RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 DSELQ8IZU8 1212 aa14.91□□□□□ -0.02
NUP50-201ENST00000347635 CENPLQ8N0S6 344 aaPredicted RBP14.91□□□□□ -0.02
NUP50-201ENST00000347635 DHRSXQ8N5I4 330 aa14.91□□□□□ -0.02
NUP50-201ENST00000347635 CRYGNQ8WXF5 182 aa14.91□□□□□ -0.02
NUP50-201ENST00000347635 CINPQ9BW66 212 aaPredicted RBP14.91□□□□□ -0.02
NUP50-201ENST00000347635 TIMM13Q9Y5L4 95 aaPredicted RBP14.91□□□□□ -0.02
NUP50-201ENST00000347635 AK5Q9Y6K8 562 aa14.91□□□□□ -0.02
NUP50-201ENST00000347635 C2orf81A6NN90 581 aa14.91□□□□□ -0.02
NUP50-201ENST00000347635 SLC25A11Q02978 314 aaKnown RBP14.91□□□□□ -0.02
NUP50-201ENST00000347635 SLC18A2Q05940 514 aa14.91□□□□□ -0.02
NUP50-201ENST00000347635 NEDD8Q15843 81 aa14.91□□□□□ -0.02
NUP50-201ENST00000347635 NEPROQ6NW34 567 aa14.91□□□□□ -0.02
NUP50-201ENST00000347635 ASRGL1Q7L266 308 aa14.91□□□□□ -0.02
NUP50-201ENST00000347635 FAM228AQ86W67 206 aa14.91□□□□□ -0.02
NUP50-201ENST00000347635 HORMAD1Q86X24 394 aa14.91□□□□□ -0.02
NUP50-201ENST00000347635 BRI3BPQ8WY22 251 aa14.91□□□□□ -0.02
NUP50-201ENST00000347635 C18orf25Q96B23 403 aaPredicted RBP14.91□□□□□ -0.02
NUP50-201ENST00000347635 SENP8Q96LD8 212 aa14.91□□□□□ -0.02
NUP50-201ENST00000347635 PIF1Q9H611 641 aa14.91□□□□□ -0.02
NUP50-201ENST00000347635 ZMYND8Q9ULU4 1186 aaPredicted RBP14.91□□□□□ -0.02
NUP50-201ENST00000347635 NENFQ9UMX5 172 aa14.91□□□□□ -0.02
NUP50-201ENST00000347635 MTF2Q9Y483 593 aaPredicted RBP14.91□□□□□ -0.02
NUP50-201ENST00000347635 EME2A4GXA9 379 aaPredicted RBP14.91□□□□□ -0.02
NUP50-201ENST00000347635 STK25O00506 426 aa14.91□□□□□ -0.02
NUP50-201ENST00000347635 VPS4BO75351 444 aa14.91□□□□□ -0.02
NUP50-201ENST00000347635 NEK2P51955 445 aa14.91□□□□□ -0.02
NUP50-201ENST00000347635 OXCT1P55809 520 aa14.91□□□□□ -0.02
NUP50-201ENST00000347635 ILF2Q12905 390 aaKnown RBP14.91□□□□□ -0.02
NUP50-201ENST00000347635 PEX6Q13608 980 aa14.91□□□□□ -0.02
NUP50-201ENST00000347635 KCNJ11Q14654 390 aa14.91□□□□□ -0.02
NUP50-201ENST00000347635 TRMT10BQ6PF06 316 aaKnown RBP14.91□□□□□ -0.02
NUP50-201ENST00000347635 STRADAQ7RTN6 431 aa14.91□□□□□ -0.02
NUP50-201ENST00000347635 RPRD1AQ96P16 312 aaPredicted RBP14.91□□□□□ -0.02
NUP50-201ENST00000347635 NPAS2Q99743 824 aa14.91□□□□□ -0.02
NUP50-201ENST00000347635 SYT11Q9BT88 431 aa14.91□□□□□ -0.02
NUP50-201ENST00000347635 RCOR3Q9P2K3 495 aaPredicted RBP14.91□□□□□ -0.02
NUP50-201ENST00000347635 RAD54BQ9Y620 910 aa14.91□□□□□ -0.02
NUP50-201ENST00000347635 MFSD11O43934 449 aa14.9□□□□□ -0.02
NUP50-201ENST00000347635 MBL2P11226 248 aaPredicted RBP14.9□□□□□ -0.02
NUP50-201ENST00000347635 DARSP14868 501 aaKnown RBP14.9□□□□□ -0.02
NUP50-201ENST00000347635 PTPN1P18031 435 aaKnown RBP14.9□□□□□ -0.02
NUP50-201ENST00000347635 PSMD7P51665 324 aa14.9□□□□□ -0.02
NUP50-201ENST00000347635 GRIK3Q13003 919 aa14.9□□□□□ -0.02
NUP50-201ENST00000347635 MARC1Q5VT66 337 aa14.9□□□□□ -0.02
NUP50-201ENST00000347635 SDE2Q6IQ49 451 aa14.9□□□□□ -0.02
NUP50-201ENST00000347635 CCDC81Q6ZN84 652 aa14.9□□□□□ -0.02
NUP50-201ENST00000347635 TTC30AQ86WT1 665 aa14.9□□□□□ -0.02
NUP50-201ENST00000347635 COL22A1Q8NFW1 1626 aaPredicted RBP14.9□□□□□ -0.02
NUP50-201ENST00000347635 BCL10O95999 233 aa14.9□□□□□ -0.02
NUP50-201ENST00000347635 C2P06681 752 aa14.9□□□□□ -0.02
NUP50-201ENST00000347635 MSX2P35548 267 aaPredicted RBP14.9□□□□□ -0.02
NUP50-201ENST00000347635 DPYSQ14117 519 aa14.9□□□□□ -0.02
NUP50-201ENST00000347635 SLC25A52Q3SY17 297 aa14.9□□□□□ -0.02
NUP50-201ENST00000347635 SGO1Q5FBB7 561 aa14.9□□□□□ -0.02
NUP50-201ENST00000347635 NOMO2Q5JPE7 1267 aa14.9□□□□□ -0.02
NUP50-201ENST00000347635 MCRS1Q96EZ8 462 aa14.9□□□□□ -0.02
NUP50-201ENST00000347635 APOL5Q9BWW9 433 aa14.9□□□□□ -0.02
NUP50-201ENST00000347635 LATS2Q9NRM7 1088 aa14.9□□□□□ -0.02
NUP50-201ENST00000347635 RNF19AQ9NV58 838 aa14.9□□□□□ -0.02
NUP50-201ENST00000347635 CDH9Q9ULB4 789 aa14.9□□□□□ -0.02
NUP50-201ENST00000347635 ST3GAL5Q9UNP4 418 aa14.9□□□□□ -0.02
NUP50-201ENST00000347635 MAP3K13O43283 966 aa14.9□□□□□ -0.02
NUP50-201ENST00000347635 FKBP9O95302 570 aa14.9□□□□□ -0.02
NUP50-201ENST00000347635 IRF1P10914 325 aa14.9□□□□□ -0.02
NUP50-201ENST00000347635 S100A5P33763 92 aa14.9□□□□□ -0.02
NUP50-201ENST00000347635 RAP1GDS1P52306 607 aa14.9□□□□□ -0.02
NUP50-201ENST00000347635 CNPY1Q3B7I2 92 aa14.9□□□□□ -0.02
NUP50-201ENST00000347635 FKBP9P1Q75LS8 142 aa14.9□□□□□ -0.02
NUP50-201ENST00000347635 NSMCE2Q96MF7 247 aa14.9□□□□□ -0.02
NUP50-201ENST00000347635 ZNF558Q96NG5 402 aa14.9□□□□□ -0.02
NUP50-201ENST00000347635 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.9□□□□□ -0.021e-8■■■■■ 27
NUP50-201ENST00000347635 CCDC154A6NI56 674 aa14.9□□□□□ -0.02
NUP50-201ENST00000347635 ERCC2P18074 760 aa14.9□□□□□ -0.02
NUP50-201ENST00000347635 IVDP26440 423 aa14.9□□□□□ -0.02
NUP50-201ENST00000347635 SH3PXD2AQ5TCZ1 1133 aa14.9□□□□□ -0.02
NUP50-201ENST00000347635 CACHD1Q5VU97 1274 aa14.9□□□□□ -0.02
NUP50-201ENST00000347635 PCDH19Q8TAB3 1148 aa14.9□□□□□ -0.02
NUP50-201ENST00000347635 COMMD8Q9NX08 183 aa14.9□□□□□ -0.02
NUP50-201ENST00000347635 POMPQ9Y244 141 aa14.9□□□□□ -0.02
NUP50-201ENST00000347635 NRLP54845 237 aa14.89□□□□□ -0.03
NUP50-201ENST00000347635 C21orf59P57076 290 aa14.89□□□□□ -0.03
NUP50-201ENST00000347635 CDH18Q13634 790 aa14.89□□□□□ -0.03
NUP50-201ENST00000347635 FAM98BQ52LJ0 330 aaKnown RBP14.89□□□□□ -0.03
NUP50-201ENST00000347635 OTUD3Q5T2D3 398 aaPredicted RBP14.89□□□□□ -0.03
NUP50-201ENST00000347635 FBXO39Q8N4B4 442 aa14.89□□□□□ -0.03
NUP50-201ENST00000347635 B3GALNT2Q8NCR0 500 aa14.89□□□□□ -0.03
NUP50-201ENST00000347635 CMASQ8NFW8 434 aaPredicted RBP14.89□□□□□ -0.03
NUP50-201ENST00000347635 SKA1Q96BD8 255 aa14.89□□□□□ -0.03
NUP50-201ENST00000347635 STK39Q9UEW8 545 aa14.89□□□□□ -0.03
NUP50-201ENST00000347635 SF3B1O75533 1304 aaKnown RBP eCLIP14.89□□□□□ -0.031e-7■■■■■ 124.1
NUP50-201ENST00000347635 CXorf49A8MYA2 514 aaPredicted RBP14.89□□□□□ -0.03
NUP50-201ENST00000347635 CCDC166P0CW27 439 aa14.89□□□□□ -0.03
NUP50-201ENST00000347635 TUBP50607 506 aa14.89□□□□□ -0.03
NUP50-201ENST00000347635 RENBPP51606 427 aa14.89□□□□□ -0.03
NUP50-201ENST00000347635 MRPS5P82675 430 aaKnown RBP14.89□□□□□ -0.03
NUP50-201ENST00000347635 PMF1Q6P1K2 205 aa14.89□□□□□ -0.03
NUP50-201ENST00000347635 DDX53Q86TM3 631 aaKnown RBP14.89□□□□□ -0.03
NUP50-201ENST00000347635 SPATA6LQ8N4H0 392 aa14.89□□□□□ -0.03
NUP50-201ENST00000347635 ZNF781Q8N8C0 355 aa14.89□□□□□ -0.03
NUP50-201ENST00000347635 ZMAT2Q96NC0 199 aaKnown RBP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms