RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 TSEN34Q9BSV6 310 aaKnown RBP10.3□□□□□ -0.76
RBFOX1-202ENST00000340209 NAT9Q9BTE0 207 aa10.3□□□□□ -0.76
RBFOX1-202ENST00000340209 VPS28Q9UK41 221 aa10.3□□□□□ -0.76
RBFOX1-202ENST00000340209 PHF24Q9UPV7 400 aa10.3□□□□□ -0.76
RBFOX1-202ENST00000340209 NCF1BA6NI72 391 aaPredicted RBP10.29□□□□□ -0.76
RBFOX1-202ENST00000340209 NCF1CA8MVU1 366 aaPredicted RBP10.29□□□□□ -0.76
RBFOX1-202ENST00000340209 GYG2O15488 501 aa10.29□□□□□ -0.76
RBFOX1-202ENST00000340209 MLNP12872 115 aa10.29□□□□□ -0.76
RBFOX1-202ENST00000340209 NCF1P14598 390 aaPredicted RBP10.29□□□□□ -0.76
RBFOX1-202ENST00000340209 SLC6A4P31645 630 aa10.29□□□□□ -0.76
RBFOX1-202ENST00000340209 MAGEA3P43357 314 aa10.29□□□□□ -0.76
RBFOX1-202ENST00000340209 NAGLUP54802 743 aa10.29□□□□□ -0.76
RBFOX1-202ENST00000340209 TEDDM1Q5T9Z0 273 aa10.29□□□□□ -0.76
RBFOX1-202ENST00000340209 TIGD7Q6NT04 549 aaPredicted RBP10.29□□□□□ -0.76
RBFOX1-202ENST00000340209 OR13C4Q8NGS5 318 aa10.29□□□□□ -0.76
RBFOX1-202ENST00000340209 DTX3LQ8TDB6 740 aa10.29□□□□□ -0.76
RBFOX1-202ENST00000340209 PGAP3Q96FM1 320 aaPredicted RBP10.29□□□□□ -0.76
RBFOX1-202ENST00000340209 SLC22A12Q96S37 553 aa10.29□□□□□ -0.76
RBFOX1-202ENST00000340209 RBBP8Q99708 897 aa10.29□□□□□ -0.76
RBFOX1-202ENST00000340209 CASS4Q9NQ75 786 aa10.29□□□□□ -0.76
RBFOX1-202ENST00000340209 DNMT3LQ9UJW3 386 aa10.29□□□□□ -0.76
RBFOX1-202ENST00000340209 NUMBLQ9Y6R0 609 aa10.29□□□□□ -0.76
RBFOX1-202ENST00000340209 SCN5AQ14524 2016 aa10.29□□□□□ -0.76
RBFOX1-202ENST00000340209 ZCWPW2A0A1B0GU75 182 aa10.29□□□□□ -0.76
RBFOX1-202ENST00000340209 COCHO43405 550 aa10.29□□□□□ -0.76
RBFOX1-202ENST00000340209 AHSGP02765 367 aa10.29□□□□□ -0.76
RBFOX1-202ENST00000340209 OXCT1P55809 520 aa10.29□□□□□ -0.76
RBFOX1-202ENST00000340209 ELF3P78545 371 aaPredicted RBP10.29□□□□□ -0.76
RBFOX1-202ENST00000340209 SLC18A2Q05940 514 aa10.29□□□□□ -0.76
RBFOX1-202ENST00000340209 NSUN2Q08J23 767 aaKnown RBP eCLIP10.29□□□□□ -0.76
RBFOX1-202ENST00000340209 RNF219Q5W0B1 726 aaPredicted RBP10.29□□□□□ -0.76
RBFOX1-202ENST00000340209 NEPROQ6NW34 567 aa10.29□□□□□ -0.76
RBFOX1-202ENST00000340209 WDR75Q8IWA0 830 aaKnown RBP10.29□□□□□ -0.76
RBFOX1-202ENST00000340209 OR52K2Q8NGK3 314 aa10.29□□□□□ -0.76
RBFOX1-202ENST00000340209 DDI1Q8WTU0 396 aa10.29□□□□□ -0.76
RBFOX1-202ENST00000340209 MRGPRX2Q96LB1 330 aa10.29□□□□□ -0.76
RBFOX1-202ENST00000340209 C8orf48Q96LL4 319 aa10.29□□□□□ -0.76
RBFOX1-202ENST00000340209 TBATAQ96M53 351 aa10.29□□□□□ -0.76
RBFOX1-202ENST00000340209 NUDCD1Q96RS6 583 aa10.29□□□□□ -0.76
RBFOX1-202ENST00000340209 PLCD4Q9BRC7 762 aa10.29□□□□□ -0.76
RBFOX1-202ENST00000340209 NOL6Q9H6R4 1146 aaKnown RBP10.29□□□□□ -0.76
RBFOX1-202ENST00000340209 FAM50BQ9Y247 325 aa10.29□□□□□ -0.76
RBFOX1-202ENST00000340209 PDCD11Q14690 1871 aaKnown RBP10.29□□□□□ -0.76
RBFOX1-202ENST00000340209 ZNF236Q9UL36 1845 aa10.29□□□□□ -0.76
RBFOX1-202ENST00000340209 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.29□□□□□ -0.76
RBFOX1-202ENST00000340209 GPR39O43194 453 aa10.29□□□□□ -0.76
RBFOX1-202ENST00000340209 PLIN3O60664 434 aa10.29□□□□□ -0.76
RBFOX1-202ENST00000340209 CHRNGP07510 517 aa10.29□□□□□ -0.76
RBFOX1-202ENST00000340209 CTPS1P17812 591 aa10.29□□□□□ -0.76
RBFOX1-202ENST00000340209 ITGB6P18564 788 aa10.29□□□□□ -0.76
RBFOX1-202ENST00000340209 GKP32189 559 aa10.29□□□□□ -0.76
RBFOX1-202ENST00000340209 ABL2P42684 1182 aa10.29□□□□□ -0.76
RBFOX1-202ENST00000340209 ETV4P43268 484 aa10.29□□□□□ -0.76
RBFOX1-202ENST00000340209 SERPINH1P50454 418 aaKnown RBP10.29□□□□□ -0.76
RBFOX1-202ENST00000340209 ELAVL2Q12926 359 aaKnown RBP10.29□□□□□ -0.76
RBFOX1-202ENST00000340209 ZNF177Q13360 481 aaPredicted RBP10.29□□□□□ -0.76
RBFOX1-202ENST00000340209 TRIP4Q15650 581 aaPredicted RBP10.29□□□□□ -0.76
RBFOX1-202ENST00000340209 ACCSLQ4AC99 568 aa10.29□□□□□ -0.76
RBFOX1-202ENST00000340209 LRRC73Q5JTD7 316 aa10.29□□□□□ -0.76
RBFOX1-202ENST00000340209 PCID2Q5JVF3 399 aa10.29□□□□□ -0.76
RBFOX1-202ENST00000340209 NADSYN1Q6IA69 706 aa10.29□□□□□ -0.76
RBFOX1-202ENST00000340209 MARK2Q7KZI7 788 aaKnown RBP10.29□□□□□ -0.76
RBFOX1-202ENST00000340209 PIM3Q86V86 326 aa10.29□□□□□ -0.76
RBFOX1-202ENST00000340209 PLCD3Q8N3E9 789 aa10.29□□□□□ -0.76
RBFOX1-202ENST00000340209 NXNL1Q96CM4 212 aa10.29□□□□□ -0.76
RBFOX1-202ENST00000340209 DNAJC1Q96KC8 554 aaKnown RBP10.29□□□□□ -0.76
RBFOX1-202ENST00000340209 ZNF558Q96NG5 402 aa10.29□□□□□ -0.76
RBFOX1-202ENST00000340209 KNL1Q8NG31 2342 aa10.28□□□□□ -0.76
RBFOX1-202ENST00000340209 ZNF487B1APH4 448 aa10.28□□□□□ -0.76
RBFOX1-202ENST00000340209 HOXA2O43364 376 aa10.28□□□□□ -0.76
RBFOX1-202ENST00000340209 TBL1XO60907 577 aa10.28□□□□□ -0.76
RBFOX1-202ENST00000340209 PAMP19021 973 aa10.28□□□□□ -0.76
RBFOX1-202ENST00000340209 CDH18Q13634 790 aa10.28□□□□□ -0.76
RBFOX1-202ENST00000340209 LBRQ14739 615 aaKnown RBP10.28□□□□□ -0.76
RBFOX1-202ENST00000340209 ATXN7L2Q5T6C5 722 aaPredicted RBP10.28□□□□□ -0.76
RBFOX1-202ENST00000340209 PKN3Q6P5Z2 889 aa10.28□□□□□ -0.76
RBFOX1-202ENST00000340209 YTHDF3Q7Z739 585 aaKnown RBP10.28□□□□□ -0.76
RBFOX1-202ENST00000340209 ANKLE1Q8NAG6 615 aa10.28□□□□□ -0.76
RBFOX1-202ENST00000340209 IGSF21Q96ID5 467 aa10.28□□□□□ -0.76
RBFOX1-202ENST00000340209 HHIPL1Q96JK4 782 aa10.28□□□□□ -0.76
RBFOX1-202ENST00000340209 VAT1Q99536 393 aa10.28□□□□□ -0.76
RBFOX1-202ENST00000340209 RNF38Q9H0F5 515 aa10.28□□□□□ -0.76
RBFOX1-202ENST00000340209 NMRAL1Q9HBL8 299 aa10.28□□□□□ -0.76
RBFOX1-202ENST00000340209 XPR1Q9UBH6 696 aa10.28□□□□□ -0.76
RBFOX1-202ENST00000340209 YIPF1Q9Y548 306 aa10.28□□□□□ -0.76
RBFOX1-202ENST00000340209 MUSKO15146 869 aa10.28□□□□□ -0.76
RBFOX1-202ENST00000340209 OAS1P00973 400 aaKnown RBP10.28□□□□□ -0.76
RBFOX1-202ENST00000340209 C1QAP02745 245 aa10.28□□□□□ -0.76
RBFOX1-202ENST00000340209 HNRNPLP14866 589 aaKnown RBP eCLIP10.28□□□□□ -0.76
RBFOX1-202ENST00000340209 RHOQP17081 205 aa10.28□□□□□ -0.76
RBFOX1-202ENST00000340209 SYN1P17600 705 aa10.28□□□□□ -0.76
RBFOX1-202ENST00000340209 HCAR3P49019 387 aa10.28□□□□□ -0.76
RBFOX1-202ENST00000340209 NPY2RP49146 381 aa10.28□□□□□ -0.76
RBFOX1-202ENST00000340209 ARSDP51689 593 aa10.28□□□□□ -0.76
RBFOX1-202ENST00000340209 GRTP1Q5TC63 336 aa10.28□□□□□ -0.76
RBFOX1-202ENST00000340209 SLC39A5Q6ZMH5 540 aa10.28□□□□□ -0.76
RBFOX1-202ENST00000340209 CLNKQ7Z7G1 428 aa10.28□□□□□ -0.76
RBFOX1-202ENST00000340209 LZTR1Q8N653 840 aa10.28□□□□□ -0.76
RBFOX1-202ENST00000340209 SREK1Q8WXA9 508 aaKnown RBP10.28□□□□□ -0.76
RBFOX1-202ENST00000340209 MYLIPQ8WY64 445 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms