RNA–Protein interactions for RNA: ENST00000346691.9

ATRIP-202, Transcript of ATR interacting protein, humanhuman

TSL 1 (best) BASIC

Gene ATRIP, Length 2,509 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRIP-202ENST00000346691 ANKRD33Q7Z3H0 272 aa18.82■□□□□ 0.6
ATRIP-202ENST00000346691 MFSD6LQ8IWD5 586 aa18.82■□□□□ 0.6
ATRIP-202ENST00000346691 ZNF398Q8TD17 642 aa18.82■□□□□ 0.6
ATRIP-202ENST00000346691 IMP4Q96G21 291 aaKnown RBP18.82■□□□□ 0.6
ATRIP-202ENST00000346691 IGSF21Q96ID5 467 aa18.82■□□□□ 0.6
ATRIP-202ENST00000346691 ZNF512Q96ME7 567 aaPredicted RBP18.82■□□□□ 0.6
ATRIP-202ENST00000346691 C7orf26Q96N11 449 aa18.82■□□□□ 0.6
ATRIP-202ENST00000346691 ACSS2Q9NR19 701 aa18.82■□□□□ 0.6
ATRIP-202ENST00000346691 A0A0D9SEW6 157 aa18.82■□□□□ 0.6
ATRIP-202ENST00000346691 MUSKO15146 869 aa18.82■□□□□ 0.6
ATRIP-202ENST00000346691 PHGDHO43175 533 aaKnown RBP18.82■□□□□ 0.6
ATRIP-202ENST00000346691 AHSGP02765 367 aa18.82■□□□□ 0.6
ATRIP-202ENST00000346691 ARCN1P48444 511 aaKnown RBP18.82■□□□□ 0.6
ATRIP-202ENST00000346691 CCNG1P51959 295 aa18.82■□□□□ 0.6
ATRIP-202ENST00000346691 SATB1Q01826 763 aa18.82■□□□□ 0.6
ATRIP-202ENST00000346691 HNRNPDQ14103 355 aaKnown RBP18.82■□□□□ 0.6
ATRIP-202ENST00000346691 ZNF460Q14592 562 aa18.82■□□□□ 0.6
ATRIP-202ENST00000346691 USP41Q3LFD5 358 aa18.82■□□□□ 0.6
ATRIP-202ENST00000346691 ZC3HC1Q86WB0 502 aaKnown RBP18.82■□□□□ 0.6
ATRIP-202ENST00000346691 PPHLN1Q8NEY8 458 aaKnown RBP18.82■□□□□ 0.6
ATRIP-202ENST00000346691 AUTS2Q8WXX7 1259 aa18.82■□□□□ 0.6
ATRIP-202ENST00000346691 WBP2Q969T9 261 aa18.82■□□□□ 0.6
ATRIP-202ENST00000346691 ISL2Q96A47 359 aa18.82■□□□□ 0.6
ATRIP-202ENST00000346691 MOCOSQ96EN8 888 aa18.82■□□□□ 0.6
ATRIP-202ENST00000346691 UBE2OQ9C0C9 1292 aaKnown RBP18.82■□□□□ 0.6
ATRIP-202ENST00000346691 SLC25A51Q9H1U9 297 aa18.82■□□□□ 0.6
ATRIP-202ENST00000346691 ENTPD7Q9NQZ7 604 aa18.82■□□□□ 0.6
ATRIP-202ENST00000346691 GKN1Q9NS71 199 aa18.82■□□□□ 0.6
ATRIP-202ENST00000346691 CCL22O00626 93 aa18.81■□□□□ 0.6
ATRIP-202ENST00000346691 SCAMP3O14828 347 aaKnown RBP18.81■□□□□ 0.6
ATRIP-202ENST00000346691 AURKAO14965 403 aa18.81■□□□□ 0.6
ATRIP-202ENST00000346691 RAMP2O60895 175 aa18.81■□□□□ 0.6
ATRIP-202ENST00000346691 IL1BP01584 269 aa18.81■□□□□ 0.6
ATRIP-202ENST00000346691 C2P06681 752 aa18.81■□□□□ 0.6
ATRIP-202ENST00000346691 RENBPP51606 427 aa18.81■□□□□ 0.6
ATRIP-202ENST00000346691 PDPK2PQ6A1A2 396 aa18.81■□□□□ 0.6
ATRIP-202ENST00000346691 PPP1R14CQ8TAE6 165 aa18.81■□□□□ 0.6
ATRIP-202ENST00000346691 UTP4Q969X6 686 aaKnown RBP18.81■□□□□ 0.6
ATRIP-202ENST00000346691 SKA1Q96BD8 255 aa18.81■□□□□ 0.6
ATRIP-202ENST00000346691 TTLL2Q9BWV7 592 aa18.81■□□□□ 0.6
ATRIP-202ENST00000346691 SGSHP51688 502 aa18.81■□□□□ 0.6
ATRIP-202ENST00000346691 CCNHP51946 323 aaPredicted RBP18.81■□□□□ 0.6
ATRIP-202ENST00000346691 KIAA1841Q6NSI8 718 aa18.81■□□□□ 0.6
ATRIP-202ENST00000346691 SLC41A1Q8IVJ1 513 aa18.81■□□□□ 0.6
ATRIP-202ENST00000346691 TRIM42Q8IWZ5 723 aa18.81■□□□□ 0.6
ATRIP-202ENST00000346691 SLC7A6OSQ96CW6 309 aaPredicted RBP18.81■□□□□ 0.6
ATRIP-202ENST00000346691 SEZ6LQ9BYH1 1024 aa18.81■□□□□ 0.6
ATRIP-202ENST00000346691 ARL8BQ9NVJ2 186 aa18.81■□□□□ 0.6
ATRIP-202ENST00000346691 ARMCX1Q9P291 453 aa18.81■□□□□ 0.6
ATRIP-202ENST00000346691 ATP11BQ9Y2G3 1177 aa18.81■□□□□ 0.6
ATRIP-202ENST00000346691 DNAJC6O75061 913 aa18.8■□□□□ 0.6
ATRIP-202ENST00000346691 SMNDC1O75940 238 aaKnown RBP eCLIP18.8■□□□□ 0.6
ATRIP-202ENST00000346691 CDC25CP30307 473 aa18.8■□□□□ 0.6
ATRIP-202ENST00000346691 SERINC3Q13530 473 aa18.8■□□□□ 0.6
ATRIP-202ENST00000346691 SPOUT1Q5T280 376 aaKnown RBP18.8■□□□□ 0.6
ATRIP-202ENST00000346691 LRRC49Q8IUZ0 686 aa18.8■□□□□ 0.6
ATRIP-202ENST00000346691 OXCT2Q9BYC2 517 aaPredicted RBP18.8■□□□□ 0.6
ATRIP-202ENST00000346691 UNKQ9C0B0 810 aaKnown RBP18.8■□□□□ 0.6
ATRIP-202ENST00000346691 COPG2Q9UBF2 871 aa18.8■□□□□ 0.6
ATRIP-202ENST00000346691 HBS1LQ9Y450 684 aaKnown RBP18.8■□□□□ 0.6
ATRIP-202ENST00000346691 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.8■□□□□ 0.6
ATRIP-202ENST00000346691 COCHO43405 550 aa18.8■□□□□ 0.6
ATRIP-202ENST00000346691 WFS1O76024 890 aa18.8■□□□□ 0.6
ATRIP-202ENST00000346691 HMGA1P17096 107 aaKnown RBP18.8■□□□□ 0.6
ATRIP-202ENST00000346691 SLC1A2P43004 574 aa18.8■□□□□ 0.6
ATRIP-202ENST00000346691 CSE1LP55060 971 aaKnown RBP18.8■□□□□ 0.6
ATRIP-202ENST00000346691 RPS24P62847 133 aaKnown RBP18.8■□□□□ 0.6
ATRIP-202ENST00000346691 IRX1P78414 480 aaPredicted RBP18.8■□□□□ 0.6
ATRIP-202ENST00000346691 RING1Q06587 406 aa18.8■□□□□ 0.6
ATRIP-202ENST00000346691 SMARCB1Q12824 385 aa18.8■□□□□ 0.6
ATRIP-202ENST00000346691 STXBP5Q5T5C0 1151 aa18.8■□□□□ 0.6
ATRIP-202ENST00000346691 NAIF1Q69YI7 327 aaPredicted RBP18.8■□□□□ 0.6
ATRIP-202ENST00000346691 DENND1CQ8IV53 801 aa18.8■□□□□ 0.6
ATRIP-202ENST00000346691 RNF168Q8IYW5 571 aaPredicted RBP18.8■□□□□ 0.6
ATRIP-202ENST00000346691 OR7D4Q8NG98 312 aa18.8■□□□□ 0.6
ATRIP-202ENST00000346691 ARRDC2Q8TBH0 407 aa18.8■□□□□ 0.6
ATRIP-202ENST00000346691 C2orf15Q8WU43 125 aaKnown RBP18.8■□□□□ 0.6
ATRIP-202ENST00000346691 EBF4Q9BQW3 602 aa18.8■□□□□ 0.6
ATRIP-202ENST00000346691 NACA2Q9H009 215 aa18.8■□□□□ 0.6
ATRIP-202ENST00000346691 TREX1Q9NSU2 369 aa18.8■□□□□ 0.6
ATRIP-202ENST00000346691 TXLNGQ9NUQ3 528 aa18.8■□□□□ 0.6
ATRIP-202ENST00000346691 FNIP2Q9P278 1114 aa18.8■□□□□ 0.6
ATRIP-202ENST00000346691 CPSF2Q9P2I0 782 aaKnown RBP18.8■□□□□ 0.6
ATRIP-202ENST00000346691 ZNF840PA6NDX5 716 aa18.79■□□□□ 0.6
ATRIP-202ENST00000346691 KLKB1P03952 638 aa18.79■□□□□ 0.6
ATRIP-202ENST00000346691 IRF1P10914 325 aa18.79■□□□□ 0.6
ATRIP-202ENST00000346691 GLDCP23378 1020 aa18.79■□□□□ 0.6
ATRIP-202ENST00000346691 ATP5C1P36542 298 aaKnown RBP18.79■□□□□ 0.6
ATRIP-202ENST00000346691 AQP5P55064 265 aa18.79■□□□□ 0.6
ATRIP-202ENST00000346691 DEFB103AP81534 67 aa18.79■□□□□ 0.6
ATRIP-202ENST00000346691 CAPRIN2Q6IMN6 1127 aaKnown RBP18.79■□□□□ 0.6
ATRIP-202ENST00000346691 CLEC14AQ86T13 490 aa18.79■□□□□ 0.6
ATRIP-202ENST00000346691 SPATA6LQ8N4H0 392 aa18.79■□□□□ 0.6
ATRIP-202ENST00000346691 RAB3IPQ96QF0 476 aaPredicted RBP18.79■□□□□ 0.6
ATRIP-202ENST00000346691 GPR22Q99680 433 aa18.79■□□□□ 0.6
ATRIP-202ENST00000346691 DNMT3LQ9UJW3 386 aa18.79■□□□□ 0.6
ATRIP-202ENST00000346691 ZFP37Q9Y6Q3 630 aaPredicted RBP18.79■□□□□ 0.6
ATRIP-202ENST00000346691 AP3B1O00203 1094 aa18.79■□□□□ 0.6
ATRIP-202ENST00000346691 GCKP35557 465 aa18.79■□□□□ 0.6
ATRIP-202ENST00000346691 SLC1A6P48664 564 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms