RNA–Protein interactions for RNA: ENST00000340993.10

TUBD1-202, Transcript of tubulin delta 1, humanhuman

TSL 1 (best) BASIC

Gene TUBD1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-202ENST00000340993 TTC31Q49AM3 519 aaPredicted RBP13.4□□□□□ -0.26
TUBD1-202ENST00000340993 SEL1L2Q5TEA6 688 aa13.4□□□□□ -0.26
TUBD1-202ENST00000340993 KDM1BQ8NB78 822 aa13.4□□□□□ -0.26
TUBD1-202ENST00000340993 ZBTB44Q8NCP5 570 aa13.4□□□□□ -0.26
TUBD1-202ENST00000340993 TRIM58Q8NG06 486 aa13.4□□□□□ -0.26
TUBD1-202ENST00000340993 PDCD6IPQ8WUM4 868 aaKnown RBP13.4□□□□□ -0.26
TUBD1-202ENST00000340993 GAB3Q8WWW8 586 aa13.4□□□□□ -0.26
TUBD1-202ENST00000340993 P3H4Q92791 437 aa13.4□□□□□ -0.26
TUBD1-202ENST00000340993 ARRDC3Q96B67 414 aa13.4□□□□□ -0.26
TUBD1-202ENST00000340993 GDAP1L1Q96MZ0 367 aa13.4□□□□□ -0.26
TUBD1-202ENST00000340993 HEPHQ9BQS7 1158 aa13.4□□□□□ -0.26
TUBD1-202ENST00000340993 GPR174Q9BXC1 333 aa13.4□□□□□ -0.26
TUBD1-202ENST00000340993 CEP44Q9C0F1 390 aa13.4□□□□□ -0.26
TUBD1-202ENST00000340993 NEUROG2Q9H2A3 272 aa13.4□□□□□ -0.26
TUBD1-202ENST00000340993 PABPC3Q9H361 631 aaKnown RBP13.4□□□□□ -0.26
TUBD1-202ENST00000340993 R3HDM2Q9Y2K5 976 aaKnown RBP13.4□□□□□ -0.26
TUBD1-202ENST00000340993 PCDHGA2Q9Y5H1 932 aa13.4□□□□□ -0.26
TUBD1-202ENST00000340993 WASF2Q9Y6W5 498 aa13.4□□□□□ -0.26
TUBD1-202ENST00000340993 RIF1Q5UIP0 2472 aaKnown RBP13.4□□□□□ -0.26
TUBD1-202ENST00000340993 GOLGA8CPA6NN73 597 aa13.4□□□□□ -0.26
TUBD1-202ENST00000340993 MCF2LO15068 1137 aa13.4□□□□□ -0.26
TUBD1-202ENST00000340993 NDUFS2O75306 463 aa13.4□□□□□ -0.26
TUBD1-202ENST00000340993 PEX11BO96011 259 aa13.4□□□□□ -0.26
TUBD1-202ENST00000340993 JCHAINP01591 159 aa13.4□□□□□ -0.26
TUBD1-202ENST00000340993 ZFXP17010 805 aaPredicted RBP13.4□□□□□ -0.26
TUBD1-202ENST00000340993 MX2P20592 715 aa13.4□□□□□ -0.26
TUBD1-202ENST00000340993 P2RY2P41231 377 aa13.4□□□□□ -0.26
TUBD1-202ENST00000340993 DHPSP49366 369 aaPredicted RBP13.4□□□□□ -0.26
TUBD1-202ENST00000340993 NUBP1P53384 320 aa13.4□□□□□ -0.26
TUBD1-202ENST00000340993 CNTN1Q12860 1018 aa13.4□□□□□ -0.26
TUBD1-202ENST00000340993 MYLK3Q32MK0 819 aa13.4□□□□□ -0.26
TUBD1-202ENST00000340993 MARC1Q5VT66 337 aa13.4□□□□□ -0.26
TUBD1-202ENST00000340993 ZC3H14Q6PJT7 736 aaKnown RBP13.4□□□□□ -0.26
TUBD1-202ENST00000340993 CAMK1DQ8IU85 385 aa13.4□□□□□ -0.26
TUBD1-202ENST00000340993 CCDC13Q8IYE1 715 aa13.4□□□□□ -0.26
TUBD1-202ENST00000340993 OR14C36Q8NHC7 312 aa13.4□□□□□ -0.26
TUBD1-202ENST00000340993 ACTL9Q8TC94 416 aa13.4□□□□□ -0.26
TUBD1-202ENST00000340993 ATG4AQ8WYN0 398 aa13.4□□□□□ -0.26
TUBD1-202ENST00000340993 KLHL32Q96NJ5 620 aa13.4□□□□□ -0.26
TUBD1-202ENST00000340993 AGAP3Q96P47 875 aa13.4□□□□□ -0.26
TUBD1-202ENST00000340993 HINFPQ9BQA5 517 aa13.4□□□□□ -0.26
TUBD1-202ENST00000340993 TLR10Q9BXR5 811 aa13.4□□□□□ -0.26
TUBD1-202ENST00000340993 DYRK4Q9NR20 520 aa13.4□□□□□ -0.26
TUBD1-202ENST00000340993 RBM22Q9NW64 420 aaKnown RBP eCLIP13.4□□□□□ -0.26
TUBD1-202ENST00000340993 SMARCAL1Q9NZC9 954 aa13.4□□□□□ -0.26
TUBD1-202ENST00000340993 SEPT3Q9UH03 358 aa13.4□□□□□ -0.26
TUBD1-202ENST00000340993 PPM1HQ9ULR3 514 aa13.4□□□□□ -0.26
TUBD1-202ENST00000340993 PLXND1Q9Y4D7 1925 aa13.39□□□□□ -0.27
TUBD1-202ENST00000340993 PI4KAP42356 2102 aa13.39□□□□□ -0.27
TUBD1-202ENST00000340993 C1QTNF3-AMACRE9PGA6 284 aa13.39□□□□□ -0.27
TUBD1-202ENST00000340993 KIF5CO60282 957 aa13.39□□□□□ -0.27
TUBD1-202ENST00000340993 ATP1A1P05023 1023 aaKnown RBP13.39□□□□□ -0.27
TUBD1-202ENST00000340993 HLA-DQB2P05538 268 aa13.39□□□□□ -0.27
TUBD1-202ENST00000340993 CCNB1P14635 433 aa13.39□□□□□ -0.27
TUBD1-202ENST00000340993 ITIH2P19823 946 aa13.39□□□□□ -0.27
TUBD1-202ENST00000340993 MAOBP27338 520 aa13.39□□□□□ -0.27
TUBD1-202ENST00000340993 DRD3P35462 400 aa13.39□□□□□ -0.27
TUBD1-202ENST00000340993 CETN2P41208 172 aa13.39□□□□□ -0.27
TUBD1-202ENST00000340993 DSC2Q02487 901 aa13.39□□□□□ -0.27
TUBD1-202ENST00000340993 PPP2R5EQ16537 467 aa13.39□□□□□ -0.27
TUBD1-202ENST00000340993 TAZQ16635 292 aa13.39□□□□□ -0.27
TUBD1-202ENST00000340993 ZNF662Q6ZS27 426 aa13.39□□□□□ -0.27
TUBD1-202ENST00000340993 DSG4Q86SJ6 1040 aa13.39□□□□□ -0.27
TUBD1-202ENST00000340993 TAB3Q8N5C8 712 aaPredicted RBP13.39□□□□□ -0.27
TUBD1-202ENST00000340993 KLK6Q92876 244 aa13.39□□□□□ -0.27
TUBD1-202ENST00000340993 NSMCE3Q96MG7 304 aa13.39□□□□□ -0.27
TUBD1-202ENST00000340993 SMOC1Q9H4F8 434 aa13.39□□□□□ -0.27
TUBD1-202ENST00000340993 SCUBE2Q9NQ36 999 aa13.39□□□□□ -0.27
TUBD1-202ENST00000340993 ITM2BQ9Y287 266 aa13.39□□□□□ -0.27
TUBD1-202ENST00000340993 KNL1Q8NG31 2342 aa13.39□□□□□ -0.27
TUBD1-202ENST00000340993 TRPM6Q9BX84 2022 aa13.39□□□□□ -0.27
TUBD1-202ENST00000340993 PPP1R12AO14974 1030 aaPredicted RBP13.38□□□□□ -0.27
TUBD1-202ENST00000340993 CEP104O60308 925 aa13.38□□□□□ -0.27
TUBD1-202ENST00000340993 ADH1BP00325 375 aa13.38□□□□□ -0.27
TUBD1-202ENST00000340993 GSRP00390 522 aa13.38□□□□□ -0.27
TUBD1-202ENST00000340993 TGM2P21980 687 aa13.38□□□□□ -0.27
TUBD1-202ENST00000340993 CD6P30203 668 aa13.38□□□□□ -0.27
TUBD1-202ENST00000340993 MAT2AP31153 395 aaKnown RBP13.38□□□□□ -0.27
TUBD1-202ENST00000340993 PTGER3P43115 390 aa13.38□□□□□ -0.27
TUBD1-202ENST00000340993 GNG11P61952 73 aa13.38□□□□□ -0.27
TUBD1-202ENST00000340993 PDK1Q15118 436 aa13.38□□□□□ -0.27
TUBD1-202ENST00000340993 INO80DQ53TQ3 878 aaPredicted RBP13.38□□□□□ -0.27
TUBD1-202ENST00000340993 BBS12Q6ZW61 710 aa13.38□□□□□ -0.27
TUBD1-202ENST00000340993 PARS2Q7L3T8 475 aaKnown RBP13.38□□□□□ -0.27
TUBD1-202ENST00000340993 KDELC2Q7Z4H8 507 aa13.38□□□□□ -0.27
TUBD1-202ENST00000340993 TFB1MQ8WVM0 346 aaKnown RBP13.38□□□□□ -0.27
TUBD1-202ENST00000340993 NELL1Q92832 810 aa13.38□□□□□ -0.27
TUBD1-202ENST00000340993 HDAC11Q96DB2 347 aa13.38□□□□□ -0.27
TUBD1-202ENST00000340993 OLFM3Q96PB7 478 aa13.38□□□□□ -0.27
TUBD1-202ENST00000340993 FAM126AQ9BYI3 521 aaPredicted RBP13.38□□□□□ -0.27
TUBD1-202ENST00000340993 MIR1-1HGQ9H1L0 117 aa13.38□□□□□ -0.27
TUBD1-202ENST00000340993 C6orf106Q9H6K1 298 aaPredicted RBP13.38□□□□□ -0.27
TUBD1-202ENST00000340993 ITM2CQ9NQX7 267 aa13.38□□□□□ -0.27
TUBD1-202ENST00000340993 USP36Q9P275 1121 aaKnown RBP13.38□□□□□ -0.27
TUBD1-202ENST00000340993 GGT7Q9UJ14 662 aa13.38□□□□□ -0.27
TUBD1-202ENST00000340993 SMG5Q9UPR3 1016 aaKnown RBP13.38□□□□□ -0.27
TUBD1-202ENST00000340993 NCKAP1Q9Y2A7 1128 aa13.38□□□□□ -0.27
TUBD1-202ENST00000340993 CFAP54Q96N23 3096 aa13.38□□□□□ -0.27
TUBD1-202ENST00000340993 A8MX80 341 aa13.37□□□□□ -0.27
TUBD1-202ENST00000340993 ZNF487B1APH4 448 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms