CD300AQ9UGN4 299 aa13.39□□□□□ -0.27
IFT88-202ENST00000351808 EIF3LQ9Y262 564 aaKnown RBP13.39□□□□□ -0.27
IFT88-202ENST00000351808 HES2Q9Y543 173 aa13.39□□□□□ -0.27
IFT88-202ENST00000351808 ZBBXA8MT70 800 aa13.38□□□□□ -0.27
IFT88-202ENST00000351808 G3V2L1 256 aa13.38□□□□□ -0.27
IFT88-202ENST00000351808 ERVH48-1M5A8F1 160 aa13.38□□□□□ -0.27
IFT88-202ENST00000351808 PIGNO95427 931 aa13.38□□□□□ -0.27
IFT88-202ENST00000351808 ASNSP08243 561 aa13.38□□□□□ -0.27
IFT88-202ENST00000351808 KRT7P08729 469 aa13.38□□□□□ -0.27
IFT88-202ENST00000351808 CYP24A1Q07973 514 aa13.38□□□□□ -0.27
IFT88-202ENST00000351808 INSCQ1MX18 579 aa13.38□□□□□ -0.27
IFT88-202ENST00000351808 DESI1Q6ICB0 168 aa13.38□□□□□ -0.27
IFT88-202ENST00000351808 PMF1Q6P1K2 205 aa13.38□□□□□ -0.27
IFT88-202ENST00000351808 CASC4Q6P4E1 433 aa13.38□□□□□ -0.27
IFT88-202ENST00000351808 GATAD2AQ86YP4 633 aa13.38□□□□□ -0.27
IFT88-202ENST00000351808 CCDC103Q8IW40 242 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms