RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 SREBF2Q12772 1141 aa8.15□□□□□ -1.1
UBE4B-202ENST00000343090 SH3D19Q5HYK7 790 aa8.15□□□□□ -1.1
UBE4B-202ENST00000343090 GPR107Q5VW38 600 aa8.15□□□□□ -1.1
UBE4B-202ENST00000343090 PACS1Q6VY07 963 aa8.15□□□□□ -1.1
UBE4B-202ENST00000343090 ENDOVQ8N8Q3 282 aaKnown RBP8.15□□□□□ -1.1
UBE4B-202ENST00000343090 TRPC4APQ8TEL6 797 aa8.15□□□□□ -1.1
UBE4B-202ENST00000343090 YIPF2Q9BWQ6 316 aa8.15□□□□□ -1.1
UBE4B-202ENST00000343090 POLG2Q9UHN1 485 aa8.15□□□□□ -1.1
UBE4B-202ENST00000343090 RAD54BQ9Y620 910 aa8.15□□□□□ -1.1
UBE4B-202ENST00000343090 LTN1O94822 1766 aa8.15□□□□□ -1.1
UBE4B-202ENST00000343090 KANSL1LA0AUZ9 987 aa8.15□□□□□ -1.1
UBE4B-202ENST00000343090 MOXD2PA6NHM9 499 aa8.15□□□□□ -1.1
UBE4B-202ENST00000343090 LRCH4O75427 683 aa8.15□□□□□ -1.1
UBE4B-202ENST00000343090 RFX3P48380 749 aa8.15□□□□□ -1.1
UBE4B-202ENST00000343090 CERCAMQ5T4B2 595 aa8.15□□□□□ -1.1
UBE4B-202ENST00000343090 TTC7BQ86TV6 843 aa8.15□□□□□ -1.1
UBE4B-202ENST00000343090 LZTR1Q8N653 840 aa8.15□□□□□ -1.1
UBE4B-202ENST00000343090 GPR152Q8TDT2 470 aa8.15□□□□□ -1.1
UBE4B-202ENST00000343090 CPT1BQ92523 772 aa8.15□□□□□ -1.1
UBE4B-202ENST00000343090 CIPCQ9C0C6 399 aa8.15□□□□□ -1.1
UBE4B-202ENST00000343090 STARD7Q9NQZ5 370 aa8.15□□□□□ -1.1
UBE4B-202ENST00000343090 ENTPD7Q9NQZ7 604 aa8.15□□□□□ -1.1
UBE4B-202ENST00000343090 COMMD8Q9NX08 183 aa8.15□□□□□ -1.1
UBE4B-202ENST00000343090 NOCTQ9UK39 431 aaKnown RBP8.15□□□□□ -1.1
UBE4B-202ENST00000343090 BTRCQ9Y297 605 aa8.15□□□□□ -1.1
UBE4B-202ENST00000343090 PTGES3LE9PB15 166 aa8.15□□□□□ -1.11
UBE4B-202ENST00000343090 PSMB9P28065 219 aa8.15□□□□□ -1.11
UBE4B-202ENST00000343090 SLC16A1P53985 500 aa8.15□□□□□ -1.11
UBE4B-202ENST00000343090 ALDH6A1Q02252 535 aaKnown RBP8.15□□□□□ -1.11
UBE4B-202ENST00000343090 GBE1Q04446 702 aa8.15□□□□□ -1.11
UBE4B-202ENST00000343090 STARD3Q14849 445 aa8.15□□□□□ -1.11
UBE4B-202ENST00000343090 IL27RAQ6UWB1 636 aa8.15□□□□□ -1.11
UBE4B-202ENST00000343090 MILR1Q7Z6M3 343 aa8.15□□□□□ -1.11
UBE4B-202ENST00000343090 PTGR2Q8N8N7 351 aaPredicted RBP8.15□□□□□ -1.11
UBE4B-202ENST00000343090 DQX1Q8TE96 717 aaKnown RBP8.15□□□□□ -1.11
UBE4B-202ENST00000343090 P2RY11Q96G91 374 aa8.15□□□□□ -1.11
UBE4B-202ENST00000343090 VAT1Q99536 393 aa8.15□□□□□ -1.11
UBE4B-202ENST00000343090 ACE2Q9BYF1 805 aaPredicted RBP8.15□□□□□ -1.11
UBE4B-202ENST00000343090 BPIFA1Q9NP55 256 aa8.15□□□□□ -1.11
UBE4B-202ENST00000343090 USE1Q9NZ43 259 aa8.15□□□□□ -1.11
UBE4B-202ENST00000343090 TELO2Q9Y4R8 837 aa8.15□□□□□ -1.11
UBE4B-202ENST00000343090 A0A087X1B8 175 aa8.15□□□□□ -1.11
UBE4B-202ENST00000343090 HS6ST1O60243 411 aa8.15□□□□□ -1.11
UBE4B-202ENST00000343090 LZTS3O60299 673 aaPredicted RBP8.15□□□□□ -1.11
UBE4B-202ENST00000343090 EGFRP00533 1210 aa8.15□□□□□ -1.11
UBE4B-202ENST00000343090 LDLRP01130 860 aa8.15□□□□□ -1.11
UBE4B-202ENST00000343090 DDX5P17844 614 aaKnown RBP8.15□□□□□ -1.11
UBE4B-202ENST00000343090 GNAZP19086 355 aa8.15□□□□□ -1.11
UBE4B-202ENST00000343090 GRIA3P42263 894 aa8.15□□□□□ -1.11
UBE4B-202ENST00000343090 CDKN2BP42772 138 aa8.15□□□□□ -1.11
UBE4B-202ENST00000343090 FSTL1Q12841 308 aa8.15□□□□□ -1.11
UBE4B-202ENST00000343090 CCDC142Q17RM4 750 aa8.15□□□□□ -1.11
UBE4B-202ENST00000343090 FAM98BQ52LJ0 330 aaKnown RBP8.15□□□□□ -1.11
UBE4B-202ENST00000343090 PDCD4Q53EL6 469 aaKnown RBP8.15□□□□□ -1.11
UBE4B-202ENST00000343090 C6orf52Q5T4I8 152 aa8.15□□□□□ -1.11
UBE4B-202ENST00000343090 PLPPR4Q7Z2D5 763 aa8.15□□□□□ -1.11
UBE4B-202ENST00000343090 MYLPFQ96A32 169 aa8.15□□□□□ -1.11
UBE4B-202ENST00000343090 RCN3Q96D15 328 aa8.15□□□□□ -1.11
UBE4B-202ENST00000343090 TINF2Q9BSI4 451 aa8.15□□□□□ -1.11
UBE4B-202ENST00000343090 SLC25A23Q9BV35 468 aa8.15□□□□□ -1.11
UBE4B-202ENST00000343090 GRHL1Q9NZI5 618 aa8.15□□□□□ -1.11
UBE4B-202ENST00000343090 H2AFY2Q9P0M6 372 aaPredicted RBP8.15□□□□□ -1.11
UBE4B-202ENST00000343090 MORF4L1Q9UBU8 362 aa8.15□□□□□ -1.11
UBE4B-202ENST00000343090 PHF24Q9UPV7 400 aa8.15□□□□□ -1.11
UBE4B-202ENST00000343090 TRPV2Q9Y5S1 764 aa8.15□□□□□ -1.11
UBE4B-202ENST00000343090 GSNP06396 782 aa8.14□□□□□ -1.11
UBE4B-202ENST00000343090 LTA4HP09960 611 aaKnown RBP8.14□□□□□ -1.11
UBE4B-202ENST00000343090 MYL4P12829 197 aa8.14□□□□□ -1.11
UBE4B-202ENST00000343090 BLVRAP53004 296 aa8.14□□□□□ -1.11
UBE4B-202ENST00000343090 ITGA7Q13683 1181 aa8.14□□□□□ -1.11
UBE4B-202ENST00000343090 NDUFA5Q16718 116 aa8.14□□□□□ -1.11
UBE4B-202ENST00000343090 ASTE1Q2TB18 679 aaPredicted RBP8.14□□□□□ -1.11
UBE4B-202ENST00000343090 TAF2Q6P1X5 1199 aa8.14□□□□□ -1.11
UBE4B-202ENST00000343090 TBC1D19Q8N5T2 526 aa8.14□□□□□ -1.11
UBE4B-202ENST00000343090 OR56A4Q8NGH8 313 aa8.14□□□□□ -1.11
UBE4B-202ENST00000343090 TFAP2BQ92481 460 aa8.14□□□□□ -1.11
UBE4B-202ENST00000343090 EMID1Q96A84 441 aaPredicted RBP8.14□□□□□ -1.11
UBE4B-202ENST00000343090 TPD52L3Q96J77 140 aa8.14□□□□□ -1.11
UBE4B-202ENST00000343090 MAGED4Q96JG8 741 aa8.14□□□□□ -1.11
UBE4B-202ENST00000343090 HSFY1Q96LI6 401 aa8.14□□□□□ -1.11
UBE4B-202ENST00000343090 APOBEC3GQ9HC16 384 aaKnown RBP8.14□□□□□ -1.11
UBE4B-202ENST00000343090 HMG20AQ9NP66 347 aa8.14□□□□□ -1.11
UBE4B-202ENST00000343090 ABCC13Q9NSE7 274 aa8.14□□□□□ -1.11
UBE4B-202ENST00000343090 CATSPERZQ9NTU4 200 aa8.14□□□□□ -1.11
UBE4B-202ENST00000343090 ZDHHC18Q9NUE0 388 aa8.14□□□□□ -1.11
UBE4B-202ENST00000343090 MARCH2Q9P0N8 246 aa8.14□□□□□ -1.11
UBE4B-202ENST00000343090 C6orf203Q9P0P8 240 aaPredicted RBP8.14□□□□□ -1.11
UBE4B-202ENST00000343090 SH3BP4Q9P0V3 963 aa8.14□□□□□ -1.11
UBE4B-202ENST00000343090 XPR1Q9UBH6 696 aa8.14□□□□□ -1.11
UBE4B-202ENST00000343090 LNPEPQ9UIQ6 1025 aa8.14□□□□□ -1.11
UBE4B-202ENST00000343090 SLC25A13Q9UJS0 675 aa8.14□□□□□ -1.11
UBE4B-202ENST00000343090 FAM208AQ9UK61 1670 aaKnown RBP8.14□□□□□ -1.11
UBE4B-202ENST00000343090 IGKV6D-41A0A0C4DH26 115 aa8.14□□□□□ -1.11
UBE4B-202ENST00000343090 ZNF862O60290 1169 aa8.14□□□□□ -1.11
UBE4B-202ENST00000343090 GRIN3BO60391 1043 aa8.14□□□□□ -1.11
UBE4B-202ENST00000343090 PGK1P00558 417 aa8.14□□□□□ -1.11
UBE4B-202ENST00000343090 TFEBP19484 476 aa8.14□□□□□ -1.11
UBE4B-202ENST00000343090 PRKAA2P54646 552 aa8.14□□□□□ -1.11
UBE4B-202ENST00000343090 NOMO1Q15155 1222 aa8.14□□□□□ -1.11
UBE4B-202ENST00000343090 NADK2Q4G0N4 442 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms