RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 FBXO21O94952 628 aa11.21□□□□□ -0.62
SMARCE1-202ENST00000348513 VCLP18206 1134 aa11.21□□□□□ -0.62
SMARCE1-202ENST00000348513 PSEN2P49810 448 aa11.21□□□□□ -0.62
SMARCE1-202ENST00000348513 CASP7P55210 303 aa11.21□□□□□ -0.62
SMARCE1-202ENST00000348513 SLC39A12Q504Y0 691 aa11.21□□□□□ -0.62
SMARCE1-202ENST00000348513 ZNF574Q6ZN55 896 aaPredicted RBP11.21□□□□□ -0.62
SMARCE1-202ENST00000348513 C16orf59Q7L2K0 433 aa11.21□□□□□ -0.62
SMARCE1-202ENST00000348513 TMC3Q7Z5M5 1100 aa11.21□□□□□ -0.62
SMARCE1-202ENST00000348513 DHRSXQ8N5I4 330 aa11.21□□□□□ -0.62
SMARCE1-202ENST00000348513 COPS4Q9BT78 406 aa11.21□□□□□ -0.62
SMARCE1-202ENST00000348513 PRKAG3Q9UGI9 489 aa11.21□□□□□ -0.62
SMARCE1-202ENST00000348513 TPRKBQ9Y3C4 175 aa11.21□□□□□ -0.62
SMARCE1-202ENST00000348513 MANSC4A6NHS7 340 aaPredicted RBP11.2□□□□□ -0.62
SMARCE1-202ENST00000348513 RNASEH1O60930 286 aaKnown RBP11.2□□□□□ -0.62
SMARCE1-202ENST00000348513 PROSCO94903 275 aa11.2□□□□□ -0.62
SMARCE1-202ENST00000348513 NPR3P17342 541 aa11.2□□□□□ -0.62
SMARCE1-202ENST00000348513 TCEA1P23193 301 aaKnown RBP11.2□□□□□ -0.62
SMARCE1-202ENST00000348513 GRSF1Q12849 480 aaKnown RBP eCLIP11.2□□□□□ -0.62
SMARCE1-202ENST00000348513 CSHL1Q14406 222 aa11.2□□□□□ -0.62
SMARCE1-202ENST00000348513 ZSWIM7Q19AV6 140 aa11.2□□□□□ -0.62
SMARCE1-202ENST00000348513 ZNF829Q3KNS6 432 aaPredicted RBP11.2□□□□□ -0.62
SMARCE1-202ENST00000348513 C14orf80Q86SX3 495 aa11.2□□□□□ -0.62
SMARCE1-202ENST00000348513 POU5F2Q8N7G0 328 aa11.2□□□□□ -0.62
SMARCE1-202ENST00000348513 AMER2Q8N7J2 671 aa11.2□□□□□ -0.62
SMARCE1-202ENST00000348513 BTBD9Q96Q07 612 aa11.2□□□□□ -0.62
SMARCE1-202ENST00000348513 CLPBQ9H078 707 aa11.2□□□□□ -0.62
SMARCE1-202ENST00000348513 USE1Q9NZ43 259 aa11.2□□□□□ -0.62
SMARCE1-202ENST00000348513 PCDHGA11Q9Y5H2 935 aa11.2□□□□□ -0.62
SMARCE1-202ENST00000348513 MST1RQ04912 1400 aa11.2□□□□□ -0.62
SMARCE1-202ENST00000348513 SCAMP3O14828 347 aaKnown RBP11.2□□□□□ -0.62
SMARCE1-202ENST00000348513 UGT1A9O60656 530 aa11.2□□□□□ -0.62
SMARCE1-202ENST00000348513 AKR1A1P14550 325 aa11.2□□□□□ -0.62
SMARCE1-202ENST00000348513 UGT1A6P19224 532 aa11.2□□□□□ -0.62
SMARCE1-202ENST00000348513 TFE3P19532 575 aaPredicted RBP11.2□□□□□ -0.62
SMARCE1-202ENST00000348513 UGT1A1P22309 533 aa11.2□□□□□ -0.62
SMARCE1-202ENST00000348513 UGT1A4P22310 534 aa11.2□□□□□ -0.62
SMARCE1-202ENST00000348513 UGT1A3P35503 534 aa11.2□□□□□ -0.62
SMARCE1-202ENST00000348513 UGT1A5P35504 534 aa11.2□□□□□ -0.62
SMARCE1-202ENST00000348513 AQP5P55064 265 aa11.2□□□□□ -0.62
SMARCE1-202ENST00000348513 ECT2LQ008S8 904 aa11.2□□□□□ -0.62
SMARCE1-202ENST00000348513 CSTF3Q12996 717 aaKnown RBP11.2□□□□□ -0.62
SMARCE1-202ENST00000348513 CENPPQ6IPU0 288 aa11.2□□□□□ -0.62
SMARCE1-202ENST00000348513 SLC27A1Q6PCB7 646 aa11.2□□□□□ -0.62
SMARCE1-202ENST00000348513 XKRXQ6PP77 449 aa11.2□□□□□ -0.62
SMARCE1-202ENST00000348513 ARL5BQ96KC2 179 aa11.2□□□□□ -0.62
SMARCE1-202ENST00000348513 NFKBIZQ9BYH8 718 aa11.2□□□□□ -0.62
SMARCE1-202ENST00000348513 FRMD8Q9BZ67 464 aaPredicted RBP11.2□□□□□ -0.62
SMARCE1-202ENST00000348513 ATXN3LQ9H3M9 355 aa11.2□□□□□ -0.62
SMARCE1-202ENST00000348513 UGT1A7Q9HAW7 530 aa11.2□□□□□ -0.62
SMARCE1-202ENST00000348513 UGT1A10Q9HAW8 530 aa11.2□□□□□ -0.62
SMARCE1-202ENST00000348513 UGT1A8Q9HAW9 530 aa11.2□□□□□ -0.62
SMARCE1-202ENST00000348513 S100A14Q9HCY8 104 aa11.2□□□□□ -0.62
SMARCE1-202ENST00000348513 PTPRHQ9HD43 1115 aa11.2□□□□□ -0.62
SMARCE1-202ENST00000348513 LRRC42Q9Y546 428 aa11.2□□□□□ -0.62
SMARCE1-202ENST00000348513 PCDHB5Q9Y5E4 795 aa11.2□□□□□ -0.62
SMARCE1-202ENST00000348513 A0A087X0B3 334 aa11.2□□□□□ -0.62
SMARCE1-202ENST00000348513 ANKRD63C9JTQ0 380 aa11.2□□□□□ -0.62
SMARCE1-202ENST00000348513 CXCL11O14625 94 aa11.2□□□□□ -0.62
SMARCE1-202ENST00000348513 FASP25445 335 aa11.2□□□□□ -0.62
SMARCE1-202ENST00000348513 PLCL1Q15111 1095 aa11.2□□□□□ -0.62
SMARCE1-202ENST00000348513 NRF1Q16656 503 aa11.2□□□□□ -0.62
SMARCE1-202ENST00000348513 FAM91A1Q658Y4 838 aa11.2□□□□□ -0.62
SMARCE1-202ENST00000348513 ZBTB46Q86UZ6 589 aa11.2□□□□□ -0.62
SMARCE1-202ENST00000348513 TICAM1Q8IUC6 712 aa11.2□□□□□ -0.62
SMARCE1-202ENST00000348513 ZNF614Q8N883 585 aa11.2□□□□□ -0.62
SMARCE1-202ENST00000348513 MKL1Q969V6 931 aa11.2□□□□□ -0.62
SMARCE1-202ENST00000348513 STOX2Q9P2F5 926 aaPredicted RBP11.2□□□□□ -0.62
SMARCE1-202ENST00000348513 RAPGEFL1Q9UHV5 662 aa11.2□□□□□ -0.62
SMARCE1-202ENST00000348513 PLA2G4CQ9UP65 541 aa11.2□□□□□ -0.62
SMARCE1-202ENST00000348513 PLA2G6O60733 806 aa11.2□□□□□ -0.62
SMARCE1-202ENST00000348513 ARHGEF15O94989 841 aa11.2□□□□□ -0.62
SMARCE1-202ENST00000348513 PRKAR1AP10644 381 aa11.2□□□□□ -0.62
SMARCE1-202ENST00000348513 RARGP13631 454 aa11.2□□□□□ -0.62
SMARCE1-202ENST00000348513 SLC16A1P53985 500 aa11.2□□□□□ -0.62
SMARCE1-202ENST00000348513 NIPAL4Q0D2K0 466 aa11.2□□□□□ -0.62
SMARCE1-202ENST00000348513 CAMK2GQ13555 558 aaPredicted RBP11.2□□□□□ -0.62
SMARCE1-202ENST00000348513 TBCELQ5QJ74 424 aa11.2□□□□□ -0.62
SMARCE1-202ENST00000348513 ABRAQ8N0Z2 381 aa11.2□□□□□ -0.62
SMARCE1-202ENST00000348513 SLC2A14Q8TDB8 520 aa11.2□□□□□ -0.62
SMARCE1-202ENST00000348513 RBM22Q9NW64 420 aaKnown RBP eCLIP11.2□□□□□ -0.62
SMARCE1-202ENST00000348513 LRRIQ1Q96JM4 1722 aa11.2□□□□□ -0.62
SMARCE1-202ENST00000348513 SH3PXD2BA1X283 911 aa11.2□□□□□ -0.62
SMARCE1-202ENST00000348513 EFCAB14O75071 495 aa11.2□□□□□ -0.62
SMARCE1-202ENST00000348513 GUCA1CO95843 209 aa11.2□□□□□ -0.62
SMARCE1-202ENST00000348513 MT-CO1P00395 513 aa11.2□□□□□ -0.62
SMARCE1-202ENST00000348513 NPPAP01160 153 aa11.2□□□□□ -0.62
SMARCE1-202ENST00000348513 ACADMP11310 421 aa11.2□□□□□ -0.62
SMARCE1-202ENST00000348513 CSNK2BP67870 215 aa11.2□□□□□ -0.62
SMARCE1-202ENST00000348513 TLDC1Q6P9B6 456 aa11.2□□□□□ -0.62
SMARCE1-202ENST00000348513 MOB2Q70IA6 237 aa11.2□□□□□ -0.62
SMARCE1-202ENST00000348513 C10orf53Q8N6V4 93 aa11.2□□□□□ -0.62
SMARCE1-202ENST00000348513 SLC5A5Q92911 643 aa11.2□□□□□ -0.62
SMARCE1-202ENST00000348513 MSANTD3Q96H12 275 aa11.2□□□□□ -0.62
SMARCE1-202ENST00000348513 UBXN6Q9BZV1 441 aa11.2□□□□□ -0.62
SMARCE1-202ENST00000348513 ZNF518BQ9C0D4 1074 aa11.2□□□□□ -0.62
SMARCE1-202ENST00000348513 SENP6Q9GZR1 1112 aaPredicted RBP11.2□□□□□ -0.62
SMARCE1-202ENST00000348513 ILKAPQ9H0C8 392 aaPredicted RBP11.2□□□□□ -0.62
SMARCE1-202ENST00000348513 COMMD8Q9NX08 183 aa11.2□□□□□ -0.62
SMARCE1-202ENST00000348513 OGDHLQ9ULD0 1010 aa11.2□□□□□ -0.62
SMARCE1-202ENST00000348513 BCL9O00512 1426 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms