RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 PDPK2PQ6A1A2 396 aa18.85■□□□□ 0.61
HOXA9-201ENST00000343483 FSTL4Q6MZW2 842 aa18.85■□□□□ 0.61
HOXA9-201ENST00000343483 POTEHQ6S545 545 aa18.85■□□□□ 0.61
HOXA9-201ENST00000343483 RANBP10Q6VN20 620 aa18.85■□□□□ 0.61
HOXA9-201ENST00000343483 CLNKQ7Z7G1 428 aa18.85■□□□□ 0.61
HOXA9-201ENST00000343483 CMC1Q7Z7K0 106 aa18.85■□□□□ 0.61
HOXA9-201ENST00000343483 DCLK2Q8N568 766 aa18.85■□□□□ 0.61
HOXA9-201ENST00000343483 INPP5DQ92835 1189 aa18.85■□□□□ 0.61
HOXA9-201ENST00000343483 TRIM43Q96BQ3 446 aaPredicted RBP18.85■□□□□ 0.61
HOXA9-201ENST00000343483 KCNK13Q9HB14 408 aa18.85■□□□□ 0.61
HOXA9-201ENST00000343483 GKN1Q9NS71 199 aa18.85■□□□□ 0.61
HOXA9-201ENST00000343483 HEY2Q9UBP5 337 aa18.85■□□□□ 0.61
HOXA9-201ENST00000343483 ZFP37Q9Y6Q3 630 aaPredicted RBP18.85■□□□□ 0.61
HOXA9-201ENST00000343483 E2F8A0AVK6 867 aa18.84■□□□□ 0.61
HOXA9-201ENST00000343483 IRF1P10914 325 aa18.84■□□□□ 0.61
HOXA9-201ENST00000343483 RASSF2P50749 326 aa18.84■□□□□ 0.61
HOXA9-201ENST00000343483 YBEYP58557 167 aaPredicted RBP18.84■□□□□ 0.61
HOXA9-201ENST00000343483 TMPRSS15P98073 1019 aa18.84■□□□□ 0.61
HOXA9-201ENST00000343483 TWF1Q12792 350 aa18.84■□□□□ 0.61
HOXA9-201ENST00000343483 ATG16L1Q676U5 607 aa18.84■□□□□ 0.61
HOXA9-201ENST00000343483 C16orf46Q6P387 395 aa18.84■□□□□ 0.61
HOXA9-201ENST00000343483 KLHDC10Q6PID8 442 aa18.84■□□□□ 0.61
HOXA9-201ENST00000343483 KDELC1Q6UW63 502 aa18.84■□□□□ 0.61
HOXA9-201ENST00000343483 E2F7Q96AV8 911 aa18.84■□□□□ 0.61
HOXA9-201ENST00000343483 MYRFLQ96LU7 910 aa18.84■□□□□ 0.61
HOXA9-201ENST00000343483 YME1L1Q96TA2 773 aa18.84■□□□□ 0.61
HOXA9-201ENST00000343483 SNX15Q9NRS6 342 aa18.84■□□□□ 0.61
HOXA9-201ENST00000343483 TCAF1Q9Y4C2 921 aa18.84■□□□□ 0.61
HOXA9-201ENST00000343483 NUMBLQ9Y6R0 609 aa18.84■□□□□ 0.61
HOXA9-201ENST00000343483 C2orf78A6NCI8 922 aa18.83■□□□□ 0.61
HOXA9-201ENST00000343483 GLRA3O75311 464 aa18.83■□□□□ 0.61
HOXA9-201ENST00000343483 DLDP09622 509 aaKnown RBP18.83■□□□□ 0.61
HOXA9-201ENST00000343483 RAG1P15918 1043 aa18.83■□□□□ 0.61
HOXA9-201ENST00000343483 CORO1AP31146 461 aaKnown RBP18.83■□□□□ 0.61
HOXA9-201ENST00000343483 ELF1P32519 619 aa18.83■□□□□ 0.61
HOXA9-201ENST00000343483 LBRQ14739 615 aaKnown RBP18.83■□□□□ 0.61
HOXA9-201ENST00000343483 CHI3L2Q15782 390 aa18.83■□□□□ 0.61
HOXA9-201ENST00000343483 N4BP2L1Q5TBK1 243 aaPredicted RBP18.83■□□□□ 0.61
HOXA9-201ENST00000343483 KYAT3Q6YP21 454 aaKnown RBP18.83■□□□□ 0.61
HOXA9-201ENST00000343483 NUDCD3Q8IVD9 361 aa18.83■□□□□ 0.61
HOXA9-201ENST00000343483 CMTR2Q8IYT2 770 aaKnown RBP18.83■□□□□ 0.61
HOXA9-201ENST00000343483 TEX26Q8N6G2 289 aa18.83■□□□□ 0.61
HOXA9-201ENST00000343483 UTP4Q969X6 686 aaKnown RBP18.83■□□□□ 0.61
HOXA9-201ENST00000343483 SAR1AQ9NR31 198 aa18.83■□□□□ 0.61
HOXA9-201ENST00000343483 A0A0D9SEW6 157 aa18.83■□□□□ 0.6
HOXA9-201ENST00000343483 STC2O76061 302 aa18.83■□□□□ 0.6
HOXA9-201ENST00000343483 VAPBO95292 243 aa18.83■□□□□ 0.6
HOXA9-201ENST00000343483 KLKB1P03952 638 aa18.83■□□□□ 0.6
HOXA9-201ENST00000343483 CA8P35219 290 aa18.83■□□□□ 0.6
HOXA9-201ENST00000343483 SERPINB8P50452 374 aa18.83■□□□□ 0.6
HOXA9-201ENST00000343483 RPS24P62847 133 aaKnown RBP18.83■□□□□ 0.6
HOXA9-201ENST00000343483 BST1Q10588 318 aa18.83■□□□□ 0.6
HOXA9-201ENST00000343483 RAB33AQ14088 237 aa18.83■□□□□ 0.6
HOXA9-201ENST00000343483 E2F5Q15329 346 aa18.83■□□□□ 0.6
HOXA9-201ENST00000343483 RABGAP1LQ5R372 815 aa18.83■□□□□ 0.6
HOXA9-201ENST00000343483 ESRP1Q6NXG1 681 aaKnown RBP18.83■□□□□ 0.6
HOXA9-201ENST00000343483 CCDC91Q7Z6B0 441 aa18.83■□□□□ 0.6
HOXA9-201ENST00000343483 DDX53Q86TM3 631 aaKnown RBP18.83■□□□□ 0.6
HOXA9-201ENST00000343483 PGBD5Q8N414 524 aa18.83■□□□□ 0.6
HOXA9-201ENST00000343483 PLD4Q96BZ4 506 aa18.83■□□□□ 0.6
HOXA9-201ENST00000343483 SLC7A6OSQ96CW6 309 aaPredicted RBP18.83■□□□□ 0.6
HOXA9-201ENST00000343483 RNF38Q9H0F5 515 aa18.83■□□□□ 0.6
HOXA9-201ENST00000343483 VPS45Q9NRW7 570 aa18.83■□□□□ 0.6
HOXA9-201ENST00000343483 SIRPGQ9P1W8 387 aa18.83■□□□□ 0.6
HOXA9-201ENST00000343483 SLC2A6Q9UGQ3 507 aa18.83■□□□□ 0.6
HOXA9-201ENST00000343483 DCDC2Q9UHG0 476 aa18.83■□□□□ 0.6
HOXA9-201ENST00000343483 PRAMEF11O60813 436 aa18.82■□□□□ 0.6
HOXA9-201ENST00000343483 HAUS5O94927 633 aa18.82■□□□□ 0.6
HOXA9-201ENST00000343483 MMP2P08253 660 aa18.82■□□□□ 0.6
HOXA9-201ENST00000343483 GMPRP36959 345 aa18.82■□□□□ 0.6
HOXA9-201ENST00000343483 ZBTB16Q05516 673 aa18.82■□□□□ 0.6
HOXA9-201ENST00000343483 CTC1Q2NKJ3 1217 aa18.82■□□□□ 0.6
HOXA9-201ENST00000343483 OTOP2Q7RTS6 562 aa18.82■□□□□ 0.6
HOXA9-201ENST00000343483 CCDC117Q8IWD4 279 aaPredicted RBP18.82■□□□□ 0.6
HOXA9-201ENST00000343483 PTCD2Q8WV60 388 aaKnown RBP18.82■□□□□ 0.6
HOXA9-201ENST00000343483 TRMT2BQ96GJ1 504 aaKnown RBP18.82■□□□□ 0.6
HOXA9-201ENST00000343483 C7orf26Q96N11 449 aa18.82■□□□□ 0.6
HOXA9-201ENST00000343483 CAB39LQ9H9S4 337 aa18.82■□□□□ 0.6
HOXA9-201ENST00000343483 MRPL17Q9NRX2 175 aaKnown RBP18.82■□□□□ 0.6
HOXA9-201ENST00000343483 DOCK4Q8N1I0 1966 aa18.82■□□□□ 0.6
HOXA9-201ENST00000343483 VGLL3A8MV65 326 aa18.81■□□□□ 0.6
HOXA9-201ENST00000343483 TIMM44O43615 452 aa18.81■□□□□ 0.6
HOXA9-201ENST00000343483 BPGMP07738 259 aa18.81■□□□□ 0.6
HOXA9-201ENST00000343483 MYL2P10916 166 aa18.81■□□□□ 0.6
HOXA9-201ENST00000343483 SERPINB3P29508 390 aa18.81■□□□□ 0.6
HOXA9-201ENST00000343483 CSE1LP55060 971 aaKnown RBP18.81■□□□□ 0.6
HOXA9-201ENST00000343483 ZNF235Q14590 738 aa18.81■□□□□ 0.6
HOXA9-201ENST00000343483 C5orf22Q49AR2 442 aa18.81■□□□□ 0.6
HOXA9-201ENST00000343483 TMCO4Q5TGY1 634 aa18.81■□□□□ 0.6
HOXA9-201ENST00000343483 IL31Q6EBC2 164 aa18.81■□□□□ 0.6
HOXA9-201ENST00000343483 DNAJB7Q7Z6W7 309 aaPredicted RBP18.81■□□□□ 0.6
HOXA9-201ENST00000343483 AGAP11Q8TF27 550 aa18.81■□□□□ 0.6
HOXA9-201ENST00000343483 VPS39Q96JC1 886 aa18.81■□□□□ 0.6
HOXA9-201ENST00000343483 PRICKLE1Q96MT3 831 aaPredicted RBP18.81■□□□□ 0.6
HOXA9-201ENST00000343483 SMPD4Q9NXE4 827 aa18.81■□□□□ 0.6
HOXA9-201ENST00000343483 NSMCE4AQ9NXX6 385 aa18.81■□□□□ 0.6
HOXA9-201ENST00000343483 EMCNQ9ULC0 261 aa18.81■□□□□ 0.6
HOXA9-201ENST00000343483 BIRC5O15392 142 aa18.81■□□□□ 0.6
HOXA9-201ENST00000343483 GJB3O75712 270 aa18.81■□□□□ 0.6
HOXA9-201ENST00000343483 SPATA31D3P0C874 917 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms