RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 SMIM11AP58511 58 aa23.34■■□□□ 1.33
NPAS3-201ENST00000346562 WDR59Q6PJI9 974 aa23.34■■□□□ 1.33
NPAS3-201ENST00000346562 CYP2R1Q6VVX0 501 aa23.34■■□□□ 1.33
NPAS3-201ENST00000346562 CATSPERGQ6ZRH7 1159 aa23.34■■□□□ 1.33
NPAS3-201ENST00000346562 TMC3Q7Z5M5 1100 aa23.34■■□□□ 1.33
NPAS3-201ENST00000346562 ZCCHC7Q8N3Z6 543 aaKnown RBP23.34■■□□□ 1.33
NPAS3-201ENST00000346562 DLG3Q92796 817 aa23.34■■□□□ 1.33
NPAS3-201ENST00000346562 LACRTQ9GZZ8 138 aa23.34■■□□□ 1.33
NPAS3-201ENST00000346562 NWD1Q149M9 1564 aa23.34■■□□□ 1.33
NPAS3-201ENST00000346562 TCRBV5S4A2TA0A5A2 114 aa23.34■■□□□ 1.33
NPAS3-201ENST00000346562 SIGLEC16A6NMB1 481 aa23.34■■□□□ 1.33
NPAS3-201ENST00000346562 KPNA4O00629 521 aaPredicted RBP23.34■■□□□ 1.33
NPAS3-201ENST00000346562 ATP6V1G2O95670 118 aa23.34■■□□□ 1.33
NPAS3-201ENST00000346562 PPM1AP35813 382 aa23.34■■□□□ 1.33
NPAS3-201ENST00000346562 PLK1P53350 603 aa23.34■■□□□ 1.33
NPAS3-201ENST00000346562 SQLEQ14534 574 aa23.34■■□□□ 1.33
NPAS3-201ENST00000346562 RPTNQ6XPR3 784 aa23.34■■□□□ 1.33
NPAS3-201ENST00000346562 SREK1IP1Q8N9Q2 155 aaPredicted RBP23.34■■□□□ 1.33
NPAS3-201ENST00000346562 TRAPPC9Q96Q05 1148 aa23.34■■□□□ 1.33
NPAS3-201ENST00000346562 A0A0B4J269 797 aa23.33■■□□□ 1.33
NPAS3-201ENST00000346562 BIRC5O15392 142 aa23.33■■□□□ 1.33
NPAS3-201ENST00000346562 AVILO75366 819 aa23.33■■□□□ 1.33
NPAS3-201ENST00000346562 FAM183BPQ6ZVS7 135 aa23.33■■□□□ 1.33
NPAS3-201ENST00000346562 E9PCH4 1651 aa23.33■■□□□ 1.33
NPAS3-201ENST00000346562 ABL2P42684 1182 aa23.33■■□□□ 1.33
NPAS3-201ENST00000346562 BCORL1Q5H9F3 1711 aa23.33■■□□□ 1.33
NPAS3-201ENST00000346562 ZNF549Q6P9A3 640 aa23.33■■□□□ 1.33
NPAS3-201ENST00000346562 ARMC8Q8IUR7 673 aa23.33■■□□□ 1.33
NPAS3-201ENST00000346562 MRPL42Q9Y6G3 142 aaKnown RBP23.33■■□□□ 1.33
NPAS3-201ENST00000346562 CES1P23141 567 aa23.33■■□□□ 1.33
NPAS3-201ENST00000346562 SPANXN2Q5MJ10 180 aa23.33■■□□□ 1.33
NPAS3-201ENST00000346562 HELQQ8TDG4 1101 aa23.33■■□□□ 1.33
NPAS3-201ENST00000346562 SLC35C1Q96A29 364 aa23.33■■□□□ 1.33
NPAS3-201ENST00000346562 ELMO3Q96BJ8 720 aa23.33■■□□□ 1.33
NPAS3-201ENST00000346562 CLIP3Q96DZ5 547 aa23.33■■□□□ 1.33
NPAS3-201ENST00000346562 PPP3R2Q96LZ3 170 aa23.33■■□□□ 1.33
NPAS3-201ENST00000346562 SLC38A2Q96QD8 506 aa23.33■■□□□ 1.33
NPAS3-201ENST00000346562 FERD3LQ96RJ6 166 aa23.33■■□□□ 1.33
NPAS3-201ENST00000346562 CDRT15Q96T59 188 aa23.33■■□□□ 1.33
NPAS3-201ENST00000346562 PIGUQ9H490 435 aa23.33■■□□□ 1.33
NPAS3-201ENST00000346562 HMG20AQ9NP66 347 aa23.33■■□□□ 1.33
NPAS3-201ENST00000346562 PIGNO95427 931 aa23.33■■□□□ 1.32
NPAS3-201ENST00000346562 MYLPFQ96A32 169 aa23.33■■□□□ 1.32
NPAS3-201ENST00000346562 HSFY1Q96LI6 401 aa23.33■■□□□ 1.32
NPAS3-201ENST00000346562 Q96MT0 163 aa23.33■■□□□ 1.32
NPAS3-201ENST00000346562 SLC12A4Q9UP95 1085 aa23.33■■□□□ 1.32
NPAS3-201ENST00000346562 TMEM150BA6NC51 233 aa23.32■■□□□ 1.32
NPAS3-201ENST00000346562 NEDD8Q15843 81 aa23.32■■□□□ 1.32
NPAS3-201ENST00000346562 HTATIP2Q9BUP3 242 aa23.32■■□□□ 1.32
NPAS3-201ENST00000346562 SLC27A6Q9Y2P4 619 aa23.32■■□□□ 1.32
NPAS3-201ENST00000346562 RPL9P32969 192 aaKnown RBP23.32■■□□□ 1.32
NPAS3-201ENST00000346562 ZC3H7AQ8IWR0 971 aaKnown RBP23.32■■□□□ 1.32
NPAS3-201ENST00000346562 SMYD1Q8NB12 490 aa23.32■■□□□ 1.32
NPAS3-201ENST00000346562 EEF1AKMT1Q8WVE0 214 aa23.32■■□□□ 1.32
NPAS3-201ENST00000346562 ZNF75CPQ92670 426 aaPredicted RBP23.32■■□□□ 1.32
NPAS3-201ENST00000346562 KCNK4Q9NYG8 393 aa23.32■■□□□ 1.32
NPAS3-201ENST00000346562 TPP2P29144 1249 aaPredicted RBP23.32■■□□□ 1.32
NPAS3-201ENST00000346562 ZNF143P52747 638 aaPredicted RBP23.32■■□□□ 1.32
NPAS3-201ENST00000346562 C8orf59Q8N0T1 100 aaPredicted RBP23.32■■□□□ 1.32
NPAS3-201ENST00000346562 TSPAN18Q96SJ8 248 aa23.32■■□□□ 1.32
NPAS3-201ENST00000346562 ZSCAN5CA6NGD5 496 aaPredicted RBP23.32■■□□□ 1.32
NPAS3-201ENST00000346562 MORF4L1Q9UBU8 362 aa23.32■■□□□ 1.32
NPAS3-201ENST00000346562 OR52K1Q8NGK4 314 aa23.32■■□□□ 1.32
NPAS3-201ENST00000346562 REXO5Q96IC2 774 aaKnown RBP23.32■■□□□ 1.32
NPAS3-201ENST00000346562 TTLL2Q9BWV7 592 aa23.32■■□□□ 1.32
NPAS3-201ENST00000346562 CLN6Q9NWW5 311 aa23.32■■□□□ 1.32
NPAS3-201ENST00000346562 FKTNO75072 461 aa23.31■■□□□ 1.32
NPAS3-201ENST00000346562 CEP68Q76N32 757 aa23.31■■□□□ 1.32
NPAS3-201ENST00000346562 SUCOQ9UBS9 1254 aaKnown RBP23.31■■□□□ 1.32
NPAS3-201ENST00000346562 COG5Q9UP83 839 aa23.31■■□□□ 1.32
NPAS3-201ENST00000346562 ADH1CP00326 375 aa23.31■■□□□ 1.32
NPAS3-201ENST00000346562 RPL4P36578 427 aaKnown RBP23.31■■□□□ 1.32
NPAS3-201ENST00000346562 DNAAF5Q86Y56 855 aa23.31■■□□□ 1.32
NPAS3-201ENST00000346562 PCDHGC5Q9Y5F6 944 aa23.31■■□□□ 1.32
NPAS3-201ENST00000346562 GSAPA4D1B5 854 aa23.31■■□□□ 1.32
NPAS3-201ENST00000346562 GTPBP1O00178 669 aaKnown RBP23.31■■□□□ 1.32
NPAS3-201ENST00000346562 SNUPNO95149 360 aaKnown RBP23.31■■□□□ 1.32
NPAS3-201ENST00000346562 PRG2P13727 222 aa23.31■■□□□ 1.32
NPAS3-201ENST00000346562 TXNDC11Q6PKC3 985 aa23.31■■□□□ 1.32
NPAS3-201ENST00000346562 PRR23CQ6ZRP0 262 aa23.31■■□□□ 1.32
NPAS3-201ENST00000346562 CYLDQ9NQC7 956 aa23.31■■□□□ 1.32
NPAS3-201ENST00000346562 VPS45Q9NRW7 570 aa23.31■■□□□ 1.32
NPAS3-201ENST00000346562 BTBD7Q9P203 1132 aa23.31■■□□□ 1.32
NPAS3-201ENST00000346562 USP12O75317 370 aa23.31■■□□□ 1.32
NPAS3-201ENST00000346562 IL1BP01584 269 aa23.31■■□□□ 1.32
NPAS3-201ENST00000346562 CCNB1P14635 433 aa23.31■■□□□ 1.32
NPAS3-201ENST00000346562 ADGRG2Q8IZP9 1017 aa23.31■■□□□ 1.32
NPAS3-201ENST00000346562 PTGR2Q8N8N7 351 aaPredicted RBP23.31■■□□□ 1.32
NPAS3-201ENST00000346562 OR8D1Q8WZ84 308 aa23.31■■□□□ 1.32
NPAS3-201ENST00000346562 ALOX12P18054 663 aa23.3■■□□□ 1.32
NPAS3-201ENST00000346562 DNAJC18Q9H819 358 aa23.3■■□□□ 1.32
NPAS3-201ENST00000346562 FBXO6Q9NRD1 293 aaPredicted RBP23.3■■□□□ 1.32
NPAS3-201ENST00000346562 XKR6Q5GH73 641 aa23.3■■□□□ 1.32
NPAS3-201ENST00000346562 DACT2Q5SW24 774 aa23.3■■□□□ 1.32
NPAS3-201ENST00000346562 CXCL17Q6UXB2 119 aa23.3■■□□□ 1.32
NPAS3-201ENST00000346562 ZCCHC23Q6ZST2 131 aa23.3■■□□□ 1.32
NPAS3-201ENST00000346562 TTC7BQ86TV6 843 aa23.3■■□□□ 1.32
NPAS3-201ENST00000346562 ERCC6L2Q5T890 1561 aa23.3■■□□□ 1.32
NPAS3-201ENST00000346562 CACNB4O00305 520 aaPredicted RBP23.3■■□□□ 1.32
NPAS3-201ENST00000346562 DCXO43602 365 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms