RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 NDNQ99608 321 aa15.08■□□□□ 0
VIPAS39-202ENST00000343765 NT5MQ9NPB1 228 aa15.08■□□□□ 0
VIPAS39-202ENST00000343765 NSMCE4AQ9NXX6 385 aa15.08■□□□□ 0
VIPAS39-202ENST00000343765 ACOT9Q9Y305 439 aa15.08■□□□□ 0
VIPAS39-202ENST00000343765 MAP3K7O43318 606 aa15.07■□□□□ 0
VIPAS39-202ENST00000343765 TBX18O95935 607 aa15.07■□□□□ 0
VIPAS39-202ENST00000343765 HMBSP08397 361 aa15.07■□□□□ 0
VIPAS39-202ENST00000343765 ARCN1P48444 511 aaKnown RBP15.07■□□□□ 0
VIPAS39-202ENST00000343765 ARPP19P56211 112 aa15.07■□□□□ 0
VIPAS39-202ENST00000343765 WNT3AP56704 352 aa15.07■□□□□ 0
VIPAS39-202ENST00000343765 USP46P62068 366 aa15.07■□□□□ 0
VIPAS39-202ENST00000343765 EML3Q32P44 896 aa15.07■□□□□ 0
VIPAS39-202ENST00000343765 TCHHL1Q5QJ38 904 aaPredicted RBP15.07■□□□□ 0
VIPAS39-202ENST00000343765 ARTNQ5T4W7 220 aa15.07■□□□□ 0
VIPAS39-202ENST00000343765 LRRC8EQ6NSJ5 796 aa15.07■□□□□ 0
VIPAS39-202ENST00000343765 RNF135Q8IUD6 432 aa15.07■□□□□ 0
VIPAS39-202ENST00000343765 TMEM151AQ8N4L1 468 aa15.07■□□□□ 0
VIPAS39-202ENST00000343765 LZTR1Q8N653 840 aa15.07■□□□□ 0
VIPAS39-202ENST00000343765 MARK4Q96L34 752 aa15.07■□□□□ 0
VIPAS39-202ENST00000343765 ANGPTL2Q9UKU9 493 aa15.07■□□□□ 0
VIPAS39-202ENST00000343765 J3KR12 359 aa15.07■□□□□ 0
VIPAS39-202ENST00000343765 CCL22O00626 93 aa15.07■□□□□ 0
VIPAS39-202ENST00000343765 COX4I1P13073 169 aa15.07■□□□□ 0
VIPAS39-202ENST00000343765 STMN1P16949 149 aa15.07■□□□□ 0
VIPAS39-202ENST00000343765 ITGAXP20702 1163 aa15.07■□□□□ 0
VIPAS39-202ENST00000343765 HOXC13P31276 330 aa15.07■□□□□ 0
VIPAS39-202ENST00000343765 ADRA1AP35348 466 aa15.07■□□□□ 0
VIPAS39-202ENST00000343765 FCGRTP55899 365 aa15.07■□□□□ 0
VIPAS39-202ENST00000343765 RAB10P61026 200 aa15.07■□□□□ 0
VIPAS39-202ENST00000343765 ZNF33AQ06730 810 aa15.07■□□□□ 0
VIPAS39-202ENST00000343765 EFEMP1Q12805 493 aa15.07■□□□□ 0
VIPAS39-202ENST00000343765 DLG1Q12959 904 aa15.07■□□□□ 0
VIPAS39-202ENST00000343765 KLF10Q13118 480 aa15.07■□□□□ 0
VIPAS39-202ENST00000343765 PDCD2Q16342 344 aaPredicted RBP15.07■□□□□ 0
VIPAS39-202ENST00000343765 NXNQ6DKJ4 435 aa15.07■□□□□ 0
VIPAS39-202ENST00000343765 TMC7Q7Z402 723 aa15.07■□□□□ 0
VIPAS39-202ENST00000343765 MIB1Q86YT6 1006 aa15.07■□□□□ 0
VIPAS39-202ENST00000343765 MYLK4Q86YV6 388 aaPredicted RBP15.07■□□□□ 0
VIPAS39-202ENST00000343765 UCMAQ8WVF2 138 aa15.07■□□□□ 0
VIPAS39-202ENST00000343765 B3GALT6Q96L58 329 aa15.07■□□□□ 0
VIPAS39-202ENST00000343765 GMIPQ9P107 970 aa15.07■□□□□ 0
VIPAS39-202ENST00000343765 ZNF212Q9UDV6 495 aa15.07■□□□□ 0
VIPAS39-202ENST00000343765 ZDHHC2Q9UIJ5 367 aa15.07■□□□□ 0
VIPAS39-202ENST00000343765 ANKRD6Q9Y2G4 727 aa15.07■□□□□ 0
VIPAS39-202ENST00000343765 CNTN5O94779 1100 aa15.07■□□□□ 0
VIPAS39-202ENST00000343765 JUNP05412 331 aaKnown RBP15.07■□□□□ 0
VIPAS39-202ENST00000343765 MYL4P12829 197 aa15.07■□□□□ 0
VIPAS39-202ENST00000343765 TAS2R39P59534 338 aa15.07■□□□□ 0
VIPAS39-202ENST00000343765 AP2B1P63010 937 aa15.07■□□□□ 0
VIPAS39-202ENST00000343765 UGP2Q16851 508 aa15.07■□□□□ 0
VIPAS39-202ENST00000343765 FSCBQ5H9T9 825 aa15.07■□□□□ 0
VIPAS39-202ENST00000343765 PPM1LQ5SGD2 360 aa15.07■□□□□ 0
VIPAS39-202ENST00000343765 SEL1L3Q68CR1 1132 aa15.07■□□□□ 0
VIPAS39-202ENST00000343765 GLB1LQ6UWU2 654 aa15.07■□□□□ 0
VIPAS39-202ENST00000343765 CIR1Q86X95 450 aaPredicted RBP15.07■□□□□ 0
VIPAS39-202ENST00000343765 HMCESQ96FZ2 354 aa15.07■□□□□ 0
VIPAS39-202ENST00000343765 UROC1Q96N76 676 aa15.07■□□□□ 0
VIPAS39-202ENST00000343765 SERPINB11Q96P15 392 aa15.07■□□□□ 0
VIPAS39-202ENST00000343765 ENTPD7Q9NQZ7 604 aa15.07■□□□□ 0
VIPAS39-202ENST00000343765 NDE1Q9NXR1 346 aa15.07■□□□□ 0
VIPAS39-202ENST00000343765 DNAJB4Q9UDY4 337 aa15.07■□□□□ 0
VIPAS39-202ENST00000343765 MID2Q9UJV3 735 aa15.07■□□□□ 0
VIPAS39-202ENST00000343765 PCDHB8Q9UN66 801 aa15.07■□□□□ 0
VIPAS39-202ENST00000343765 KCNU1A8MYU2 1149 aa15.06■□□□□ 0
VIPAS39-202ENST00000343765 TMEM233B4DJY2 109 aa15.06■□□□□ 0
VIPAS39-202ENST00000343765 DLX3O60479 287 aa15.06■□□□□ 0
VIPAS39-202ENST00000343765 SMNDC1O75940 238 aaKnown RBP eCLIP15.06■□□□□ 0
VIPAS39-202ENST00000343765 APOA4P06727 396 aa15.06■□□□□ 0
VIPAS39-202ENST00000343765 HADHAP40939 763 aa15.06■□□□□ 0
VIPAS39-202ENST00000343765 CD86P42081 329 aa15.06■□□□□ 0
VIPAS39-202ENST00000343765 PSMD5Q16401 504 aa15.06■□□□□ 0
VIPAS39-202ENST00000343765 ALFQ53S48 1182 aa15.06■□□□□ 0
VIPAS39-202ENST00000343765 ZNF789Q5FWF6 425 aa15.06■□□□□ 0
VIPAS39-202ENST00000343765 RBM20Q5T481 1227 aaKnown RBP15.06■□□□□ 0
VIPAS39-202ENST00000343765 TMEM198Q66K66 360 aa15.06■□□□□ 0
VIPAS39-202ENST00000343765 TIGD7Q6NT04 549 aaPredicted RBP15.06■□□□□ 0
VIPAS39-202ENST00000343765 CNSTQ6PJW8 725 aa15.06■□□□□ 0
VIPAS39-202ENST00000343765 POTEHQ6S545 545 aa15.06■□□□□ 0
VIPAS39-202ENST00000343765 BEND5Q7L4P6 421 aa15.06■□□□□ 0
VIPAS39-202ENST00000343765 ZNF598Q86UK7 904 aaKnown RBP15.06■□□□□ 0
VIPAS39-202ENST00000343765 HPS6Q86YV9 775 aa15.06■□□□□ 0
VIPAS39-202ENST00000343765 SLC26A7Q8TE54 656 aa15.06■□□□□ 0
VIPAS39-202ENST00000343765 LENG8Q96PV6 779 aaPredicted RBP15.06■□□□□ 0
VIPAS39-202ENST00000343765 DRC3Q9H069 523 aa15.06■□□□□ 0
VIPAS39-202ENST00000343765 NOL6Q9H6R4 1146 aaKnown RBP15.06■□□□□ 0
VIPAS39-202ENST00000343765 CDH22Q9UJ99 828 aa15.06■□□□□ 0
VIPAS39-202ENST00000343765 FIS1Q9Y3D6 152 aa15.06■□□□□ 0
VIPAS39-202ENST00000343765 RAP2CQ9Y3L5 183 aa15.06■□□□□ 0
VIPAS39-202ENST00000343765 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.06■□□□□ 0
VIPAS39-202ENST00000343765 NEMP2A6NFY4 417 aa15.06■□□□□ 0
VIPAS39-202ENST00000343765 AIM2O14862 343 aa15.06■□□□□ 0
VIPAS39-202ENST00000343765 H2AFYO75367 372 aaKnown RBP15.06■□□□□ 0
VIPAS39-202ENST00000343765 HAPLN1P10915 354 aaPredicted RBP15.06■□□□□ 0
VIPAS39-202ENST00000343765 PRKAR2AP13861 404 aaKnown RBP15.06■□□□□ 0
VIPAS39-202ENST00000343765 TYMPP19971 482 aa15.06■□□□□ 0
VIPAS39-202ENST00000343765 PAX7P23759 505 aa15.06■□□□□ 0
VIPAS39-202ENST00000343765 GCKP35557 465 aa15.06■□□□□ 0
VIPAS39-202ENST00000343765 ETFBP38117 255 aa15.06■□□□□ 0
VIPAS39-202ENST00000343765 RPL14P50914 215 aaKnown RBP15.06■□□□□ 0
VIPAS39-202ENST00000343765 SLC12A2P55011 1212 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms