RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 CYLDQ9NQC7 956 aa15.18■□□□□ 0.02
C9orf47-201ENST00000334490 HAO1Q9UJM8 370 aa15.18■□□□□ 0.02
C9orf47-201ENST00000334490 SUFUQ9UMX1 484 aa15.18■□□□□ 0.02
C9orf47-201ENST00000334490 CLUHO75153 1309 aa15.18■□□□□ 0.02
C9orf47-201ENST00000334490 SLC25A14O95258 325 aaPredicted RBP15.17■□□□□ 0.02
C9orf47-201ENST00000334490 LTA4HP09960 611 aaKnown RBP15.17■□□□□ 0.02
C9orf47-201ENST00000334490 PTPN9P43378 593 aa15.17■□□□□ 0.02
C9orf47-201ENST00000334490 CLCN5P51795 746 aa15.17■□□□□ 0.02
C9orf47-201ENST00000334490 GJA9P57773 515 aa15.17■□□□□ 0.02
C9orf47-201ENST00000334490 POU5F1Q01860 360 aaKnown RBP15.17■□□□□ 0.02
C9orf47-201ENST00000334490 NOMO1Q15155 1222 aa15.17■□□□□ 0.02
C9orf47-201ENST00000334490 LDLRAD1Q5T700 205 aa15.17■□□□□ 0.02
C9orf47-201ENST00000334490 POTEHQ6S545 545 aa15.17■□□□□ 0.02
C9orf47-201ENST00000334490 SLC41A1Q8IVJ1 513 aa15.17■□□□□ 0.02
C9orf47-201ENST00000334490 OSCP1Q8WVF1 389 aa15.17■□□□□ 0.02
C9orf47-201ENST00000334490 CXorf40BQ96DE9 158 aa15.17■□□□□ 0.02
C9orf47-201ENST00000334490 COPS8Q99627 209 aa15.17■□□□□ 0.02
C9orf47-201ENST00000334490 AGO3Q9H9G7 860 aaKnown RBP15.17■□□□□ 0.02
C9orf47-201ENST00000334490 COQ4Q9Y3A0 265 aa15.17■□□□□ 0.02
C9orf47-201ENST00000334490 PCDHA11Q9Y5I1 949 aa15.17■□□□□ 0.02
C9orf47-201ENST00000334490 TLL2Q9Y6L7 1015 aa15.17■□□□□ 0.02
C9orf47-201ENST00000334490 LRP6O75581 1613 aa15.17■□□□□ 0.02
C9orf47-201ENST00000334490 SLC38A8A6NNN8 435 aa15.17■□□□□ 0.02
C9orf47-201ENST00000334490 LRIG2O94898 1065 aa15.17■□□□□ 0.02
C9orf47-201ENST00000334490 PWWP2AQ96N64 755 aa15.17■□□□□ 0.02
C9orf47-201ENST00000334490 VPS45Q9NRW7 570 aa15.17■□□□□ 0.02
C9orf47-201ENST00000334490 PIAS1O75925 651 aa15.17■□□□□ 0.02
C9orf47-201ENST00000334490 CTBP1Q13363 440 aa15.17■□□□□ 0.02
C9orf47-201ENST00000334490 GPM6BQ13491 265 aa15.17■□□□□ 0.02
C9orf47-201ENST00000334490 FAM45BPQ6NSW5 357 aa15.17■□□□□ 0.02
C9orf47-201ENST00000334490 KYAT3Q6YP21 454 aaKnown RBP15.17■□□□□ 0.02
C9orf47-201ENST00000334490 FAM45AQ8TCE6 357 aa15.17■□□□□ 0.02
C9orf47-201ENST00000334490 KCTD15Q96SI1 283 aaPredicted RBP15.17■□□□□ 0.02
C9orf47-201ENST00000334490 RAB23Q9ULC3 237 aa15.17■□□□□ 0.02
C9orf47-201ENST00000334490 TNPO3Q9Y5L0 923 aaKnown RBP15.17■□□□□ 0.02
C9orf47-201ENST00000334490 TOPAZ1Q8N9V7 1692 aa15.17■□□□□ 0.02
C9orf47-201ENST00000334490 A0A1B0GVM2 712 aa15.17■□□□□ 0.02
C9orf47-201ENST00000334490 TCAF2A6NFQ2 919 aa15.17■□□□□ 0.02
C9orf47-201ENST00000334490 YJEFN3A6XGL0 299 aa15.17■□□□□ 0.02
C9orf47-201ENST00000334490 E7ENQ6 273 aa15.17■□□□□ 0.02
C9orf47-201ENST00000334490 KPNA5O15131 536 aa15.17■□□□□ 0.02
C9orf47-201ENST00000334490 VNN1O95497 513 aa15.17■□□□□ 0.02
C9orf47-201ENST00000334490 ENPEPQ07075 957 aa15.17■□□□□ 0.02
C9orf47-201ENST00000334490 TRIM60Q495X7 471 aa15.17■□□□□ 0.02
C9orf47-201ENST00000334490 LINGO4Q6UY18 593 aa15.17■□□□□ 0.02
C9orf47-201ENST00000334490 PGM2Q96G03 612 aa15.17■□□□□ 0.02
C9orf47-201ENST00000334490 MYO19Q96H55 970 aa15.17■□□□□ 0.02
C9orf47-201ENST00000334490 CATSPER2Q96P56 530 aa15.17■□□□□ 0.02
C9orf47-201ENST00000334490 SEMA4BQ9NPR2 832 aaPredicted RBP15.17■□□□□ 0.02
C9orf47-201ENST00000334490 H2AFY2Q9P0M6 372 aaPredicted RBP15.17■□□□□ 0.02
C9orf47-201ENST00000334490 EVLQ9UI08 416 aaPredicted RBP15.17■□□□□ 0.02
C9orf47-201ENST00000334490 PTPRJQ12913 1337 aa15.17■□□□□ 0.02
C9orf47-201ENST00000334490 C10orf71Q711Q0 1435 aa15.16■□□□□ 0.02
C9orf47-201ENST00000334490 EIF4E1BA6NMX2 242 aaKnown RBP15.16■□□□□ 0.02
C9orf47-201ENST00000334490 INPP4BO15327 924 aa15.16■□□□□ 0.02
C9orf47-201ENST00000334490 MFSD11O43934 449 aa15.16■□□□□ 0.02
C9orf47-201ENST00000334490 EPHX1P07099 455 aa15.16■□□□□ 0.02
C9orf47-201ENST00000334490 JAM2P57087 298 aa15.16■□□□□ 0.02
C9orf47-201ENST00000334490 MED21Q13503 144 aa15.16■□□□□ 0.02
C9orf47-201ENST00000334490 ARHGAP17Q68EM7 881 aa15.16■□□□□ 0.02
C9orf47-201ENST00000334490 CHST9Q7L1S5 443 aa15.16■□□□□ 0.02
C9orf47-201ENST00000334490 EIF1ADQ8N9N8 165 aaKnown RBP15.16■□□□□ 0.02
C9orf47-201ENST00000334490 C2orf15Q8WU43 125 aaKnown RBP15.16■□□□□ 0.02
C9orf47-201ENST00000334490 AUTS2Q8WXX7 1259 aa15.16■□□□□ 0.02
C9orf47-201ENST00000334490 REPS1Q96D71 796 aa15.16■□□□□ 0.02
C9orf47-201ENST00000334490 LPIN3Q9BQK8 851 aa15.16■□□□□ 0.02
C9orf47-201ENST00000334490 HBS1LQ9Y450 684 aaKnown RBP15.16■□□□□ 0.02
C9orf47-201ENST00000334490 KCNU1A8MYU2 1149 aa15.16■□□□□ 0.02
C9orf47-201ENST00000334490 QSOX1O00391 747 aa15.16■□□□□ 0.02
C9orf47-201ENST00000334490 AVILO75366 819 aa15.16■□□□□ 0.02
C9orf47-201ENST00000334490 NAGLUP54802 743 aa15.16■□□□□ 0.02
C9orf47-201ENST00000334490 ACSM2AQ08AH3 577 aa15.16■□□□□ 0.02
C9orf47-201ENST00000334490 MAD2L1Q13257 205 aaPredicted RBP15.16■□□□□ 0.02
C9orf47-201ENST00000334490 ACSM2BQ68CK6 577 aa15.16■□□□□ 0.02
C9orf47-201ENST00000334490 FAM151BQ6UXP7 276 aa15.16■□□□□ 0.02
C9orf47-201ENST00000334490 C10orf53Q8N6V4 93 aa15.16■□□□□ 0.02
C9orf47-201ENST00000334490 PLD5Q8N7P1 536 aa15.16■□□□□ 0.02
C9orf47-201ENST00000334490 TSEN2Q8NCE0 465 aaKnown RBP15.16■□□□□ 0.02
C9orf47-201ENST00000334490 FLCNQ8NFG4 579 aa15.16■□□□□ 0.02
C9orf47-201ENST00000334490 SCAMP5Q8TAC9 235 aa15.16■□□□□ 0.02
C9orf47-201ENST00000334490 CYGBQ8WWM9 190 aa15.16■□□□□ 0.02
C9orf47-201ENST00000334490 RIPOR3Q96MK2 946 aa15.16■□□□□ 0.02
C9orf47-201ENST00000334490 SH3GL1Q99961 368 aa15.16■□□□□ 0.02
C9orf47-201ENST00000334490 DUS2Q9NX74 493 aaKnown RBP15.16■□□□□ 0.02
C9orf47-201ENST00000334490 AKAP7Q9P0M2 348 aaPredicted RBP15.16■□□□□ 0.02
C9orf47-201ENST00000334490 EFR3BQ9Y2G0 817 aa15.16■□□□□ 0.02
C9orf47-201ENST00000334490 SNX8Q9Y5X2 465 aa15.16■□□□□ 0.02
C9orf47-201ENST00000334490 STBD1O95210 358 aa15.16■□□□□ 0.02
C9orf47-201ENST00000334490 ASPAP45381 313 aa15.16■□□□□ 0.02
C9orf47-201ENST00000334490 DRG2P55039 364 aaKnown RBP15.16■□□□□ 0.02
C9orf47-201ENST00000334490 FAXDC2Q96IV6 333 aa15.16■□□□□ 0.02
C9orf47-201ENST00000334490 SYBUQ9NX95 663 aa15.16■□□□□ 0.02
C9orf47-201ENST00000334490 H3BQF6 201 aa15.15■□□□□ 0.02
C9orf47-201ENST00000334490 BNC2Q6ZN30 1099 aaPredicted RBP15.15■□□□□ 0.02
C9orf47-201ENST00000334490 PRR23CQ6ZRP0 262 aa15.15■□□□□ 0.02
C9orf47-201ENST00000334490 C11orf74Q86VG3 221 aa15.15■□□□□ 0.02
C9orf47-201ENST00000334490 OR7D4Q8NG98 312 aa15.15■□□□□ 0.02
C9orf47-201ENST00000334490 TRIB2Q92519 343 aa15.15■□□□□ 0.02
C9orf47-201ENST00000334490 FAM120BQ96EK7 910 aaKnown RBP15.15■□□□□ 0.02
C9orf47-201ENST00000334490 VTI1BQ9UEU0 232 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms