RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 C12orf42Q96LP6 360 aa8.33□□□□□ -1.08
HPS4-201ENST00000336873 TBATAQ96M53 351 aa8.33□□□□□ -1.08
HPS4-201ENST00000336873 CPNE1Q99829 537 aa8.33□□□□□ -1.08
HPS4-201ENST00000336873 C16orf70Q9BSU1 422 aa8.33□□□□□ -1.08
HPS4-201ENST00000336873 CD274Q9NZQ7 290 aa8.33□□□□□ -1.08
HPS4-201ENST00000336873 UXTQ9UBK9 157 aaPredicted RBP8.33□□□□□ -1.08
HPS4-201ENST00000336873 FBXO5Q9UKT4 447 aa8.33□□□□□ -1.08
HPS4-201ENST00000336873 PTGDR2Q9Y5Y4 395 aa8.33□□□□□ -1.08
HPS4-201ENST00000336873 E2F6O75461 281 aa8.33□□□□□ -1.08
HPS4-201ENST00000336873 TM7SF2O76062 418 aa8.33□□□□□ -1.08
HPS4-201ENST00000336873 PYGLP06737 847 aa8.33□□□□□ -1.08
HPS4-201ENST00000336873 LINC00032P0C843 101 aa8.33□□□□□ -1.08
HPS4-201ENST00000336873 SPATA31D3P0C874 917 aa8.33□□□□□ -1.08
HPS4-201ENST00000336873 YWHAQP27348 245 aa8.33□□□□□ -1.08
HPS4-201ENST00000336873 PIK3R1P27986 724 aa8.33□□□□□ -1.08
HPS4-201ENST00000336873 CCNFP41002 786 aa8.33□□□□□ -1.08
HPS4-201ENST00000336873 GABRB2P47870 512 aa8.33□□□□□ -1.08
HPS4-201ENST00000336873 CD151P48509 253 aa8.33□□□□□ -1.08
HPS4-201ENST00000336873 ECT2LQ008S8 904 aa8.33□□□□□ -1.08
HPS4-201ENST00000336873 FASTKQ14296 549 aaKnown RBP8.33□□□□□ -1.08
HPS4-201ENST00000336873 POM121L1PQ3SYA9 428 aa8.33□□□□□ -1.08
HPS4-201ENST00000336873 MTX3Q5HYI7 312 aa8.33□□□□□ -1.08
HPS4-201ENST00000336873 RBM20Q5T481 1227 aaKnown RBP8.33□□□□□ -1.08
HPS4-201ENST00000336873 LINGO4Q6UY18 593 aa8.33□□□□□ -1.08
HPS4-201ENST00000336873 SPATA31D4Q6ZUB0 917 aa8.33□□□□□ -1.08
HPS4-201ENST00000336873 ASRGL1Q7L266 308 aa8.33□□□□□ -1.08
HPS4-201ENST00000336873 TMEM110Q86TL2 294 aa8.33□□□□□ -1.08
HPS4-201ENST00000336873 TTC30BQ8N4P2 665 aa8.33□□□□□ -1.08
HPS4-201ENST00000336873 NIPA2Q8N8Q9 360 aa8.33□□□□□ -1.08
HPS4-201ENST00000336873 BRI3BPQ8WY22 251 aa8.33□□□□□ -1.08
HPS4-201ENST00000336873 HSFY1Q96LI6 401 aa8.33□□□□□ -1.08
HPS4-201ENST00000336873 ECSITQ9BQ95 431 aa8.33□□□□□ -1.08
HPS4-201ENST00000336873 TBCDQ9BTW9 1192 aa8.33□□□□□ -1.08
HPS4-201ENST00000336873 SLC4A5Q9BY07 1137 aa8.33□□□□□ -1.08
HPS4-201ENST00000336873 VTA1Q9NP79 307 aa8.33□□□□□ -1.08
HPS4-201ENST00000336873 RGS18Q9NS28 235 aa8.33□□□□□ -1.08
HPS4-201ENST00000336873 SUN2Q9UH99 717 aa8.33□□□□□ -1.08
HPS4-201ENST00000336873 PNMA8BQ9ULN7 279 aaPredicted RBP8.33□□□□□ -1.08
HPS4-201ENST00000336873 POMPQ9Y244 141 aa8.33□□□□□ -1.08
HPS4-201ENST00000336873 ACTL7AQ9Y615 435 aa8.33□□□□□ -1.08
HPS4-201ENST00000336873 NRCAMQ92823 1304 aa8.32□□□□□ -1.08
HPS4-201ENST00000336873 A0A0G2JLL6 359 aaPredicted RBP8.32□□□□□ -1.08
HPS4-201ENST00000336873 H0Y626 953 aa8.32□□□□□ -1.08
HPS4-201ENST00000336873 ADCY6O43306 1168 aa8.32□□□□□ -1.08
HPS4-201ENST00000336873 HNRNPCL1O60812 293 aaKnown RBP8.32□□□□□ -1.08
HPS4-201ENST00000336873 TRIM16O95361 564 aa8.32□□□□□ -1.08
HPS4-201ENST00000336873 CD1EP15812 388 aa8.32□□□□□ -1.08
HPS4-201ENST00000336873 CKMT2P17540 419 aa8.32□□□□□ -1.08
HPS4-201ENST00000336873 XRCC1P18887 633 aaPredicted RBP8.32□□□□□ -1.08
HPS4-201ENST00000336873 WNT3AP56704 352 aa8.32□□□□□ -1.08
HPS4-201ENST00000336873 CLDN10P78369 228 aa8.32□□□□□ -1.08
HPS4-201ENST00000336873 PPP1R3AQ16821 1122 aa8.32□□□□□ -1.08
HPS4-201ENST00000336873 CTXN3Q4LDR2 81 aa8.32□□□□□ -1.08
HPS4-201ENST00000336873 TEDDM1Q5T9Z0 273 aa8.32□□□□□ -1.08
HPS4-201ENST00000336873 GRTP1Q5TC63 336 aa8.32□□□□□ -1.08
HPS4-201ENST00000336873 PRRT2Q7Z6L0 340 aaPredicted RBP8.32□□□□□ -1.08
HPS4-201ENST00000336873 DHDDSQ86SQ9 333 aa8.32□□□□□ -1.08
HPS4-201ENST00000336873 SAPCD2Q86UD0 394 aa8.32□□□□□ -1.08
HPS4-201ENST00000336873 CACUL1Q86Y37 369 aa8.32□□□□□ -1.08
HPS4-201ENST00000336873 NRG4Q8WWG1 115 aa8.32□□□□□ -1.08
HPS4-201ENST00000336873 HIC2Q96JB3 615 aa8.32□□□□□ -1.08
HPS4-201ENST00000336873 SNX27Q96L92 541 aa8.32□□□□□ -1.08
HPS4-201ENST00000336873 SEMA3CQ99985 751 aa8.32□□□□□ -1.08
HPS4-201ENST00000336873 TBL1YQ9BQ87 522 aa8.32□□□□□ -1.08
HPS4-201ENST00000336873 FRMD8P1Q9BZ68 369 aaPredicted RBP8.32□□□□□ -1.08
HPS4-201ENST00000336873 ING2Q9H160 280 aa8.32□□□□□ -1.08
HPS4-201ENST00000336873 KCNK13Q9HB14 408 aa8.32□□□□□ -1.08
HPS4-201ENST00000336873 ZDHHC2Q9UIJ5 367 aa8.32□□□□□ -1.08
HPS4-201ENST00000336873 TIPRLO75663 272 aa8.32□□□□□ -1.08
HPS4-201ENST00000336873 SRP72O76094 671 aaKnown RBP8.32□□□□□ -1.08
HPS4-201ENST00000336873 CLIC3O95833 236 aa8.32□□□□□ -1.08
HPS4-201ENST00000336873 OAS1P00973 400 aaKnown RBP8.32□□□□□ -1.08
HPS4-201ENST00000336873 AHSGP02765 367 aa8.32□□□□□ -1.08
HPS4-201ENST00000336873 ODC1P11926 461 aa8.32□□□□□ -1.08
HPS4-201ENST00000336873 SKIV2L2P42285 1042 aaKnown RBP8.32□□□□□ -1.08
HPS4-201ENST00000336873 ALDH1A3P47895 512 aa8.32□□□□□ -1.08
HPS4-201ENST00000336873 CPT1AP50416 773 aa8.32□□□□□ -1.08
HPS4-201ENST00000336873 RPS6KA3P51812 740 aa8.32□□□□□ -1.08
HPS4-201ENST00000336873 CDC16Q13042 620 aa8.32□□□□□ -1.08
HPS4-201ENST00000336873 PPIL2Q13356 520 aa8.32□□□□□ -1.08
HPS4-201ENST00000336873 BLMHQ13867 455 aa8.32□□□□□ -1.08
HPS4-201ENST00000336873 ACBD5Q5T8D3 534 aaPredicted RBP8.32□□□□□ -1.08
HPS4-201ENST00000336873 CDCA2Q69YH5 1023 aaPredicted RBP8.32□□□□□ -1.08
HPS4-201ENST00000336873 ZBTB49Q6ZSB9 765 aa8.32□□□□□ -1.08
HPS4-201ENST00000336873 LPCAT1Q8NF37 534 aa8.32□□□□□ -1.08
HPS4-201ENST00000336873 DQX1Q8TE96 717 aaKnown RBP8.32□□□□□ -1.08
HPS4-201ENST00000336873 SMARCD1Q96GM5 515 aa8.32□□□□□ -1.08
HPS4-201ENST00000336873 CCDC138Q96M89 665 aa8.32□□□□□ -1.08
HPS4-201ENST00000336873 TMEM79Q9BSE2 394 aa8.32□□□□□ -1.08
HPS4-201ENST00000336873 FRMD8Q9BZ67 464 aaPredicted RBP8.32□□□□□ -1.08
HPS4-201ENST00000336873 BRD8Q9H0E9 1235 aa8.32□□□□□ -1.08
HPS4-201ENST00000336873 MIOSQ9NXC5 875 aa8.32□□□□□ -1.08
HPS4-201ENST00000336873 BCAP29Q9UHQ4 241 aa8.32□□□□□ -1.08
HPS4-201ENST00000336873 MID2Q9UJV3 735 aa8.32□□□□□ -1.08
HPS4-201ENST00000336873 F5P12259 2224 aa8.32□□□□□ -1.08
HPS4-201ENST00000336873 TRIP11Q15643 1979 aa8.32□□□□□ -1.08
HPS4-201ENST00000336873 SIPA1L1O43166 1804 aa8.32□□□□□ -1.08
HPS4-201ENST00000336873 A0A1W2PQH9 124 aa8.32□□□□□ -1.08
HPS4-201ENST00000336873 LRRC14BA6NHZ5 514 aa8.32□□□□□ -1.08
HPS4-201ENST00000336873 FFAR3O14843 346 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms