RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 UPB1Q9UBR1 384 aa10.44□□□□□ -0.74
SPTBN1-201ENST00000333896 PRKAB1Q9Y478 270 aa10.44□□□□□ -0.74
SPTBN1-201ENST00000333896 WRBO00258 174 aa10.44□□□□□ -0.74
SPTBN1-201ENST00000333896 IL2P60568 153 aa10.44□□□□□ -0.74
SPTBN1-201ENST00000333896 MYBPC1Q00872 1141 aa10.44□□□□□ -0.74
SPTBN1-201ENST00000333896 BIKQ13323 160 aa10.44□□□□□ -0.74
SPTBN1-201ENST00000333896 PAGE2Q7Z2X7 111 aa10.44□□□□□ -0.74
SPTBN1-201ENST00000333896 LRRN4CLQ8ND94 238 aa10.44□□□□□ -0.74
SPTBN1-201ENST00000333896 SCUBE2Q9NQ36 999 aa10.44□□□□□ -0.74
SPTBN1-201ENST00000333896 RNF17Q9BXT8 1623 aaKnown RBP10.43□□□□□ -0.74
SPTBN1-201ENST00000333896 UGT2B4P06133 528 aa10.43□□□□□ -0.74
SPTBN1-201ENST00000333896 ETS1P14921 441 aa10.43□□□□□ -0.74
SPTBN1-201ENST00000333896 PTGER2P43116 358 aa10.43□□□□□ -0.74
SPTBN1-201ENST00000333896 ELP6Q0PNE2 266 aa10.43□□□□□ -0.74
SPTBN1-201ENST00000333896 CLCA4Q14CN2 919 aa10.43□□□□□ -0.74
SPTBN1-201ENST00000333896 RNASE12Q5GAN4 147 aaKnown RBP10.43□□□□□ -0.74
SPTBN1-201ENST00000333896 RBM48Q5RL73 367 aaKnown RBP10.43□□□□□ -0.74
SPTBN1-201ENST00000333896 SMIM5Q71RC9 77 aa10.43□□□□□ -0.74
SPTBN1-201ENST00000333896 INO80EQ8NBZ0 244 aaPredicted RBP10.43□□□□□ -0.74
SPTBN1-201ENST00000333896 SEMA4DQ92854 862 aa10.43□□□□□ -0.74
SPTBN1-201ENST00000333896 DYRK1BQ9Y463 629 aa10.43□□□□□ -0.74
SPTBN1-201ENST00000333896 NCAM2O15394 837 aa10.43□□□□□ -0.74
SPTBN1-201ENST00000333896 DBTP11182 482 aaKnown RBP10.43□□□□□ -0.74
SPTBN1-201ENST00000333896 COX4I1P13073 169 aa10.43□□□□□ -0.74
SPTBN1-201ENST00000333896 GRIA3P42263 894 aa10.43□□□□□ -0.74
SPTBN1-201ENST00000333896 CD97P48960 835 aa10.43□□□□□ -0.74
SPTBN1-201ENST00000333896 CCR4P51679 360 aa10.43□□□□□ -0.74
SPTBN1-201ENST00000333896 IL18Q14116 193 aa10.43□□□□□ -0.74
SPTBN1-201ENST00000333896 GALNT3Q14435 633 aa10.43□□□□□ -0.74
SPTBN1-201ENST00000333896 PACRGLQ8N7B6 248 aa10.43□□□□□ -0.74
SPTBN1-201ENST00000333896 BPIFB6Q8NFQ5 453 aa10.43□□□□□ -0.74
SPTBN1-201ENST00000333896 ZNF302Q9NR11 478 aa10.43□□□□□ -0.74
SPTBN1-201ENST00000333896 C2orf71A6NGG8 1288 aa10.43□□□□□ -0.74
SPTBN1-201ENST00000333896 GABBR2O75899 941 aa10.43□□□□□ -0.74
SPTBN1-201ENST00000333896 IL18RAPO95256 599 aa10.43□□□□□ -0.74
SPTBN1-201ENST00000333896 STAT3P40763 770 aa10.43□□□□□ -0.74
SPTBN1-201ENST00000333896 CCNYL2Q5T2Q4 361 aa10.43□□□□□ -0.74
SPTBN1-201ENST00000333896 FAM171BQ6P995 826 aa10.43□□□□□ -0.74
SPTBN1-201ENST00000333896 PIGWQ7Z7B1 504 aa10.43□□□□□ -0.74
SPTBN1-201ENST00000333896 C15orf40Q8WUR7 153 aa10.43□□□□□ -0.74
SPTBN1-201ENST00000333896 CGREF1Q99674 301 aa10.43□□□□□ -0.74
SPTBN1-201ENST00000333896 MRPL9Q9BYD2 267 aaKnown RBP10.43□□□□□ -0.74
SPTBN1-201ENST00000333896 ZNF350Q9GZX5 532 aa10.43□□□□□ -0.74
SPTBN1-201ENST00000333896 CRISPLD1Q9H336 500 aa10.43□□□□□ -0.74
SPTBN1-201ENST00000333896 GNEQ9Y223 722 aaKnown RBP10.43□□□□□ -0.74
SPTBN1-201ENST00000333896 MTF2Q9Y483 593 aaPredicted RBP10.43□□□□□ -0.74
SPTBN1-201ENST00000333896 UNC13BO14795 1591 aa10.43□□□□□ -0.74
SPTBN1-201ENST00000333896 MAZP56270 477 aaKnown RBP10.43□□□□□ -0.74
SPTBN1-201ENST00000333896 DCAF6Q58WW2 860 aa10.43□□□□□ -0.74
SPTBN1-201ENST00000333896 RDH11Q8TC12 318 aa10.43□□□□□ -0.74
SPTBN1-201ENST00000333896 KANSL2Q9H9L4 492 aa10.43□□□□□ -0.74
SPTBN1-201ENST00000333896 ADPRHL2Q9NX46 363 aa10.43□□□□□ -0.74
SPTBN1-201ENST00000333896 MROH2AA6NES4 1674 aa10.43□□□□□ -0.74
SPTBN1-201ENST00000333896 USP17L3A6NCW0 530 aa10.43□□□□□ -0.74
SPTBN1-201ENST00000333896 USP17L4A6NCW7 530 aa10.43□□□□□ -0.74
SPTBN1-201ENST00000333896 GARTP22102 1010 aa10.43□□□□□ -0.74
SPTBN1-201ENST00000333896 ADORA1P30542 326 aa10.43□□□□□ -0.74
SPTBN1-201ENST00000333896 MARSP56192 900 aaKnown RBP10.43□□□□□ -0.74
SPTBN1-201ENST00000333896 KCNV1Q6PIU1 500 aa10.43□□□□□ -0.74
SPTBN1-201ENST00000333896 USP17L1Q7RTZ2 530 aa10.43□□□□□ -0.74
SPTBN1-201ENST00000333896 PHACTR4Q8IZ21 702 aa10.43□□□□□ -0.74
SPTBN1-201ENST00000333896 HNRNPABQ99729 332 aaKnown RBP10.43□□□□□ -0.74
SPTBN1-201ENST00000333896 PTPRHQ9HD43 1115 aa10.43□□□□□ -0.74
SPTBN1-201ENST00000333896 KDM4BO94953 1096 aa10.43□□□□□ -0.74
SPTBN1-201ENST00000333896 SPTBP11277 2137 aa10.43□□□□□ -0.74
SPTBN1-201ENST00000333896 RPA3P35244 121 aaPredicted RBP10.43□□□□□ -0.74
SPTBN1-201ENST00000333896 HKDC1Q2TB90 917 aa10.43□□□□□ -0.74
SPTBN1-201ENST00000333896 LRRC69Q6ZNQ3 347 aa10.43□□□□□ -0.74
SPTBN1-201ENST00000333896 ATP6V1C2Q8NEY4 427 aa10.43□□□□□ -0.74
SPTBN1-201ENST00000333896 OR2L5Q8NG80 312 aa10.43□□□□□ -0.74
SPTBN1-201ENST00000333896 TBC1D15Q8TC07 691 aa10.43□□□□□ -0.74
SPTBN1-201ENST00000333896 ATL1Q8WXF7 558 aa10.43□□□□□ -0.74
SPTBN1-201ENST00000333896 MAFIPQ8WZ33 124 aa10.43□□□□□ -0.74
SPTBN1-201ENST00000333896 TLR10Q9BXR5 811 aa10.43□□□□□ -0.74
SPTBN1-201ENST00000333896 NMT1P30419 496 aaKnown RBP10.43□□□□□ -0.74
SPTBN1-201ENST00000333896 SULT2A1Q06520 285 aa10.43□□□□□ -0.74
SPTBN1-201ENST00000333896 PLD1Q13393 1074 aa10.43□□□□□ -0.74
SPTBN1-201ENST00000333896 KCTD15Q96SI1 283 aaPredicted RBP10.43□□□□□ -0.74
SPTBN1-201ENST00000333896 HOPXQ9BPY8 73 aaPredicted RBP10.43□□□□□ -0.74
SPTBN1-201ENST00000333896 CCDC86Q9H6F5 360 aaKnown RBP10.43□□□□□ -0.74
SPTBN1-201ENST00000333896 HPF1Q9NWY4 346 aa10.43□□□□□ -0.74
SPTBN1-201ENST00000333896 TIMM8BQ9Y5J9 83 aaPredicted RBP10.43□□□□□ -0.74
SPTBN1-201ENST00000333896 PMPCBO75439 489 aa10.42□□□□□ -0.74
SPTBN1-201ENST00000333896 CACNB3P54284 484 aa10.42□□□□□ -0.74
SPTBN1-201ENST00000333896 PITPNAQ00169 270 aa10.42□□□□□ -0.74
SPTBN1-201ENST00000333896 ZNF45Q02386 682 aa10.42□□□□□ -0.74
SPTBN1-201ENST00000333896 NR6A1Q15406 480 aa10.42□□□□□ -0.74
SPTBN1-201ENST00000333896 PLA2G4FQ68DD2 849 aa10.42□□□□□ -0.74
SPTBN1-201ENST00000333896 PAK6Q9NQU5 681 aaPredicted RBP10.42□□□□□ -0.74
SPTBN1-201ENST00000333896 DRG1Q9Y295 367 aaKnown RBP10.42□□□□□ -0.74
SPTBN1-201ENST00000333896 GRIP1Q9Y3R0 1128 aa10.42□□□□□ -0.74
SPTBN1-201ENST00000333896 GMPPBQ9Y5P6 360 aa10.42□□□□□ -0.74
SPTBN1-201ENST00000333896 ZNF701M0R085 212 aaPredicted RBP10.42□□□□□ -0.74
SPTBN1-201ENST00000333896 CHST10O43529 356 aa10.42□□□□□ -0.74
SPTBN1-201ENST00000333896 IFI30P13284 250 aa10.42□□□□□ -0.74
SPTBN1-201ENST00000333896 ERVK-9P63128 1117 aa10.42□□□□□ -0.74
SPTBN1-201ENST00000333896 NKX1-1Q15270 411 aaPredicted RBP10.42□□□□□ -0.74
SPTBN1-201ENST00000333896 RHEBQ15382 184 aa10.42□□□□□ -0.74
SPTBN1-201ENST00000333896 MTX3Q5HYI7 312 aa10.42□□□□□ -0.74
SPTBN1-201ENST00000333896 C2orf40Q9H1Z8 148 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms