RNA–Protein interactions for RNA: ENST00000346330.6

UBE2A-201, Transcript of ubiquitin conjugating enzyme E2 A, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2A, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2A-201ENST00000346330 DYRK4Q9NR20 520 aa11.15□□□□□ -0.62
UBE2A-201ENST00000346330 OR12D3Q9UGF7 316 aa11.15□□□□□ -0.62
UBE2A-201ENST00000346330 DNAI1Q9UI46 699 aa11.15□□□□□ -0.62
UBE2A-201ENST00000346330 FARP1Q9Y4F1 1045 aaPredicted RBP11.15□□□□□ -0.62
UBE2A-201ENST00000346330 COL27A1Q8IZC6 1860 aaPredicted RBP11.15□□□□□ -0.63
UBE2A-201ENST00000346330 PTPRQQ9UMZ3 2332 aa11.14□□□□□ -0.63
UBE2A-201ENST00000346330 C2CD4BA6NLJ0 364 aa11.14□□□□□ -0.63
UBE2A-201ENST00000346330 A6NNZ2 444 aa11.14□□□□□ -0.63
UBE2A-201ENST00000346330 MAGEC1O60732 1142 aa11.14□□□□□ -0.63
UBE2A-201ENST00000346330 LRIG2O94898 1065 aa11.14□□□□□ -0.63
UBE2A-201ENST00000346330 CKMT1AP12532 417 aa11.14□□□□□ -0.63
UBE2A-201ENST00000346330 L1CAMP32004 1257 aa11.14□□□□□ -0.63
UBE2A-201ENST00000346330 DAB2P98082 770 aa11.14□□□□□ -0.63
UBE2A-201ENST00000346330 TLE3Q04726 772 aa11.14□□□□□ -0.63
UBE2A-201ENST00000346330 CCDC173Q0VFZ6 552 aa11.14□□□□□ -0.63
UBE2A-201ENST00000346330 EIF2B5Q13144 721 aaKnown RBP11.14□□□□□ -0.63
UBE2A-201ENST00000346330 RWDD4Q6NW29 188 aaKnown RBP11.14□□□□□ -0.63
UBE2A-201ENST00000346330 GUSBP11Q6P575 273 aa11.14□□□□□ -0.63
UBE2A-201ENST00000346330 PCSK4Q6UW60 755 aa11.14□□□□□ -0.63
UBE2A-201ENST00000346330 RBFAQ8N0V3 343 aa11.14□□□□□ -0.63
UBE2A-201ENST00000346330 PCDH20Q8N6Y1 951 aaKnown RBP11.14□□□□□ -0.63
UBE2A-201ENST00000346330 ZNF548Q8NEK5 533 aaPredicted RBP11.14□□□□□ -0.63
UBE2A-201ENST00000346330 SNIP1Q8TAD8 396 aaKnown RBP11.14□□□□□ -0.63
UBE2A-201ENST00000346330 ARHGEF2Q92974 986 aaKnown RBP11.14□□□□□ -0.63
UBE2A-201ENST00000346330 NAF1Q96HR8 494 aaKnown RBP11.14□□□□□ -0.63
UBE2A-201ENST00000346330 C1QTNF2Q9BXJ5 285 aa11.14□□□□□ -0.63
UBE2A-201ENST00000346330 CEP44Q9C0F1 390 aa11.14□□□□□ -0.63
UBE2A-201ENST00000346330 VPS16Q9H269 839 aa11.14□□□□□ -0.63
UBE2A-201ENST00000346330 NLRC4Q9NPP4 1024 aa11.14□□□□□ -0.63
UBE2A-201ENST00000346330 FAM207AQ9NSI2 230 aaPredicted RBP11.14□□□□□ -0.63
UBE2A-201ENST00000346330 PPARGC1AQ9UBK2 798 aaKnown RBP11.14□□□□□ -0.63
UBE2A-201ENST00000346330 FLNBO75369 2602 aaKnown RBP11.14□□□□□ -0.63
UBE2A-201ENST00000346330 ZNF462Q96JM2 2506 aa11.13□□□□□ -0.63
UBE2A-201ENST00000346330 SPTY2D1-AS1A0A0U1RR47 76 aa11.13□□□□□ -0.63
UBE2A-201ENST00000346330 C16orf96A6NNT2 1141 aa11.13□□□□□ -0.63
UBE2A-201ENST00000346330 KRIT1O00522 736 aa11.13□□□□□ -0.63
UBE2A-201ENST00000346330 SCAMP1O15126 338 aa11.13□□□□□ -0.63
UBE2A-201ENST00000346330 GCATO75600 419 aa11.13□□□□□ -0.63
UBE2A-201ENST00000346330 CSF2P04141 144 aa11.13□□□□□ -0.63
UBE2A-201ENST00000346330 UGT2B4P06133 528 aa11.13□□□□□ -0.63
UBE2A-201ENST00000346330 CELA2BP08218 269 aaPredicted RBP11.13□□□□□ -0.63
UBE2A-201ENST00000346330 CDK4P11802 303 aa11.13□□□□□ -0.63
UBE2A-201ENST00000346330 NME1P15531 152 aaKnown RBP11.13□□□□□ -0.63
UBE2A-201ENST00000346330 TGM2P21980 687 aa11.13□□□□□ -0.63
UBE2A-201ENST00000346330 RFC1P35251 1148 aaPredicted RBP11.13□□□□□ -0.63
UBE2A-201ENST00000346330 RECQLP46063 649 aaPredicted RBP11.13□□□□□ -0.63
UBE2A-201ENST00000346330 JAM2P57087 298 aa11.13□□□□□ -0.63
UBE2A-201ENST00000346330 POLR2FP61218 127 aaKnown RBP11.13□□□□□ -0.63
UBE2A-201ENST00000346330 RPS21P63220 83 aaKnown RBP11.13□□□□□ -0.63
UBE2A-201ENST00000346330 CDR2Q01850 454 aa11.13□□□□□ -0.63
UBE2A-201ENST00000346330 KRT31Q15323 416 aa11.13□□□□□ -0.63
UBE2A-201ENST00000346330 CDKN3Q16667 212 aa11.13□□□□□ -0.63
UBE2A-201ENST00000346330 DEFB133Q30KQ1 61 aa11.13□□□□□ -0.63
UBE2A-201ENST00000346330 TBC1D25Q3MII6 688 aa11.13□□□□□ -0.63
UBE2A-201ENST00000346330 CDKAL1Q5VV42 579 aa11.13□□□□□ -0.63
UBE2A-201ENST00000346330 KCTD16Q68DU8 428 aa11.13□□□□□ -0.63
UBE2A-201ENST00000346330 RETSATQ6NUM9 610 aa11.13□□□□□ -0.63
UBE2A-201ENST00000346330 CRTC1Q6UUV9 634 aa11.13□□□□□ -0.63
UBE2A-201ENST00000346330 KYAT3Q6YP21 454 aaKnown RBP11.13□□□□□ -0.63
UBE2A-201ENST00000346330 ZNF783Q6ZMS7 281 aa11.13□□□□□ -0.63
UBE2A-201ENST00000346330 FAM114A1Q8IWE2 563 aa11.13□□□□□ -0.63
UBE2A-201ENST00000346330 SPACA3Q8IXA5 215 aa11.13□□□□□ -0.63
UBE2A-201ENST00000346330 RYBPQ8N488 228 aaPredicted RBP11.13□□□□□ -0.63
UBE2A-201ENST00000346330 BAP1Q92560 729 aa11.13□□□□□ -0.63
UBE2A-201ENST00000346330 PPP1R16AQ96I34 528 aa11.13□□□□□ -0.63
UBE2A-201ENST00000346330 FCRL3Q96P31 734 aaPredicted RBP11.13□□□□□ -0.63
UBE2A-201ENST00000346330 MBNL1Q9NR56 388 aaKnown RBP11.13□□□□□ -0.63
UBE2A-201ENST00000346330 NLGN3Q9NZ94 848 aa11.13□□□□□ -0.63
UBE2A-201ENST00000346330 SIK3Q9Y2K2 1263 aa11.13□□□□□ -0.63
UBE2A-201ENST00000346330 PAXBP1Q9Y5B6 917 aa11.13□□□□□ -0.63
UBE2A-201ENST00000346330 BSNQ9UPA5 3926 aa11.13□□□□□ -0.63
UBE2A-201ENST00000346330 MYLKQ15746 1914 aa11.12□□□□□ -0.63
UBE2A-201ENST00000346330 AREL1O15033 823 aa11.12□□□□□ -0.63
UBE2A-201ENST00000346330 INSIG1O15503 277 aa11.12□□□□□ -0.63
UBE2A-201ENST00000346330 AP1G1O43747 822 aa11.12□□□□□ -0.63
UBE2A-201ENST00000346330 CSO75390 466 aaKnown RBP11.12□□□□□ -0.63
UBE2A-201ENST00000346330 PLEKP08567 350 aaPredicted RBP11.12□□□□□ -0.63
UBE2A-201ENST00000346330 UNGP13051 313 aaPredicted RBP11.12□□□□□ -0.63
UBE2A-201ENST00000346330 RHOQP17081 205 aa11.12□□□□□ -0.63
UBE2A-201ENST00000346330 IGFALSP35858 605 aa11.12□□□□□ -0.63
UBE2A-201ENST00000346330 PFN3P60673 137 aa11.12□□□□□ -0.63
UBE2A-201ENST00000346330 C1orf61Q13536 156 aa11.12□□□□□ -0.63
UBE2A-201ENST00000346330 PDE1CQ14123 709 aaPredicted RBP11.12□□□□□ -0.63
UBE2A-201ENST00000346330 TCEA2Q15560 299 aa11.12□□□□□ -0.63
UBE2A-201ENST00000346330 PERM1Q5SV97 790 aa11.12□□□□□ -0.63
UBE2A-201ENST00000346330 SMYD5Q6GMV2 418 aa11.12□□□□□ -0.63
UBE2A-201ENST00000346330 KIAA1161Q6NSJ0 714 aa11.12□□□□□ -0.63
UBE2A-201ENST00000346330 ARCQ7LC44 396 aa11.12□□□□□ -0.63
UBE2A-201ENST00000346330 PARGQ86W56 976 aa11.12□□□□□ -0.63
UBE2A-201ENST00000346330 CACTIN-AS1Q8N1I8 211 aa11.12□□□□□ -0.63
UBE2A-201ENST00000346330 IFI44Q8TCB0 444 aa11.12□□□□□ -0.63
UBE2A-201ENST00000346330 FAM172AQ8WUF8 416 aa11.12□□□□□ -0.63
UBE2A-201ENST00000346330 CENPIQ92674 756 aaPredicted RBP11.12□□□□□ -0.63
UBE2A-201ENST00000346330 FGF11Q92914 225 aa11.12□□□□□ -0.63
UBE2A-201ENST00000346330 FUBP1Q96AE4 644 aaKnown RBP11.12□□□□□ -0.63
UBE2A-201ENST00000346330 CENPTQ96BT3 561 aa11.12□□□□□ -0.63
UBE2A-201ENST00000346330 HIC2Q96JB3 615 aa11.12□□□□□ -0.63
UBE2A-201ENST00000346330 FEM1CQ96JP0 617 aa11.12□□□□□ -0.63
UBE2A-201ENST00000346330 KLHL32Q96NJ5 620 aa11.12□□□□□ -0.63
UBE2A-201ENST00000346330 NUP62CLQ9H1M0 184 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms