RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 POP4O95707 220 aaKnown RBP15.48■□□□□ 0.07
UBE3B-201ENST00000340074 MAOBP27338 520 aa15.48■□□□□ 0.07
UBE3B-201ENST00000340074 ADPRHP54922 357 aa15.48■□□□□ 0.07
UBE3B-201ENST00000340074 GBE1Q04446 702 aa15.48■□□□□ 0.07
UBE3B-201ENST00000340074 SLC10A7Q0GE19 358 aa15.48■□□□□ 0.07
UBE3B-201ENST00000340074 SLC10A2Q12908 348 aaPredicted RBP15.48■□□□□ 0.07
UBE3B-201ENST00000340074 RFTN1Q14699 578 aaPredicted RBP15.48■□□□□ 0.07
UBE3B-201ENST00000340074 PLA2G2CQ5R387 149 aa15.48■□□□□ 0.07
UBE3B-201ENST00000340074 SYCP2LQ5T4T6 812 aa15.48■□□□□ 0.07
UBE3B-201ENST00000340074 AGBL4Q5VU57 503 aa15.48■□□□□ 0.07
UBE3B-201ENST00000340074 DCAF12L1Q5VU92 463 aa15.48■□□□□ 0.07
UBE3B-201ENST00000340074 NCEH1Q6PIU2 408 aa15.48■□□□□ 0.07
UBE3B-201ENST00000340074 RGL4Q8IZJ4 473 aa15.48■□□□□ 0.07
UBE3B-201ENST00000340074 LRRC57Q8N9N7 239 aa15.48■□□□□ 0.07
UBE3B-201ENST00000340074 TSEN2Q8NCE0 465 aaKnown RBP15.48■□□□□ 0.07
UBE3B-201ENST00000340074 KIAA1524Q8TCG1 905 aa15.48■□□□□ 0.07
UBE3B-201ENST00000340074 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.48■□□□□ 0.07
UBE3B-201ENST00000340074 KRT35Q92764 455 aa15.48■□□□□ 0.07
UBE3B-201ENST00000340074 ZNF599Q96NL3 588 aa15.48■□□□□ 0.07
UBE3B-201ENST00000340074 CINPQ9BW66 212 aaPredicted RBP15.48■□□□□ 0.07
UBE3B-201ENST00000340074 DYRK4Q9NR20 520 aa15.48■□□□□ 0.07
UBE3B-201ENST00000340074 SEMA4GQ9NTN9 838 aa15.48■□□□□ 0.07
UBE3B-201ENST00000340074 EVLQ9UI08 416 aaPredicted RBP15.48■□□□□ 0.07
UBE3B-201ENST00000340074 PILRBQ9UKJ0 227 aa15.48■□□□□ 0.07
UBE3B-201ENST00000340074 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.48■□□□□ 0.07
UBE3B-201ENST00000340074 MEI4A8MW99 385 aa15.47■□□□□ 0.07
UBE3B-201ENST00000340074 INSIG1O15503 277 aa15.47■□□□□ 0.07
UBE3B-201ENST00000340074 PEX11BO96011 259 aa15.47■□□□□ 0.07
UBE3B-201ENST00000340074 GARSP41250 739 aaKnown RBP15.47■□□□□ 0.07
UBE3B-201ENST00000340074 CDKN2BP42772 138 aa15.47■□□□□ 0.07
UBE3B-201ENST00000340074 GALNT2Q10471 571 aa15.47■□□□□ 0.07
UBE3B-201ENST00000340074 LBRQ14739 615 aaKnown RBP15.47■□□□□ 0.07
UBE3B-201ENST00000340074 LLGL1Q15334 1064 aa15.47■□□□□ 0.07
UBE3B-201ENST00000340074 CSRP2Q16527 193 aa15.47■□□□□ 0.07
UBE3B-201ENST00000340074 IFI16Q16666 785 aaKnown RBP15.47■□□□□ 0.07
UBE3B-201ENST00000340074 PIP5KL1Q5T9C9 394 aa15.47■□□□□ 0.07
UBE3B-201ENST00000340074 TMCO4Q5TGY1 634 aa15.47■□□□□ 0.07
UBE3B-201ENST00000340074 SLC9A4Q6AI14 798 aa15.47■□□□□ 0.07
UBE3B-201ENST00000340074 RFX6Q8HWS3 928 aa15.47■□□□□ 0.07
UBE3B-201ENST00000340074 SYT12Q8IV01 421 aa15.47■□□□□ 0.07
UBE3B-201ENST00000340074 KIAA2013Q8IYS2 634 aa15.47■□□□□ 0.07
UBE3B-201ENST00000340074 KATNAL2Q8IYT4 538 aa15.47■□□□□ 0.07
UBE3B-201ENST00000340074 PLD5Q8N7P1 536 aa15.47■□□□□ 0.07
UBE3B-201ENST00000340074 PPP1R16AQ96I34 528 aa15.47■□□□□ 0.07
UBE3B-201ENST00000340074 LRIG1Q96JA1 1093 aa15.47■□□□□ 0.07
UBE3B-201ENST00000340074 PCED1AQ9H1Q7 454 aa15.47■□□□□ 0.07
UBE3B-201ENST00000340074 DNAH14Q0VDD8 3507 aa15.47■□□□□ 0.07
UBE3B-201ENST00000340074 TMEM131Q92545 1883 aa15.47■□□□□ 0.07
UBE3B-201ENST00000340074 LRRC72A6NJI9 287 aa15.46■□□□□ 0.07
UBE3B-201ENST00000340074 PATE3B3GLJ2 98 aa15.46■□□□□ 0.07
UBE3B-201ENST00000340074 APOL1O14791 398 aa15.46■□□□□ 0.07
UBE3B-201ENST00000340074 SLC7A4O43246 635 aa15.46■□□□□ 0.07
UBE3B-201ENST00000340074 PLRG1O43660 514 aaKnown RBP15.46■□□□□ 0.07
UBE3B-201ENST00000340074 FSBPO95073 299 aa15.46■□□□□ 0.07
UBE3B-201ENST00000340074 ZRANB2O95218 330 aaKnown RBP eCLIP15.46■□□□□ 0.07
UBE3B-201ENST00000340074 UGT2B4P06133 528 aa15.46■□□□□ 0.07
UBE3B-201ENST00000340074 ZNF806P0C7X5 589 aa15.46■□□□□ 0.07
UBE3B-201ENST00000340074 ITGB7P26010 798 aa15.46■□□□□ 0.07
UBE3B-201ENST00000340074 CTNNA1P35221 906 aaKnown RBP15.46■□□□□ 0.07
UBE3B-201ENST00000340074 RGRP47804 291 aa15.46■□□□□ 0.07
UBE3B-201ENST00000340074 RAD51Q06609 339 aa15.46■□□□□ 0.07
UBE3B-201ENST00000340074 SF3A2Q15428 464 aaKnown RBP15.46■□□□□ 0.07
UBE3B-201ENST00000340074 TAZQ16635 292 aa15.46■□□□□ 0.07
UBE3B-201ENST00000340074 WDR45BQ5MNZ6 344 aa15.46■□□□□ 0.07
UBE3B-201ENST00000340074 SPOCD1Q6ZMY3 1216 aa15.46■□□□□ 0.07
UBE3B-201ENST00000340074 ERN2Q76MJ5 926 aaKnown RBP15.46■□□□□ 0.07
UBE3B-201ENST00000340074 LRRC49Q8IUZ0 686 aa15.46■□□□□ 0.07
UBE3B-201ENST00000340074 OR2T34Q8NGX1 318 aa15.46■□□□□ 0.07
UBE3B-201ENST00000340074 LRRN4Q8WUT4 740 aa15.46■□□□□ 0.07
UBE3B-201ENST00000340074 DNASE2BQ8WZ79 361 aa15.46■□□□□ 0.07
UBE3B-201ENST00000340074 SNX19Q92543 992 aa15.46■□□□□ 0.07
UBE3B-201ENST00000340074 BIRC7Q96CA5 298 aa15.46■□□□□ 0.07
UBE3B-201ENST00000340074 KLHL32Q96NJ5 620 aa15.46■□□□□ 0.07
UBE3B-201ENST00000340074 OSBPL1AQ9BXW6 950 aa15.46■□□□□ 0.07
UBE3B-201ENST00000340074 HDAC8Q9BY41 377 aa15.46■□□□□ 0.07
UBE3B-201ENST00000340074 TSGA10Q9BZW7 698 aa15.46■□□□□ 0.07
UBE3B-201ENST00000340074 VPS45Q9NRW7 570 aa15.46■□□□□ 0.07
UBE3B-201ENST00000340074 DTLQ9NZJ0 730 aa15.46■□□□□ 0.07
UBE3B-201ENST00000340074 SEPT3Q9UH03 358 aa15.46■□□□□ 0.07
UBE3B-201ENST00000340074 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.46■□□□□ 0.07
UBE3B-201ENST00000340074 PCDHA3Q9Y5H8 950 aa15.46■□□□□ 0.07
UBE3B-201ENST00000340074 HEY1Q9Y5J3 304 aa15.46■□□□□ 0.07
UBE3B-201ENST00000340074 CACNA1EQ15878 2313 aa15.46■□□□□ 0.07
UBE3B-201ENST00000340074 TBC1D3DA0A087WVF3 549 aa15.45■□□□□ 0.06
UBE3B-201ENST00000340074 TBC1D3IA0A087WXS9 549 aa15.45■□□□□ 0.06
UBE3B-201ENST00000340074 TBC1D3EA0A087X179 549 aa15.45■□□□□ 0.06
UBE3B-201ENST00000340074 TBC1D3KA0A087X1G2 549 aa15.45■□□□□ 0.06
UBE3B-201ENST00000340074 TBC1D3FA6NER0 549 aaPredicted RBP15.45■□□□□ 0.06
UBE3B-201ENST00000340074 TBC1D3LB9A6J9 549 aa15.45■□□□□ 0.06
UBE3B-201ENST00000340074 MUSKO15146 869 aa15.45■□□□□ 0.06
UBE3B-201ENST00000340074 NRDCO43847 1150 aa15.45■□□□□ 0.06
UBE3B-201ENST00000340074 GJB3O75712 270 aa15.45■□□□□ 0.06
UBE3B-201ENST00000340074 IGHV4-34P06331 123 aa15.45■□□□□ 0.06
UBE3B-201ENST00000340074 TBC1D3HP0C7X1 549 aa15.45■□□□□ 0.06
UBE3B-201ENST00000340074 KRT10P13645 584 aa15.45■□□□□ 0.06
UBE3B-201ENST00000340074 CTNNA2P26232 953 aa15.45■□□□□ 0.06
UBE3B-201ENST00000340074 TAS2R38P59533 333 aa15.45■□□□□ 0.06
UBE3B-201ENST00000340074 DYNLT1P63172 113 aa15.45■□□□□ 0.06
UBE3B-201ENST00000340074 ZNF805Q5CZA5 627 aa15.45■□□□□ 0.06
UBE3B-201ENST00000340074 TFDP3Q5H9I0 405 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms