RNA–Protein interactions for RNA: ENST00000344140.5

CACNB1-201, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene CACNB1, Length 1,889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-201ENST00000344140 TMEM135Q86UB9 458 aa22.33■■□□□ 1.17
CACNB1-201ENST00000344140 LRRC6Q86X45 466 aa22.33■■□□□ 1.17
CACNB1-201ENST00000344140 CELF5Q8N6W0 485 aaKnown RBP22.33■■□□□ 1.17
CACNB1-201ENST00000344140 ZNF557Q8N988 423 aaPredicted RBP22.33■■□□□ 1.17
CACNB1-201ENST00000344140 WFDC5Q8TCV5 224 aa22.33■■□□□ 1.17
CACNB1-201ENST00000344140 TTC17Q96AE7 1141 aa22.33■■□□□ 1.17
CACNB1-201ENST00000344140 TRANK1O15050 2925 aa22.33■■□□□ 1.16
CACNB1-201ENST00000344140 SOX1O00570 391 aaPredicted RBP22.32■■□□□ 1.16
CACNB1-201ENST00000344140 MUSKO15146 869 aa22.32■■□□□ 1.16
CACNB1-201ENST00000344140 USP1O94782 785 aa22.32■■□□□ 1.16
CACNB1-201ENST00000344140 C1QAP02745 245 aa22.32■■□□□ 1.16
CACNB1-201ENST00000344140 NUMBP49757 651 aa22.32■■□□□ 1.16
CACNB1-201ENST00000344140 SLC12A1Q13621 1099 aa22.32■■□□□ 1.16
CACNB1-201ENST00000344140 FRG1Q14331 258 aaKnown RBP22.32■■□□□ 1.16
CACNB1-201ENST00000344140 CBX2Q14781 532 aaPredicted RBP22.32■■□□□ 1.16
CACNB1-201ENST00000344140 TMED2Q15363 201 aa22.32■■□□□ 1.16
CACNB1-201ENST00000344140 ZNF449Q6P9G9 518 aa22.32■■□□□ 1.16
CACNB1-201ENST00000344140 POTEHQ6S545 545 aa22.32■■□□□ 1.16
CACNB1-201ENST00000344140 SLC44A1Q8WWI5 657 aa22.32■■□□□ 1.16
CACNB1-201ENST00000344140 ACDQ96AP0 544 aa22.32■■□□□ 1.16
CACNB1-201ENST00000344140 TRIM56Q9BRZ2 755 aaKnown RBP22.32■■□□□ 1.16
CACNB1-201ENST00000344140 NSUN3Q9H649 340 aaKnown RBP22.32■■□□□ 1.16
CACNB1-201ENST00000344140 IGFLR1Q9H665 355 aa22.32■■□□□ 1.16
CACNB1-201ENST00000344140 PLK2Q9NYY3 685 aa22.32■■□□□ 1.16
CACNB1-201ENST00000344140 SOX13Q9UN79 622 aa22.32■■□□□ 1.16
CACNB1-201ENST00000344140 RPS6KL1Q9Y6S9 549 aa22.32■■□□□ 1.16
CACNB1-201ENST00000344140 FAM159BA6NKW6 160 aa22.32■■□□□ 1.16
CACNB1-201ENST00000344140 ATP9BO43861 1147 aa22.32■■□□□ 1.16
CACNB1-201ENST00000344140 SNAP91O60641 907 aa22.32■■□□□ 1.16
CACNB1-201ENST00000344140 PENKP01210 267 aaPredicted RBP22.32■■□□□ 1.16
CACNB1-201ENST00000344140 INHBAP08476 426 aa22.32■■□□□ 1.16
CACNB1-201ENST00000344140 SERPINF2P08697 491 aa22.32■■□□□ 1.16
CACNB1-201ENST00000344140 TPH1P17752 444 aa22.32■■□□□ 1.16
CACNB1-201ENST00000344140 PCSK7Q16549 785 aa22.32■■□□□ 1.16
CACNB1-201ENST00000344140 RETSATQ6NUM9 610 aa22.32■■□□□ 1.16
CACNB1-201ENST00000344140 CYP4X1Q8N118 509 aa22.32■■□□□ 1.16
CACNB1-201ENST00000344140 PTCD2Q8WV60 388 aaKnown RBP22.32■■□□□ 1.16
CACNB1-201ENST00000344140 VPS51Q9UID3 782 aa22.32■■□□□ 1.16
CACNB1-201ENST00000344140 ACTL7BQ9Y614 415 aa22.32■■□□□ 1.16
CACNB1-201ENST00000344140 EPOP01588 193 aa22.31■■□□□ 1.16
CACNB1-201ENST00000344140 PLK1P53350 603 aa22.31■■□□□ 1.16
CACNB1-201ENST00000344140 CYTH1Q15438 398 aa22.31■■□□□ 1.16
CACNB1-201ENST00000344140 PCID2Q5JVF3 399 aa22.31■■□□□ 1.16
CACNB1-201ENST00000344140 RARS2Q5T160 578 aaKnown RBP22.31■■□□□ 1.16
CACNB1-201ENST00000344140 EXOC3L1Q86VI1 746 aa22.31■■□□□ 1.16
CACNB1-201ENST00000344140 SLC26A11Q86WA9 606 aa22.31■■□□□ 1.16
CACNB1-201ENST00000344140 CTAGE3PQ8IX95 158 aa22.31■■□□□ 1.16
CACNB1-201ENST00000344140 DCAKDQ8WVC6 231 aa22.31■■□□□ 1.16
CACNB1-201ENST00000344140 CDKL2Q92772 493 aa22.31■■□□□ 1.16
CACNB1-201ENST00000344140 IRF7Q92985 503 aa22.31■■□□□ 1.16
CACNB1-201ENST00000344140 MRRFQ96E11 262 aaKnown RBP22.31■■□□□ 1.16
CACNB1-201ENST00000344140 LRCH3Q96II8 777 aa22.31■■□□□ 1.16
CACNB1-201ENST00000344140 KIFC1Q9BW19 673 aa22.31■■□□□ 1.16
CACNB1-201ENST00000344140 TTYH1Q9H313 450 aaPredicted RBP22.31■■□□□ 1.16
CACNB1-201ENST00000344140 CNOT10Q9H9A5 744 aaKnown RBP22.31■■□□□ 1.16
CACNB1-201ENST00000344140 SENP1Q9P0U3 644 aa22.31■■□□□ 1.16
CACNB1-201ENST00000344140 ACTL7AQ9Y615 435 aa22.31■■□□□ 1.16
CACNB1-201ENST00000344140 CXorf51AA0A1B0GTR3 108 aa22.3■■□□□ 1.16
CACNB1-201ENST00000344140 A6NNZ2 444 aa22.3■■□□□ 1.16
CACNB1-201ENST00000344140 TMCC1O94876 653 aa22.3■■□□□ 1.16
CACNB1-201ENST00000344140 FSHRP23945 695 aa22.3■■□□□ 1.16
CACNB1-201ENST00000344140 GABPB1Q06547 395 aaPredicted RBP22.3■■□□□ 1.16
CACNB1-201ENST00000344140 LMAN2Q12907 356 aa22.3■■□□□ 1.16
CACNB1-201ENST00000344140 TUBB8Q3ZCM7 444 aa22.3■■□□□ 1.16
CACNB1-201ENST00000344140 TRMT10BQ6PF06 316 aaKnown RBP22.3■■□□□ 1.16
CACNB1-201ENST00000344140 GPR149Q86SP6 731 aa22.3■■□□□ 1.16
CACNB1-201ENST00000344140 TMEM25Q86YD3 366 aa22.3■■□□□ 1.16
CACNB1-201ENST00000344140 EFHBQ8N7U6 833 aa22.3■■□□□ 1.16
CACNB1-201ENST00000344140 FEM1CQ96JP0 617 aa22.3■■□□□ 1.16
CACNB1-201ENST00000344140 SPHK2Q9NRA0 654 aa22.3■■□□□ 1.16
CACNB1-201ENST00000344140 ZNF180Q9UJW8 692 aa22.3■■□□□ 1.16
CACNB1-201ENST00000344140 LOC285095A0A1B0GVY8 99 aa22.3■■□□□ 1.16
CACNB1-201ENST00000344140 CD160O95971 181 aa22.3■■□□□ 1.16
CACNB1-201ENST00000344140 CR2P20023 1033 aa22.3■■□□□ 1.16
CACNB1-201ENST00000344140 NAB1Q13506 487 aa22.3■■□□□ 1.16
CACNB1-201ENST00000344140 ANKRD20A4Q4UJ75 823 aa22.3■■□□□ 1.16
CACNB1-201ENST00000344140 METTL3Q86U44 580 aaKnown RBP22.3■■□□□ 1.16
CACNB1-201ENST00000344140 CNPY4Q8N129 248 aa22.3■■□□□ 1.16
CACNB1-201ENST00000344140 PPM1NQ8N819 430 aa22.3■■□□□ 1.16
CACNB1-201ENST00000344140 SERBP1Q8NC51 408 aaKnown RBP eCLIP22.3■■□□□ 1.16
CACNB1-201ENST00000344140 PPHLN1Q8NEY8 458 aaKnown RBP22.3■■□□□ 1.16
CACNB1-201ENST00000344140 MRM3Q9HC36 420 aaKnown RBP22.3■■□□□ 1.16
CACNB1-201ENST00000344140 FAM169AQ9Y6X4 670 aa22.3■■□□□ 1.16
CACNB1-201ENST00000344140 INSIG1O15503 277 aa22.29■■□□□ 1.16
CACNB1-201ENST00000344140 PIAS1O75925 651 aa22.29■■□□□ 1.16
CACNB1-201ENST00000344140 KRT15P19012 456 aa22.29■■□□□ 1.16
CACNB1-201ENST00000344140 ATP1A2P50993 1020 aa22.29■■□□□ 1.16
CACNB1-201ENST00000344140 NSUN2Q08J23 767 aaKnown RBP eCLIP22.29■■□□□ 1.16
CACNB1-201ENST00000344140 IHHQ14623 411 aa22.29■■□□□ 1.16
CACNB1-201ENST00000344140 SLC1A5Q15758 541 aa22.29■■□□□ 1.16
CACNB1-201ENST00000344140 PLEKHG6Q3KR16 790 aa22.29■■□□□ 1.16
CACNB1-201ENST00000344140 PKN3Q6P5Z2 889 aa22.29■■□□□ 1.16
CACNB1-201ENST00000344140 LINGO4Q6UY18 593 aa22.29■■□□□ 1.16
CACNB1-201ENST00000344140 KDELC2Q7Z4H8 507 aa22.29■■□□□ 1.16
CACNB1-201ENST00000344140 NPAS3Q8IXF0 933 aa22.29■■□□□ 1.16
CACNB1-201ENST00000344140 APCDD1Q8J025 514 aa22.29■■□□□ 1.16
CACNB1-201ENST00000344140 ZNF669Q96BR6 464 aaPredicted RBP22.29■■□□□ 1.16
CACNB1-201ENST00000344140 IFT43Q96FT9 208 aa22.29■■□□□ 1.16
CACNB1-201ENST00000344140 NUDCD1Q96RS6 583 aa22.29■■□□□ 1.16
CACNB1-201ENST00000344140 BBS2Q9BXC9 721 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms