RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 M6PRP20645 277 aa18.74■□□□□ 0.59
SMPD1-201ENST00000342245 MPSTP25325 297 aa18.74■□□□□ 0.59
SMPD1-201ENST00000342245 GP5P40197 560 aa18.74■□□□□ 0.59
SMPD1-201ENST00000342245 NR4A2P43354 598 aa18.74■□□□□ 0.59
SMPD1-201ENST00000342245 IST1P53990 364 aa18.74■□□□□ 0.59
SMPD1-201ENST00000342245 BST2Q10589 180 aaKnown RBP18.74■□□□□ 0.59
SMPD1-201ENST00000342245 SUZ12Q15022 739 aaKnown RBP18.74■□□□□ 0.59
SMPD1-201ENST00000342245 DGUOKQ16854 277 aa18.74■□□□□ 0.59
SMPD1-201ENST00000342245 LDLRAP1Q5SW96 308 aa18.74■□□□□ 0.59
SMPD1-201ENST00000342245 CYP2R1Q6VVX0 501 aa18.74■□□□□ 0.59
SMPD1-201ENST00000342245 ZNF534Q76KX8 674 aa18.74■□□□□ 0.59
SMPD1-201ENST00000342245 CLIP4Q8N3C7 705 aa18.74■□□□□ 0.59
SMPD1-201ENST00000342245 MFSD4AQ8N468 514 aa18.74■□□□□ 0.59
SMPD1-201ENST00000342245 ESX1Q8N693 406 aa18.74■□□□□ 0.59
SMPD1-201ENST00000342245 PCDH20Q8N6Y1 951 aaKnown RBP18.74■□□□□ 0.59
SMPD1-201ENST00000342245 GATA5Q9BWX5 397 aaPredicted RBP18.74■□□□□ 0.59
SMPD1-201ENST00000342245 MUC3BQ9H195 1237 aa18.74■□□□□ 0.59
SMPD1-201ENST00000342245 CACNA2D2Q9NY47 1150 aa18.74■□□□□ 0.59
SMPD1-201ENST00000342245 EIF3LQ9Y262 564 aaKnown RBP18.74■□□□□ 0.59
SMPD1-201ENST00000342245 AURKAO14965 403 aa18.73■□□□□ 0.59
SMPD1-201ENST00000342245 EXTL3O43909 919 aa18.73■□□□□ 0.59
SMPD1-201ENST00000342245 KRT8P05787 483 aa18.73■□□□□ 0.59
SMPD1-201ENST00000342245 PSMA4P25789 261 aaKnown RBP18.73■□□□□ 0.59
SMPD1-201ENST00000342245 PLA2G16P53816 162 aa18.73■□□□□ 0.59
SMPD1-201ENST00000342245 MMRN1Q13201 1228 aa18.73■□□□□ 0.59
SMPD1-201ENST00000342245 PRKG1Q13976 671 aa18.73■□□□□ 0.59
SMPD1-201ENST00000342245 TDRD10Q5VZ19 366 aaKnown RBP18.73■□□□□ 0.59
SMPD1-201ENST00000342245 XAF1Q6GPH4 301 aa18.73■□□□□ 0.59
SMPD1-201ENST00000342245 PODNQ7Z5L7 613 aa18.73■□□□□ 0.59
SMPD1-201ENST00000342245 SLCO6A1Q86UG4 719 aa18.73■□□□□ 0.59
SMPD1-201ENST00000342245 HDAC11Q96DB2 347 aa18.73■□□□□ 0.59
SMPD1-201ENST00000342245 CPNE1Q99829 537 aa18.73■□□□□ 0.59
SMPD1-201ENST00000342245 DNAI2Q9GZS0 605 aa18.73■□□□□ 0.59
SMPD1-201ENST00000342245 RABL2AQ9UBK7 228 aaPredicted RBP18.73■□□□□ 0.59
SMPD1-201ENST00000342245 AGO2Q9UKV8 859 aaKnown RBP18.73■□□□□ 0.59
SMPD1-201ENST00000342245 ARID2Q68CP9 1835 aa18.73■□□□□ 0.59
SMPD1-201ENST00000342245 A6NL46 340 aa18.73■□□□□ 0.59
SMPD1-201ENST00000342245 MAN1A2O60476 641 aa18.73■□□□□ 0.59
SMPD1-201ENST00000342245 SRP72O76094 671 aaKnown RBP18.73■□□□□ 0.59
SMPD1-201ENST00000342245 TRUB2O95900 331 aaKnown RBP18.73■□□□□ 0.59
SMPD1-201ENST00000342245 ITIH1P19827 911 aa18.73■□□□□ 0.59
SMPD1-201ENST00000342245 GRK3P35626 688 aa18.73■□□□□ 0.59
SMPD1-201ENST00000342245 MAPK10P53779 464 aa18.73■□□□□ 0.59
SMPD1-201ENST00000342245 ECT2LQ008S8 904 aa18.73■□□□□ 0.59
SMPD1-201ENST00000342245 C19orf57Q0VDD7 668 aa18.73■□□□□ 0.59
SMPD1-201ENST00000342245 SKIV2LQ15477 1246 aaKnown RBP18.73■□□□□ 0.59
SMPD1-201ENST00000342245 CYBRD1Q53TN4 286 aa18.73■□□□□ 0.59
SMPD1-201ENST00000342245 GLRA4Q5JXX5 417 aa18.73■□□□□ 0.59
SMPD1-201ENST00000342245 ASCC1Q8N9N2 400 aaKnown RBP18.73■□□□□ 0.59
SMPD1-201ENST00000342245 ANKRD52Q8NB46 1076 aa18.73■□□□□ 0.59
SMPD1-201ENST00000342245 CLSTN3Q9BQT9 956 aa18.73■□□□□ 0.59
SMPD1-201ENST00000342245 FAM213AQ9BRX8 229 aa18.73■□□□□ 0.59
SMPD1-201ENST00000342245 RETREG1Q9H6L5 497 aa18.73■□□□□ 0.59
SMPD1-201ENST00000342245 NOL6Q9H6R4 1146 aaKnown RBP18.73■□□□□ 0.59
SMPD1-201ENST00000342245 ANKHQ9HCJ1 492 aa18.73■□□□□ 0.59
SMPD1-201ENST00000342245 SNX15Q9NRS6 342 aa18.73■□□□□ 0.59
SMPD1-201ENST00000342245 DHRS12A0PJE2 317 aa18.72■□□□□ 0.59
SMPD1-201ENST00000342245 KCNU1A8MYU2 1149 aa18.72■□□□□ 0.59
SMPD1-201ENST00000342245 ICMTO60725 284 aa18.72■□□□□ 0.59
SMPD1-201ENST00000342245 HLA-DOAP06340 250 aa18.72■□□□□ 0.59
SMPD1-201ENST00000342245 CD40LGP29965 261 aa18.72■□□□□ 0.59
SMPD1-201ENST00000342245 GPD2P43304 727 aa18.72■□□□□ 0.59
SMPD1-201ENST00000342245 ARCN1P48444 511 aaKnown RBP18.72■□□□□ 0.59
SMPD1-201ENST00000342245 LIPMQ5VYY2 423 aa18.72■□□□□ 0.59
SMPD1-201ENST00000342245 NPNTQ6UXI9 565 aa18.72■□□□□ 0.59
SMPD1-201ENST00000342245 SCML4Q8N228 414 aa18.72■□□□□ 0.59
SMPD1-201ENST00000342245 MPP5Q8N3R9 675 aa18.72■□□□□ 0.59
SMPD1-201ENST00000342245 SHCBP1Q8NEM2 672 aa18.72■□□□□ 0.59
SMPD1-201ENST00000342245 FKBP10Q96AY3 582 aa18.72■□□□□ 0.59
SMPD1-201ENST00000342245 APBA2Q99767 749 aa18.72■□□□□ 0.59
SMPD1-201ENST00000342245 UGT2A1Q9Y4X1 527 aa18.72■□□□□ 0.59
SMPD1-201ENST00000342245 SYNCRIPO60506 623 aaKnown RBP18.72■□□□□ 0.59
SMPD1-201ENST00000342245 FKBP9O95302 570 aa18.72■□□□□ 0.59
SMPD1-201ENST00000342245 CDH1P12830 882 aa18.72■□□□□ 0.59
SMPD1-201ENST00000342245 IFNA8P32881 189 aa18.72■□□□□ 0.59
SMPD1-201ENST00000342245 POLR2IP36954 125 aaKnown RBP18.72■□□□□ 0.59
SMPD1-201ENST00000342245 GRIK1P39086 918 aa18.72■□□□□ 0.59
SMPD1-201ENST00000342245 RPS9P46781 194 aaKnown RBP18.72■□□□□ 0.59
SMPD1-201ENST00000342245 GTF2IP78347 998 aa18.72■□□□□ 0.59
SMPD1-201ENST00000342245 ADARB1P78563 741 aaKnown RBP18.72■□□□□ 0.59
SMPD1-201ENST00000342245 GRAPQ13588 217 aa18.72■□□□□ 0.59
SMPD1-201ENST00000342245 KRR1Q13601 381 aaKnown RBP18.72■□□□□ 0.59
SMPD1-201ENST00000342245 SQLEQ14534 574 aa18.72■□□□□ 0.59
SMPD1-201ENST00000342245 STILQ15468 1287 aa18.72■□□□□ 0.59
SMPD1-201ENST00000342245 PPM1JQ5JR12 505 aa18.72■□□□□ 0.59
SMPD1-201ENST00000342245 REP15Q6BDI9 236 aa18.72■□□□□ 0.59
SMPD1-201ENST00000342245 SLC39A4Q6P5W5 647 aa18.72■□□□□ 0.59
SMPD1-201ENST00000342245 CDKL3Q8IVW4 592 aaPredicted RBP18.72■□□□□ 0.59
SMPD1-201ENST00000342245 GRAPLQ8TC17 118 aaPredicted RBP18.72■□□□□ 0.59
SMPD1-201ENST00000342245 APOBEC3GQ9HC16 384 aaKnown RBP18.72■□□□□ 0.59
SMPD1-201ENST00000342245 KMT5AQ9NQR1 393 aa18.72■□□□□ 0.59
SMPD1-201ENST00000342245 TBC1D13Q9NVG8 400 aa18.72■□□□□ 0.59
SMPD1-201ENST00000342245 NPAP1Q9NZP6 1156 aa18.72■□□□□ 0.59
SMPD1-201ENST00000342245 MN1Q10571 1320 aaPredicted RBP18.71■□□□□ 0.59
SMPD1-201ENST00000342245 ZNF831Q5JPB2 1677 aa18.71■□□□□ 0.59
SMPD1-201ENST00000342245 SAGE2PA6NJ88 616 aa18.71■□□□□ 0.59
SMPD1-201ENST00000342245 FYNP06241 537 aa18.71■□□□□ 0.59
SMPD1-201ENST00000342245 PGAM1P18669 254 aa18.71■□□□□ 0.59
SMPD1-201ENST00000342245 PPP5CP53041 499 aa18.71■□□□□ 0.59
SMPD1-201ENST00000342245 PICALMQ13492 652 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms