RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 NT5MQ9NPB1 228 aa17.8■□□□□ 0.44
SMAD4-201ENST00000342988 PNPLA3Q9NST1 481 aa17.8■□□□□ 0.44
SMAD4-201ENST00000342988 ABCC2Q92887 1545 aa17.8■□□□□ 0.44
SMAD4-201ENST00000342988 HMGCRP04035 888 aa17.8■□□□□ 0.44
SMAD4-201ENST00000342988 FAM196AQ6ZSG2 479 aa17.8■□□□□ 0.44
SMAD4-201ENST00000342988 TMEM192Q8IY95 271 aa17.8■□□□□ 0.44
SMAD4-201ENST00000342988 ZNF563Q8TA94 476 aa17.8■□□□□ 0.44
SMAD4-201ENST00000342988 NELFAQ9H3P2 528 aa17.8■□□□□ 0.44
SMAD4-201ENST00000342988 FBXL21Q9UKT6 434 aa17.8■□□□□ 0.44
SMAD4-201ENST00000342988 SORCS3Q9UPU3 1222 aa17.8■□□□□ 0.44
SMAD4-201ENST00000342988 PCDHB12Q9Y5F1 795 aa17.8■□□□□ 0.44
SMAD4-201ENST00000342988 TFECO14948 347 aaPredicted RBP17.8■□□□□ 0.44
SMAD4-201ENST00000342988 NDUFS2O75306 463 aa17.8■□□□□ 0.44
SMAD4-201ENST00000342988 IRGCQ6NXR0 463 aa17.8■□□□□ 0.44
SMAD4-201ENST00000342988 C17orf75Q9HAS0 396 aa17.8■□□□□ 0.44
SMAD4-201ENST00000342988 DNMT1P26358 1616 aaKnown RBP17.8■□□□□ 0.44
SMAD4-201ENST00000342988 KPNA3O00505 521 aaPredicted RBP17.8■□□□□ 0.44
SMAD4-201ENST00000342988 PPM1BO75688 479 aa17.8■□□□□ 0.44
SMAD4-201ENST00000342988 RGS19P49795 217 aa17.8■□□□□ 0.44
SMAD4-201ENST00000342988 ACAD10Q6JQN1 1059 aa17.8■□□□□ 0.44
SMAD4-201ENST00000342988 COMMD3-BMI1R4GMX3 469 aa17.8■□□□□ 0.44
SMAD4-201ENST00000342988 PBRM1Q86U86 1689 aa17.8■□□□□ 0.44
SMAD4-201ENST00000342988 ORC5O43913 435 aa17.79■□□□□ 0.44
SMAD4-201ENST00000342988 MAGEC1O60732 1142 aa17.79■□□□□ 0.44
SMAD4-201ENST00000342988 URODP06132 367 aa17.79■□□□□ 0.44
SMAD4-201ENST00000342988 SPIBQ01892 262 aa17.79■□□□□ 0.44
SMAD4-201ENST00000342988 NEDD4P46934 1319 aa17.79■□□□□ 0.44
SMAD4-201ENST00000342988 RBAK-RBAKDNI3L0D1 243 aa17.79■□□□□ 0.44
SMAD4-201ENST00000342988 LHX1P48742 406 aa17.79■□□□□ 0.44
SMAD4-201ENST00000342988 MARSP56192 900 aaKnown RBP17.79■□□□□ 0.44
SMAD4-201ENST00000342988 GRM4Q14833 912 aa17.79■□□□□ 0.44
SMAD4-201ENST00000342988 CBWD6Q4V339 395 aa17.79■□□□□ 0.44
SMAD4-201ENST00000342988 HDAC7Q8WUI4 952 aa17.79■□□□□ 0.44
SMAD4-201ENST00000342988 LOC102724428A0A0B4J2F2 783 aa17.79■□□□□ 0.44
SMAD4-201ENST00000342988 KAT7O95251 611 aa17.79■□□□□ 0.44
SMAD4-201ENST00000342988 HSD17B2P37059 387 aa17.79■□□□□ 0.44
SMAD4-201ENST00000342988 SIK1P57059 783 aa17.79■□□□□ 0.44
SMAD4-201ENST00000342988 E2F2Q14209 437 aa17.79■□□□□ 0.44
SMAD4-201ENST00000342988 FAM13CQ8NE31 585 aa17.79■□□□□ 0.44
SMAD4-201ENST00000342988 POC1BQ8TC44 478 aa17.79■□□□□ 0.44
SMAD4-201ENST00000342988 DNAJC11Q9NVH1 559 aa17.79■□□□□ 0.44
SMAD4-201ENST00000342988 CYP2C9P11712 490 aa17.79■□□□□ 0.44
SMAD4-201ENST00000342988 ZNF554Q86TJ5 538 aa17.79■□□□□ 0.44
SMAD4-201ENST00000342988 ZC3H7AQ8IWR0 971 aaKnown RBP17.79■□□□□ 0.44
SMAD4-201ENST00000342988 TRIM36Q9NQ86 728 aa17.79■□□□□ 0.44
SMAD4-201ENST00000342988 CATSPERZQ9NTU4 200 aa17.79■□□□□ 0.44
SMAD4-201ENST00000342988 DPP3Q9NY33 737 aa17.79■□□□□ 0.44
SMAD4-201ENST00000342988 AXIN2Q9Y2T1 843 aa17.79■□□□□ 0.44
SMAD4-201ENST00000342988 PECAM1P16284 738 aaPredicted RBP17.79■□□□□ 0.44
SMAD4-201ENST00000342988 S100PP25815 95 aa17.79■□□□□ 0.44
SMAD4-201ENST00000342988 CDH5P33151 784 aaPredicted RBP17.79■□□□□ 0.44
SMAD4-201ENST00000342988 GPR182O15218 404 aa17.79■□□□□ 0.44
SMAD4-201ENST00000342988 FGFR3P22607 806 aa17.79■□□□□ 0.44
SMAD4-201ENST00000342988 BOP1Q14137 746 aaKnown RBP17.79■□□□□ 0.44
SMAD4-201ENST00000342988 NET1Q7Z628 596 aaPredicted RBP17.79■□□□□ 0.44
SMAD4-201ENST00000342988 KCNMB4Q86W47 210 aa17.79■□□□□ 0.44
SMAD4-201ENST00000342988 PRICKLE1Q96MT3 831 aaPredicted RBP17.79■□□□□ 0.44
SMAD4-201ENST00000342988 PIGBOS1A0A0B4J2F0 54 aa17.79■□□□□ 0.44
SMAD4-201ENST00000342988 TKFCQ3LXA3 575 aa17.79■□□□□ 0.44
SMAD4-201ENST00000342988 SFRP1Q8N474 314 aa17.79■□□□□ 0.44
SMAD4-201ENST00000342988 PARK7Q99497 189 aaKnown RBP17.79■□□□□ 0.44
SMAD4-201ENST00000342988 CLK4Q9HAZ1 481 aaKnown RBP17.79■□□□□ 0.44
SMAD4-201ENST00000342988 ZMYM5Q9UJ78 669 aa17.79■□□□□ 0.44
SMAD4-201ENST00000342988 HSBP1L1C9JCN9 74 aa17.78■□□□□ 0.44
SMAD4-201ENST00000342988 ACSM2AQ08AH3 577 aa17.78■□□□□ 0.44
SMAD4-201ENST00000342988 HNRNPLLQ8WVV9 542 aaKnown RBP17.78■□□□□ 0.44
SMAD4-201ENST00000342988 KLF6Q99612 283 aaPredicted RBP17.78■□□□□ 0.44
SMAD4-201ENST00000342988 ZMYM2Q9UBW7 1377 aa17.78■□□□□ 0.44
SMAD4-201ENST00000342988 CSF1RP07333 972 aa17.78■□□□□ 0.44
SMAD4-201ENST00000342988 CSGALNACT1Q8TDX6 532 aa17.78■□□□□ 0.44
SMAD4-201ENST00000342988 DYNLL2Q96FJ2 89 aa17.78■□□□□ 0.44
SMAD4-201ENST00000342988 PAFAH2Q99487 392 aa17.78■□□□□ 0.44
SMAD4-201ENST00000342988 TRIM9Q9C026 710 aa17.78■□□□□ 0.44
SMAD4-201ENST00000342988 DCLK3Q9C098 648 aa17.78■□□□□ 0.44
SMAD4-201ENST00000342988 MDFIC2A0A1B0GVS7 189 aa17.78■□□□□ 0.44
SMAD4-201ENST00000342988 OR10H3O60404 316 aa17.78■□□□□ 0.44
SMAD4-201ENST00000342988 NMT1P30419 496 aaKnown RBP17.78■□□□□ 0.44
SMAD4-201ENST00000342988 BUD31P41223 144 aaPredicted RBP17.78■□□□□ 0.44
SMAD4-201ENST00000342988 PERM1Q5SV97 790 aa17.78■□□□□ 0.44
SMAD4-201ENST00000342988 C15orf40Q8WUR7 153 aa17.78■□□□□ 0.44
SMAD4-201ENST00000342988 OXNAD1Q96HP4 312 aaPredicted RBP17.78■□□□□ 0.44
SMAD4-201ENST00000342988 CCNE2O96020 404 aa17.78■□□□□ 0.44
SMAD4-201ENST00000342988 CASP1P29466 404 aa17.78■□□□□ 0.44
SMAD4-201ENST00000342988 EPHA7Q15375 998 aa17.78■□□□□ 0.44
SMAD4-201ENST00000342988 CYP4X1Q8N118 509 aa17.78■□□□□ 0.44
SMAD4-201ENST00000342988 TPCN2Q8NHX9 752 aa17.78■□□□□ 0.44
SMAD4-201ENST00000342988 ETNPPLQ8TBG4 499 aa17.78■□□□□ 0.44
SMAD4-201ENST00000342988 WDR24Q96S15 920 aa17.78■□□□□ 0.44
SMAD4-201ENST00000342988 CIPCQ9C0C6 399 aa17.78■□□□□ 0.44
SMAD4-201ENST00000342988 CDC42BPBQ9Y5S2 1711 aa17.78■□□□□ 0.44
SMAD4-201ENST00000342988 POLRMTO00411 1230 aaKnown RBP17.78■□□□□ 0.44
SMAD4-201ENST00000342988 PDCD5O14737 125 aa17.78■□□□□ 0.44
SMAD4-201ENST00000342988 MGAT5Q09328 741 aa17.78■□□□□ 0.44
SMAD4-201ENST00000342988 OR2L8Q8NGY9 312 aa17.78■□□□□ 0.44
SMAD4-201ENST00000342988 KAT2BQ92831 832 aa17.78■□□□□ 0.44
SMAD4-201ENST00000342988 SIPA1Q96FS4 1042 aa17.78■□□□□ 0.44
SMAD4-201ENST00000342988 TRIM64CA6NLI5 447 aa17.78■□□□□ 0.44
SMAD4-201ENST00000342988 MPZL2O60487 215 aa17.78■□□□□ 0.44
SMAD4-201ENST00000342988 C6orf222P0C671 652 aaPredicted RBP17.78■□□□□ 0.44
SMAD4-201ENST00000342988 CCZ1BP86790 482 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms