RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 GSNP06396 782 aa10.78□□□□□ -0.68
CAPN3-203ENST00000349748 FOSL1P15407 271 aa10.78□□□□□ -0.68
CAPN3-203ENST00000349748 RHDQ02161 417 aa10.78□□□□□ -0.68
CAPN3-203ENST00000349748 LAMC2Q13753 1193 aa10.78□□□□□ -0.68
CAPN3-203ENST00000349748 GNA13Q14344 377 aa10.78□□□□□ -0.68
CAPN3-203ENST00000349748 BMT2Q1RMZ1 405 aa10.78□□□□□ -0.68
CAPN3-203ENST00000349748 SLC36A3Q495N2 470 aa10.78□□□□□ -0.68
CAPN3-203ENST00000349748 TMEM198Q66K66 360 aa10.78□□□□□ -0.68
CAPN3-203ENST00000349748 SLC16A12Q6ZSM3 486 aa10.78□□□□□ -0.68
CAPN3-203ENST00000349748 LYSMD2Q8IV50 215 aa10.78□□□□□ -0.68
CAPN3-203ENST00000349748 SP8Q8IXZ3 490 aa10.78□□□□□ -0.68
CAPN3-203ENST00000349748 KATNAL2Q8IYT4 538 aa10.78□□□□□ -0.68
CAPN3-203ENST00000349748 SLC22A15Q8IZD6 547 aa10.78□□□□□ -0.68
CAPN3-203ENST00000349748 FLCNQ8NFG4 579 aa10.78□□□□□ -0.68
CAPN3-203ENST00000349748 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.78□□□□□ -0.68
CAPN3-203ENST00000349748 TOR3AQ9H497 397 aa10.78□□□□□ -0.68
CAPN3-203ENST00000349748 GPRC5CQ9NQ84 441 aa10.78□□□□□ -0.68
CAPN3-203ENST00000349748 TIGARQ9NQ88 270 aa10.78□□□□□ -0.68
CAPN3-203ENST00000349748 COPG2Q9UBF2 871 aa10.78□□□□□ -0.68
CAPN3-203ENST00000349748 AP3M1Q9Y2T2 418 aa10.78□□□□□ -0.68
CAPN3-203ENST00000349748 HMX2A2RU54 273 aa10.78□□□□□ -0.68
CAPN3-203ENST00000349748 CCDC159P0C7I6 412 aa10.78□□□□□ -0.68
CAPN3-203ENST00000349748 HTR1BP28222 390 aa10.78□□□□□ -0.68
CAPN3-203ENST00000349748 RPL22P35268 128 aaKnown RBP10.78□□□□□ -0.68
CAPN3-203ENST00000349748 HCAR3P49019 387 aa10.78□□□□□ -0.68
CAPN3-203ENST00000349748 HLCSP50747 726 aa10.78□□□□□ -0.68
CAPN3-203ENST00000349748 IL1RL1Q01638 556 aa10.78□□□□□ -0.68
CAPN3-203ENST00000349748 PIGFQ07326 219 aa10.78□□□□□ -0.68
CAPN3-203ENST00000349748 ORC2Q13416 577 aaPredicted RBP10.78□□□□□ -0.68
CAPN3-203ENST00000349748 TAF12Q16514 161 aa10.78□□□□□ -0.68
CAPN3-203ENST00000349748 AASDHQ4L235 1098 aaPredicted RBP10.78□□□□□ -0.68
CAPN3-203ENST00000349748 C6orf10Q5SRN2 563 aa10.78□□□□□ -0.68
CAPN3-203ENST00000349748 C6orf132Q5T0Z8 1188 aa10.78□□□□□ -0.68
CAPN3-203ENST00000349748 WDR78Q5VTH9 848 aa10.78□□□□□ -0.68
CAPN3-203ENST00000349748 PMF1Q6P1K2 205 aa10.78□□□□□ -0.68
CAPN3-203ENST00000349748 TCAIMQ8N3R3 496 aa10.78□□□□□ -0.68
CAPN3-203ENST00000349748 ZNF781Q8N8C0 355 aa10.78□□□□□ -0.68
CAPN3-203ENST00000349748 SIMC1Q8NDZ2 872 aa10.78□□□□□ -0.68
CAPN3-203ENST00000349748 LPGAT1Q92604 370 aa10.78□□□□□ -0.68
CAPN3-203ENST00000349748 FKBP10Q96AY3 582 aa10.78□□□□□ -0.68
CAPN3-203ENST00000349748 MOCOSQ96EN8 888 aa10.78□□□□□ -0.68
CAPN3-203ENST00000349748 APBA2Q99767 749 aa10.78□□□□□ -0.68
CAPN3-203ENST00000349748 TM9SF2Q99805 663 aa10.78□□□□□ -0.68
CAPN3-203ENST00000349748 MCMBPQ9BTE3 642 aa10.78□□□□□ -0.68
CAPN3-203ENST00000349748 C1QTNF7Q9BXJ2 289 aa10.78□□□□□ -0.68
CAPN3-203ENST00000349748 DBNDD1Q9H9R9 158 aa10.78□□□□□ -0.68
CAPN3-203ENST00000349748 SPON1Q9HCB6 807 aa10.78□□□□□ -0.68
CAPN3-203ENST00000349748 WASH6PQ9NQA3 447 aa10.78□□□□□ -0.68
CAPN3-203ENST00000349748 GMPR2Q9P2T1 348 aaKnown RBP10.78□□□□□ -0.68
CAPN3-203ENST00000349748 EMCNQ9ULC0 261 aa10.78□□□□□ -0.68
CAPN3-203ENST00000349748 PCDHGC3Q9UN70 934 aa10.78□□□□□ -0.68
CAPN3-203ENST00000349748 PMF1-BGLAPU3KQ54 211 aa10.78□□□□□ -0.68
CAPN3-203ENST00000349748 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.77□□□□□ -0.68
CAPN3-203ENST00000349748 FADS2P1A8MWK0 482 aa10.77□□□□□ -0.68
CAPN3-203ENST00000349748 RNF103O00237 685 aa10.77□□□□□ -0.68
CAPN3-203ENST00000349748 AP3D1O14617 1153 aa10.77□□□□□ -0.68
CAPN3-203ENST00000349748 GRIN3BO60391 1043 aa10.77□□□□□ -0.68
CAPN3-203ENST00000349748 CSH1P0DML2 217 aa10.77□□□□□ -0.68
CAPN3-203ENST00000349748 CSH2P0DML3 217 aa10.77□□□□□ -0.68
CAPN3-203ENST00000349748 ATP2B4P23634 1241 aa10.77□□□□□ -0.68
CAPN3-203ENST00000349748 CRHR1P34998 444 aa10.77□□□□□ -0.68
CAPN3-203ENST00000349748 SLC26A3P40879 764 aa10.77□□□□□ -0.68
CAPN3-203ENST00000349748 SELPLGQ14242 412 aa10.77□□□□□ -0.68
CAPN3-203ENST00000349748 ACAP2Q15057 778 aa10.77□□□□□ -0.68
CAPN3-203ENST00000349748 PON2Q15165 354 aa10.77□□□□□ -0.68
CAPN3-203ENST00000349748 N4BP2L1Q5TBK1 243 aaPredicted RBP10.77□□□□□ -0.68
CAPN3-203ENST00000349748 STEAP3Q658P3 488 aa10.77□□□□□ -0.68
CAPN3-203ENST00000349748 TTLL6Q8N841 843 aa10.77□□□□□ -0.68
CAPN3-203ENST00000349748 NDNFQ8TB73 568 aa10.77□□□□□ -0.68
CAPN3-203ENST00000349748 GIMAP5Q96F15 307 aa10.77□□□□□ -0.68
CAPN3-203ENST00000349748 VMP1Q96GC9 406 aa10.77□□□□□ -0.68
CAPN3-203ENST00000349748 CNDP2Q96KP4 475 aaKnown RBP10.77□□□□□ -0.68
CAPN3-203ENST00000349748 DACH2Q96NX9 599 aa10.77□□□□□ -0.68
CAPN3-203ENST00000349748 PCIF1Q9H4Z3 704 aa10.77□□□□□ -0.68
CAPN3-203ENST00000349748 VPS28Q9UK41 221 aa10.77□□□□□ -0.68
CAPN3-203ENST00000349748 ARPC4-TTLL3A0A0A6YYG9 625 aa10.77□□□□□ -0.69
CAPN3-203ENST00000349748 LRRIQ4A6NIV6 560 aa10.77□□□□□ -0.69
CAPN3-203ENST00000349748 PSTPIP1O43586 416 aa10.77□□□□□ -0.69
CAPN3-203ENST00000349748 KRT1P04264 644 aa10.77□□□□□ -0.69
CAPN3-203ENST00000349748 SMARCB1Q12824 385 aa10.77□□□□□ -0.69
CAPN3-203ENST00000349748 TTBK2Q6IQ55 1244 aa10.77□□□□□ -0.69
CAPN3-203ENST00000349748 ZNF773Q6PK81 442 aa10.77□□□□□ -0.69
CAPN3-203ENST00000349748 FAM83FQ8NEG4 500 aaPredicted RBP10.77□□□□□ -0.69
CAPN3-203ENST00000349748 SLC39A13Q96H72 371 aa10.77□□□□□ -0.69
CAPN3-203ENST00000349748 SLITRK1Q96PX8 696 aa10.77□□□□□ -0.69
CAPN3-203ENST00000349748 SCPEP1Q9HB40 452 aa10.77□□□□□ -0.69
CAPN3-203ENST00000349748 POLMQ9NP87 494 aaPredicted RBP10.77□□□□□ -0.69
CAPN3-203ENST00000349748 CHST12Q9NRB3 414 aa10.77□□□□□ -0.69
CAPN3-203ENST00000349748 KCND2Q9NZV8 630 aa10.77□□□□□ -0.69
CAPN3-203ENST00000349748 HCN4Q9Y3Q4 1203 aa10.77□□□□□ -0.69
CAPN3-203ENST00000349748 COL24A1Q17RW2 1714 aa10.77□□□□□ -0.69
CAPN3-203ENST00000349748 TISP43B9A030 160 aa10.77□□□□□ -0.69
CAPN3-203ENST00000349748 INO80B-WBP1J3KQ70 363 aa10.77□□□□□ -0.69
CAPN3-203ENST00000349748 TRIM38O00635 465 aa10.77□□□□□ -0.69
CAPN3-203ENST00000349748 SSX4O60224 188 aa10.77□□□□□ -0.69
CAPN3-203ENST00000349748 C1QAP02745 245 aa10.77□□□□□ -0.69
CAPN3-203ENST00000349748 UQCRC1P31930 480 aa10.77□□□□□ -0.69
CAPN3-203ENST00000349748 PSMC5P62195 406 aa10.77□□□□□ -0.69
CAPN3-203ENST00000349748 C1QBPQ07021 282 aaKnown RBP10.77□□□□□ -0.69
CAPN3-203ENST00000349748 ILF2Q12905 390 aaKnown RBP10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms