RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 PIH1D1Q9NWS0 290 aaKnown RBP11.14□□□□□ -0.63
ECM1-201ENST00000346569 GDE1Q9NZC3 331 aa11.14□□□□□ -0.63
ECM1-201ENST00000346569 MARK1Q9P0L2 795 aa11.14□□□□□ -0.63
ECM1-201ENST00000346569 CLEC1BQ9P126 229 aa11.14□□□□□ -0.63
ECM1-201ENST00000346569 SLC24A2Q9UI40 661 aa11.14□□□□□ -0.63
ECM1-201ENST00000346569 VPS51Q9UID3 782 aa11.14□□□□□ -0.63
ECM1-201ENST00000346569 TTLL3Q9Y4R7 772 aa11.14□□□□□ -0.63
ECM1-201ENST00000346569 TTC24A2A3L6 582 aaPredicted RBP11.13□□□□□ -0.63
ECM1-201ENST00000346569 GOLGA6L10A6NI86 522 aa11.13□□□□□ -0.63
ECM1-201ENST00000346569 SLC9A3R1O14745 358 aaPredicted RBP11.13□□□□□ -0.63
ECM1-201ENST00000346569 CDH16O75309 829 aa11.13□□□□□ -0.63
ECM1-201ENST00000346569 PMPCBO75439 489 aa11.13□□□□□ -0.63
ECM1-201ENST00000346569 MT-CO1P00395 513 aa11.13□□□□□ -0.63
ECM1-201ENST00000346569 EPOP01588 193 aa11.13□□□□□ -0.63
ECM1-201ENST00000346569 HLA-FP30511 346 aa11.13□□□□□ -0.63
ECM1-201ENST00000346569 CD70P32970 193 aa11.13□□□□□ -0.63
ECM1-201ENST00000346569 CD86P42081 329 aa11.13□□□□□ -0.63
ECM1-201ENST00000346569 SLCO1A2P46721 670 aa11.13□□□□□ -0.63
ECM1-201ENST00000346569 RGRP47804 291 aa11.13□□□□□ -0.63
ECM1-201ENST00000346569 NUMBP49757 651 aa11.13□□□□□ -0.63
ECM1-201ENST00000346569 CRADDP78560 199 aa11.13□□□□□ -0.63
ECM1-201ENST00000346569 SLC20A2Q08357 652 aa11.13□□□□□ -0.63
ECM1-201ENST00000346569 CDH18Q13634 790 aa11.13□□□□□ -0.63
ECM1-201ENST00000346569 FRG1Q14331 258 aaKnown RBP11.13□□□□□ -0.63
ECM1-201ENST00000346569 ZNF235Q14590 738 aa11.13□□□□□ -0.63
ECM1-201ENST00000346569 CTC1Q2NKJ3 1217 aa11.13□□□□□ -0.63
ECM1-201ENST00000346569 PLEKHG6Q3KR16 790 aa11.13□□□□□ -0.63
ECM1-201ENST00000346569 FAM78AQ5JUQ0 283 aa11.13□□□□□ -0.63
ECM1-201ENST00000346569 LY6G5CQ5SRR4 150 aa11.13□□□□□ -0.63
ECM1-201ENST00000346569 KCTD16Q68DU8 428 aa11.13□□□□□ -0.63
ECM1-201ENST00000346569 ADGRD1Q6QNK2 874 aa11.13□□□□□ -0.63
ECM1-201ENST00000346569 CAPN12Q6ZSI9 719 aa11.13□□□□□ -0.63
ECM1-201ENST00000346569 CYP4X1Q8N118 509 aa11.13□□□□□ -0.63
ECM1-201ENST00000346569 BBS5Q8N3I7 341 aa11.13□□□□□ -0.63
ECM1-201ENST00000346569 RIBC1Q8N443 379 aaPredicted RBP11.13□□□□□ -0.63
ECM1-201ENST00000346569 SH2D3CQ8N5H7 860 aa11.13□□□□□ -0.63
ECM1-201ENST00000346569 DNAAF3Q8N9W5 541 aa11.13□□□□□ -0.63
ECM1-201ENST00000346569 IPMKQ8NFU5 416 aa11.13□□□□□ -0.63
ECM1-201ENST00000346569 GSDMBQ8TAX9 411 aa11.13□□□□□ -0.63
ECM1-201ENST00000346569 SMARCD2Q92925 531 aa11.13□□□□□ -0.63
ECM1-201ENST00000346569 BHMTQ93088 406 aa11.13□□□□□ -0.63
ECM1-201ENST00000346569 TTC17Q96AE7 1141 aa11.13□□□□□ -0.63
ECM1-201ENST00000346569 FCRL3Q96P31 734 aaPredicted RBP11.13□□□□□ -0.63
ECM1-201ENST00000346569 CYTH2Q99418 400 aa11.13□□□□□ -0.63
ECM1-201ENST00000346569 SEMA3CQ99985 751 aa11.13□□□□□ -0.63
ECM1-201ENST00000346569 TRIM56Q9BRZ2 755 aaKnown RBP11.13□□□□□ -0.63
ECM1-201ENST00000346569 FICDQ9BVA6 458 aa11.13□□□□□ -0.63
ECM1-201ENST00000346569 SLC2A11Q9BYW1 496 aa11.13□□□□□ -0.63
ECM1-201ENST00000346569 IL22Q9GZX6 179 aa11.13□□□□□ -0.63
ECM1-201ENST00000346569 ABCB8Q9NUT2 735 aa11.13□□□□□ -0.63
ECM1-201ENST00000346569 SYBUQ9NX95 663 aa11.13□□□□□ -0.63
ECM1-201ENST00000346569 OBP2AQ9NY56 170 aa11.13□□□□□ -0.63
ECM1-201ENST00000346569 VPS18Q9P253 973 aa11.13□□□□□ -0.63
ECM1-201ENST00000346569 CDH22Q9UJ99 828 aa11.13□□□□□ -0.63
ECM1-201ENST00000346569 VPS28Q9UK41 221 aa11.13□□□□□ -0.63
ECM1-201ENST00000346569 NOVA2Q9UNW9 492 aaKnown RBP11.13□□□□□ -0.63
ECM1-201ENST00000346569 MAD1L1Q9Y6D9 718 aa11.13□□□□□ -0.63
ECM1-201ENST00000346569 HELZP42694 1942 aaKnown RBP11.13□□□□□ -0.63
ECM1-201ENST00000346569 FAM237BA0A1B0GVD1 139 aa11.12□□□□□ -0.63
ECM1-201ENST00000346569 EXOC1LA0A1B0GW35 172 aa11.12□□□□□ -0.63
ECM1-201ENST00000346569 FAM159BA6NKW6 160 aa11.12□□□□□ -0.63
ECM1-201ENST00000346569 POLR3GO15318 223 aaPredicted RBP11.12□□□□□ -0.63
ECM1-201ENST00000346569 RGS16O15492 202 aaPredicted RBP11.12□□□□□ -0.63
ECM1-201ENST00000346569 GJB3O75712 270 aa11.12□□□□□ -0.63
ECM1-201ENST00000346569 CPP00450 1065 aa11.12□□□□□ -0.63
ECM1-201ENST00000346569 IVLP07476 585 aa11.12□□□□□ -0.63
ECM1-201ENST00000346569 TPH1P17752 444 aa11.12□□□□□ -0.63
ECM1-201ENST00000346569 PGAM1P18669 254 aa11.12□□□□□ -0.63
ECM1-201ENST00000346569 POU3F3P20264 500 aaPredicted RBP11.12□□□□□ -0.63
ECM1-201ENST00000346569 VIPR2P41587 438 aa11.12□□□□□ -0.63
ECM1-201ENST00000346569 GEMIN4P57678 1058 aaKnown RBP11.12□□□□□ -0.63
ECM1-201ENST00000346569 CBX1P83916 185 aa11.12□□□□□ -0.63
ECM1-201ENST00000346569 EML3Q32P44 896 aa11.12□□□□□ -0.63
ECM1-201ENST00000346569 KBTBD12Q3ZCT8 623 aa11.12□□□□□ -0.63
ECM1-201ENST00000346569 ANKRD20A4Q4UJ75 823 aa11.12□□□□□ -0.63
ECM1-201ENST00000346569 PCID2Q5JVF3 399 aa11.12□□□□□ -0.63
ECM1-201ENST00000346569 ARMC3Q5W041 872 aa11.12□□□□□ -0.63
ECM1-201ENST00000346569 OSCP1Q8WVF1 389 aa11.12□□□□□ -0.63
ECM1-201ENST00000346569 CFAP36Q96G28 342 aa11.12□□□□□ -0.63
ECM1-201ENST00000346569 GUCD1Q96NT3 240 aa11.12□□□□□ -0.63
ECM1-201ENST00000346569 NUDCD1Q96RS6 583 aa11.12□□□□□ -0.63
ECM1-201ENST00000346569 C2orf49Q9BVC5 232 aaPredicted RBP11.12□□□□□ -0.63
ECM1-201ENST00000346569 KIFC1Q9BW19 673 aa11.12□□□□□ -0.63
ECM1-201ENST00000346569 CINPQ9BW66 212 aaPredicted RBP11.12□□□□□ -0.63
ECM1-201ENST00000346569 APOL5Q9BWW9 433 aa11.12□□□□□ -0.63
ECM1-201ENST00000346569 NOD2Q9HC29 1040 aa11.12□□□□□ -0.63
ECM1-201ENST00000346569 SMYD2Q9NRG4 433 aa11.12□□□□□ -0.63
ECM1-201ENST00000346569 BCCIPQ9P287 314 aaKnown RBP eCLIP11.12□□□□□ -0.63
ECM1-201ENST00000346569 LHX3Q9UBR4 397 aa11.12□□□□□ -0.63
ECM1-201ENST00000346569 SOX13Q9UN79 622 aa11.12□□□□□ -0.63
ECM1-201ENST00000346569 WNT6Q9Y6F9 365 aa11.12□□□□□ -0.63
ECM1-201ENST00000346569 FAM169AQ9Y6X4 670 aa11.12□□□□□ -0.63
ECM1-201ENST00000346569 ZCWPW2A0A1B0GU75 182 aa11.11□□□□□ -0.63
ECM1-201ENST00000346569 CXorf49A8MYA2 514 aaPredicted RBP11.11□□□□□ -0.63
ECM1-201ENST00000346569 POC1B-GALNT4F8VUJ3 575 aa11.11□□□□□ -0.63
ECM1-201ENST00000346569 INSIG1O15503 277 aa11.11□□□□□ -0.63
ECM1-201ENST00000346569 ZNF821O75541 412 aaPredicted RBP11.11□□□□□ -0.63
ECM1-201ENST00000346569 TMCC1O94876 653 aa11.11□□□□□ -0.63
ECM1-201ENST00000346569 PRLP01236 227 aa11.11□□□□□ -0.63
ECM1-201ENST00000346569 SERPINF2P08697 491 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms