RNA–Protein interactions for RNA: ENST00000337659.10

PRPF4B-201, Transcript of pre-mRNA processing factor 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF4B, Length 4,415 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-201ENST00000337659 FGF3P11487 239 aaPredicted RBP5.44□□□□□ -1.54
PRPF4B-201ENST00000337659 ACPPP15309 386 aa5.44□□□□□ -1.54
PRPF4B-201ENST00000337659 ARF5P84085 180 aa5.44□□□□□ -1.54
PRPF4B-201ENST00000337659 TAF10Q12962 218 aa5.44□□□□□ -1.54
PRPF4B-201ENST00000337659 HLTFQ14527 1009 aaKnown RBP eCLIP5.44□□□□□ -1.549e-7■■□□□ 11.9
PRPF4B-201ENST00000337659 SLC1A5Q15758 541 aa5.44□□□□□ -1.54
PRPF4B-201ENST00000337659 C3orf62Q6ZUJ4 267 aa5.44□□□□□ -1.54
PRPF4B-201ENST00000337659 CCDC149Q6ZUS6 474 aa5.44□□□□□ -1.54
PRPF4B-201ENST00000337659 PHLDB2Q86SQ0 1253 aa5.44□□□□□ -1.54
PRPF4B-201ENST00000337659 MFN1Q8IWA4 741 aa5.44□□□□□ -1.54
PRPF4B-201ENST00000337659 KIRREL3Q8IZU9 778 aa5.44□□□□□ -1.54
PRPF4B-201ENST00000337659 PPP1R13LQ8WUF5 828 aa5.44□□□□□ -1.54
PRPF4B-201ENST00000337659 PTCD3Q96EY7 689 aaKnown RBP5.44□□□□□ -1.54
PRPF4B-201ENST00000337659 CCDC114Q96M63 670 aa5.44□□□□□ -1.54
PRPF4B-201ENST00000337659 FERMT1Q9BQL6 677 aa5.44□□□□□ -1.54
PRPF4B-201ENST00000337659 FAM167BQ9BTA0 163 aa5.44□□□□□ -1.54
PRPF4B-201ENST00000337659 TDRD1Q9BXT4 1180 aaKnown RBP5.44□□□□□ -1.54
PRPF4B-201ENST00000337659 CD248Q9HCU0 757 aa5.44□□□□□ -1.54
PRPF4B-201ENST00000337659 DKK3Q9UBP4 350 aa5.44□□□□□ -1.54
PRPF4B-201ENST00000337659 DCDC2Q9UHG0 476 aa5.44□□□□□ -1.54
PRPF4B-201ENST00000337659 NOD1Q9Y239 953 aa5.44□□□□□ -1.54
PRPF4B-201ENST00000337659 A0A087X1B8 175 aa5.43□□□□□ -1.54
PRPF4B-201ENST00000337659 GOLGA6L10A6NI86 522 aa5.43□□□□□ -1.54
PRPF4B-201ENST00000337659 TBKBP1A7MCY6 615 aa5.43□□□□□ -1.54
PRPF4B-201ENST00000337659 BPGMP07738 259 aa5.43□□□□□ -1.54
PRPF4B-201ENST00000337659 ATP5C1P36542 298 aaKnown RBP5.43□□□□□ -1.54
PRPF4B-201ENST00000337659 BMPR1AP36894 532 aa5.43□□□□□ -1.54
PRPF4B-201ENST00000337659 MAPK8P45983 427 aa5.43□□□□□ -1.54
PRPF4B-201ENST00000337659 SATB1Q01826 763 aa5.43□□□□□ -1.54
PRPF4B-201ENST00000337659 PCLAFQ15004 111 aa5.43□□□□□ -1.54
PRPF4B-201ENST00000337659 TBCCQ15814 346 aa5.43□□□□□ -1.54
PRPF4B-201ENST00000337659 SMU1Q2TAY7 513 aa5.43□□□□□ -1.54
PRPF4B-201ENST00000337659 ALFQ53S48 1182 aa5.43□□□□□ -1.54
PRPF4B-201ENST00000337659 HECTD3Q5T447 861 aa5.43□□□□□ -1.54
PRPF4B-201ENST00000337659 TSTD2Q5T7W7 516 aa5.43□□□□□ -1.54
PRPF4B-201ENST00000337659 C1orf228Q6PIY5 440 aa5.43□□□□□ -1.54
PRPF4B-201ENST00000337659 CHSY3Q70JA7 882 aa5.43□□□□□ -1.54
PRPF4B-201ENST00000337659 TRIM42Q8IWZ5 723 aa5.43□□□□□ -1.54
PRPF4B-201ENST00000337659 GBP7Q8N8V2 638 aaPredicted RBP5.43□□□□□ -1.54
PRPF4B-201ENST00000337659 SPPL3Q8TCT6 385 aa5.43□□□□□ -1.54
PRPF4B-201ENST00000337659 TRABDQ9H4I3 376 aa5.43□□□□□ -1.54
PRPF4B-201ENST00000337659 MAGEE1Q9HCI5 957 aa5.43□□□□□ -1.54
PRPF4B-201ENST00000337659 ENAMQ9NRM1 1142 aa5.43□□□□□ -1.54
PRPF4B-201ENST00000337659 MARCH2Q9P0N8 246 aa5.43□□□□□ -1.54
PRPF4B-201ENST00000337659 ARNTLO00327 626 aa5.43□□□□□ -1.54
PRPF4B-201ENST00000337659 NRG2O14511 850 aaPredicted RBP5.43□□□□□ -1.54
PRPF4B-201ENST00000337659 TIMM44O43615 452 aa5.43□□□□□ -1.54
PRPF4B-201ENST00000337659 ATP9BO43861 1147 aa5.43□□□□□ -1.54
PRPF4B-201ENST00000337659 NPHS1O60500 1241 aa5.43□□□□□ -1.54
PRPF4B-201ENST00000337659 GLRA3O75311 464 aa5.43□□□□□ -1.54
PRPF4B-201ENST00000337659 RASSF9O75901 435 aa5.43□□□□□ -1.54
PRPF4B-201ENST00000337659 POLBP06746 335 aa5.43□□□□□ -1.54
PRPF4B-201ENST00000337659 CISD3P0C7P0 127 aa5.43□□□□□ -1.54
PRPF4B-201ENST00000337659 PCSK2P16519 638 aa5.43□□□□□ -1.54
PRPF4B-201ENST00000337659 NFKB1P19838 968 aa5.43□□□□□ -1.54
PRPF4B-201ENST00000337659 CDC25CP30307 473 aa5.43□□□□□ -1.54
PRPF4B-201ENST00000337659 EIF2DP41214 584 aaKnown RBP5.43□□□□□ -1.54
PRPF4B-201ENST00000337659 OR1G1P47890 313 aa5.43□□□□□ -1.54
PRPF4B-201ENST00000337659 GRIA4P48058 902 aa5.43□□□□□ -1.54
PRPF4B-201ENST00000337659 ATP4BP51164 291 aa5.43□□□□□ -1.54
PRPF4B-201ENST00000337659 GNGT1P63211 74 aa5.43□□□□□ -1.54
PRPF4B-201ENST00000337659 XIAPP98170 497 aa5.43□□□□□ -1.54
PRPF4B-201ENST00000337659 PFKPQ01813 784 aa5.43□□□□□ -1.54
PRPF4B-201ENST00000337659 XKR5Q6UX68 686 aa5.43□□□□□ -1.54
PRPF4B-201ENST00000337659 ARHGAP36Q6ZRI8 547 aa5.43□□□□□ -1.54
PRPF4B-201ENST00000337659 SRLQ86TD4 932 aa5.43□□□□□ -1.54
PRPF4B-201ENST00000337659 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.43□□□□□ -1.54
PRPF4B-201ENST00000337659 OR52K2Q8NGK3 314 aa5.43□□□□□ -1.54
PRPF4B-201ENST00000337659 HMCESQ96FZ2 354 aa5.43□□□□□ -1.54
PRPF4B-201ENST00000337659 MYO19Q96H55 970 aa5.43□□□□□ -1.54
PRPF4B-201ENST00000337659 SORT1Q99523 831 aa5.43□□□□□ -1.54
PRPF4B-201ENST00000337659 ABCB8Q9NUT2 735 aa5.43□□□□□ -1.54
PRPF4B-201ENST00000337659 POLR3BQ9NW08 1133 aaPredicted RBP5.43□□□□□ -1.54
PRPF4B-201ENST00000337659 CTNNAL1Q9UBT7 734 aa5.43□□□□□ -1.54
PRPF4B-201ENST00000337659 ZC3H7BQ9UGR2 993 aaKnown RBP5.43□□□□□ -1.54
PRPF4B-201ENST00000337659 SARDHQ9UL12 918 aa5.43□□□□□ -1.54
PRPF4B-201ENST00000337659 TIMM13Q9Y5L4 95 aaPredicted RBP5.43□□□□□ -1.54
PRPF4B-201ENST00000337659 CACNA1IQ9P0X4 2223 aa5.43□□□□□ -1.54
PRPF4B-201ENST00000337659 EXOC1LA0A1B0GW35 172 aa5.43□□□□□ -1.54
PRPF4B-201ENST00000337659 I3L4J1 428 aa5.43□□□□□ -1.54
PRPF4B-201ENST00000337659 MUSKO15146 869 aa5.43□□□□□ -1.54
PRPF4B-201ENST00000337659 PLIN3O60664 434 aa5.43□□□□□ -1.54
PRPF4B-201ENST00000337659 ARHGEF15O94989 841 aa5.43□□□□□ -1.54
PRPF4B-201ENST00000337659 PRR35P0CG20 571 aa5.43□□□□□ -1.54
PRPF4B-201ENST00000337659 FCARP24071 287 aa5.43□□□□□ -1.54
PRPF4B-201ENST00000337659 GRIK1P39086 918 aa5.43□□□□□ -1.54
PRPF4B-201ENST00000337659 AP1S1P61966 158 aa5.43□□□□□ -1.54
PRPF4B-201ENST00000337659 POU4F1Q01851 419 aa5.43□□□□□ -1.54
PRPF4B-201ENST00000337659 LBRQ14739 615 aaKnown RBP5.43□□□□□ -1.54
PRPF4B-201ENST00000337659 EFTUD2Q15029 972 aaKnown RBP eCLIP5.43□□□□□ -1.541e-6■□□□□ 8.7
PRPF4B-201ENST00000337659 TAF1AQ15573 450 aaPredicted RBP5.43□□□□□ -1.54
PRPF4B-201ENST00000337659 FXNQ16595 210 aa5.43□□□□□ -1.54
PRPF4B-201ENST00000337659 KAZNQ674X7 775 aa5.43□□□□□ -1.54
PRPF4B-201ENST00000337659 BNC2Q6ZN30 1099 aaPredicted RBP5.43□□□□□ -1.54
PRPF4B-201ENST00000337659 ATG14Q6ZNE5 492 aa5.43□□□□□ -1.54
PRPF4B-201ENST00000337659 ADAT2Q7Z6V5 191 aaKnown RBP5.43□□□□□ -1.54
PRPF4B-201ENST00000337659 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.43□□□□□ -1.54
PRPF4B-201ENST00000337659 ETFBKMTQ8IXQ9 262 aa5.43□□□□□ -1.54
PRPF4B-201ENST00000337659 UNC5BQ8IZJ1 945 aa5.43□□□□□ -1.54
PRPF4B-201ENST00000337659 STKLD1Q8NE28 680 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms