RNA–Protein interactions for RNA: ENST00000332345.10

LIMS1-201, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-201ENST00000332345 RENBPP51606 427 aa14.23□□□□□ -0.13
LIMS1-201ENST00000332345 CCR5P51681 352 aa14.23□□□□□ -0.13
LIMS1-201ENST00000332345 METAP1P53582 386 aa14.23□□□□□ -0.13
LIMS1-201ENST00000332345 ADPRHP54922 357 aa14.23□□□□□ -0.13
LIMS1-201ENST00000332345 NAP1L1P55209 391 aaKnown RBP14.23□□□□□ -0.13
LIMS1-201ENST00000332345 IRX4P78413 519 aa14.23□□□□□ -0.13
LIMS1-201ENST00000332345 GRM3Q14832 879 aa14.23□□□□□ -0.13
LIMS1-201ENST00000332345 KIAA0895LQ68EN5 471 aa14.23□□□□□ -0.13
LIMS1-201ENST00000332345 FBXL19Q6PCT2 694 aa14.23□□□□□ -0.13
LIMS1-201ENST00000332345 ERN2Q76MJ5 926 aaKnown RBP14.23□□□□□ -0.13
LIMS1-201ENST00000332345 KIAA1328Q86T90 577 aa14.23□□□□□ -0.13
LIMS1-201ENST00000332345 VSIG1Q86XK7 387 aa14.23□□□□□ -0.13
LIMS1-201ENST00000332345 PCDH19Q8TAB3 1148 aa14.23□□□□□ -0.13
LIMS1-201ENST00000332345 NSMCE1Q8WV22 266 aa14.23□□□□□ -0.13
LIMS1-201ENST00000332345 SNX19Q92543 992 aa14.23□□□□□ -0.13
LIMS1-201ENST00000332345 RAPGEF5Q92565 580 aa14.23□□□□□ -0.13
LIMS1-201ENST00000332345 FAM131CQ96AQ9 280 aa14.23□□□□□ -0.13
LIMS1-201ENST00000332345 BIRC7Q96CA5 298 aa14.23□□□□□ -0.13
LIMS1-201ENST00000332345 ZNF599Q96NL3 588 aa14.23□□□□□ -0.13
LIMS1-201ENST00000332345 EIF2B4Q9UI10 523 aaKnown RBP14.23□□□□□ -0.13
LIMS1-201ENST00000332345 MFHAS1Q9Y4C4 1052 aa14.23□□□□□ -0.13
LIMS1-201ENST00000332345 ATXN2Q99700 1313 aaKnown RBP14.22□□□□□ -0.13
LIMS1-201ENST00000332345 LRRD1A4D1F6 860 aa14.22□□□□□ -0.13
LIMS1-201ENST00000332345 BTNL10A8MVZ5 291 aa14.22□□□□□ -0.13
LIMS1-201ENST00000332345 ZNF487B1APH4 448 aa14.22□□□□□ -0.13
LIMS1-201ENST00000332345 PATE3B3GLJ2 98 aa14.22□□□□□ -0.13
LIMS1-201ENST00000332345 PLK4O00444 970 aa14.22□□□□□ -0.13
LIMS1-201ENST00000332345 BCAT2O15382 392 aaPredicted RBP14.22□□□□□ -0.13
LIMS1-201ENST00000332345 PLRG1O43660 514 aaKnown RBP14.22□□□□□ -0.13
LIMS1-201ENST00000332345 SYPP08247 313 aa14.22□□□□□ -0.13
LIMS1-201ENST00000332345 TNNT1P13805 278 aa14.22□□□□□ -0.13
LIMS1-201ENST00000332345 ITGB7P26010 798 aa14.22□□□□□ -0.13
LIMS1-201ENST00000332345 CD27P26842 260 aa14.22□□□□□ -0.13
LIMS1-201ENST00000332345 VAV2P52735 878 aa14.22□□□□□ -0.13
LIMS1-201ENST00000332345 NSUN2Q08J23 767 aaKnown RBP eCLIP14.22□□□□□ -0.13
LIMS1-201ENST00000332345 PAFAH1B3Q15102 231 aaKnown RBP14.22□□□□□ -0.13
LIMS1-201ENST00000332345 ZNF805Q5CZA5 627 aa14.22□□□□□ -0.13
LIMS1-201ENST00000332345 ATXN7L2Q5T6C5 722 aaPredicted RBP14.22□□□□□ -0.13
LIMS1-201ENST00000332345 AGBL4Q5VU57 503 aa14.22□□□□□ -0.13
LIMS1-201ENST00000332345 NEK5Q6P3R8 708 aa14.22□□□□□ -0.13
LIMS1-201ENST00000332345 GDPD4Q6W3E5 623 aa14.22□□□□□ -0.13
LIMS1-201ENST00000332345 DAAM2Q86T65 1068 aa14.22□□□□□ -0.13
LIMS1-201ENST00000332345 TMEM139Q8IV31 216 aa14.22□□□□□ -0.13
LIMS1-201ENST00000332345 BBS5Q8N3I7 341 aa14.22□□□□□ -0.13
LIMS1-201ENST00000332345 ATPAF2Q8N5M1 289 aa14.22□□□□□ -0.13
LIMS1-201ENST00000332345 NETO2Q8NC67 525 aa14.22□□□□□ -0.13
LIMS1-201ENST00000332345 OR6K2Q8NGY2 324 aa14.22□□□□□ -0.13
LIMS1-201ENST00000332345 ARRDC3Q96B67 414 aa14.22□□□□□ -0.13
LIMS1-201ENST00000332345 FAF2Q96CS3 445 aa14.22□□□□□ -0.13
LIMS1-201ENST00000332345 RNF157Q96PX1 679 aa14.22□□□□□ -0.13
LIMS1-201ENST00000332345 CINPQ9BW66 212 aaPredicted RBP14.22□□□□□ -0.13
LIMS1-201ENST00000332345 CPEB1Q9BZB8 566 aaKnown RBP14.22□□□□□ -0.13
LIMS1-201ENST00000332345 PREBQ9HCU5 417 aa14.22□□□□□ -0.13
LIMS1-201ENST00000332345 KLHL11Q9NVR0 708 aa14.22□□□□□ -0.13
LIMS1-201ENST00000332345 TFR2Q9UP52 801 aa14.22□□□□□ -0.13
LIMS1-201ENST00000332345 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.22□□□□□ -0.13
LIMS1-201ENST00000332345 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.21□□□□□ -0.13
LIMS1-201ENST00000332345 PJA2O43164 708 aa14.21□□□□□ -0.13
LIMS1-201ENST00000332345 PSTPIP1O43586 416 aa14.21□□□□□ -0.13
LIMS1-201ENST00000332345 MAFKO60675 156 aa14.21□□□□□ -0.13
LIMS1-201ENST00000332345 ZFXP17010 805 aaPredicted RBP14.21□□□□□ -0.13
LIMS1-201ENST00000332345 MX2P20592 715 aa14.21□□□□□ -0.13
LIMS1-201ENST00000332345 NUDT1P36639 197 aa14.21□□□□□ -0.13
LIMS1-201ENST00000332345 CSNK1DP48730 415 aa14.21□□□□□ -0.13
LIMS1-201ENST00000332345 NEK3P51956 506 aa14.21□□□□□ -0.13
LIMS1-201ENST00000332345 KIF5AQ12840 1032 aa14.21□□□□□ -0.13
LIMS1-201ENST00000332345 LBRQ14739 615 aaKnown RBP14.21□□□□□ -0.13
LIMS1-201ENST00000332345 IFI16Q16666 785 aaKnown RBP14.21□□□□□ -0.13
LIMS1-201ENST00000332345 PIP5KL1Q5T9C9 394 aa14.21□□□□□ -0.13
LIMS1-201ENST00000332345 TCEAL6Q6IPX3 200 aa14.21□□□□□ -0.13
LIMS1-201ENST00000332345 C11orf63Q6NUN7 778 aa14.21□□□□□ -0.13
LIMS1-201ENST00000332345 ARHGAP36Q6ZRI8 547 aa14.21□□□□□ -0.13
LIMS1-201ENST00000332345 PRPF39Q86UA1 669 aaKnown RBP14.21□□□□□ -0.13
LIMS1-201ENST00000332345 TP53INP2Q8IXH6 220 aa14.21□□□□□ -0.13
LIMS1-201ENST00000332345 ACRBPQ8NEB7 543 aa14.21□□□□□ -0.13
LIMS1-201ENST00000332345 TPCN2Q8NHX9 752 aa14.21□□□□□ -0.13
LIMS1-201ENST00000332345 NETO1Q8TDF5 533 aa14.21□□□□□ -0.13
LIMS1-201ENST00000332345 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.21□□□□□ -0.13
LIMS1-201ENST00000332345 TCEAL3Q969E4 200 aa14.21□□□□□ -0.13
LIMS1-201ENST00000332345 RAB7BQ96AH8 199 aa14.21□□□□□ -0.13
LIMS1-201ENST00000332345 LHX3Q9UBR4 397 aa14.21□□□□□ -0.13
LIMS1-201ENST00000332345 SEPT3Q9UH03 358 aa14.21□□□□□ -0.13
LIMS1-201ENST00000332345 CDV3Q9UKY7 258 aaKnown RBP14.21□□□□□ -0.13
LIMS1-201ENST00000332345 REXO2Q9Y3B8 237 aaKnown RBP14.21□□□□□ -0.13
LIMS1-201ENST00000332345 HYOU1Q9Y4L1 999 aa14.21□□□□□ -0.13
LIMS1-201ENST00000332345 DUSP10Q9Y6W6 482 aa14.21□□□□□ -0.13
LIMS1-201ENST00000332345 SHROOM3Q8TF72 1996 aa14.21□□□□□ -0.13
LIMS1-201ENST00000332345 A0A1W2PPC4 97 aa14.2□□□□□ -0.14
LIMS1-201ENST00000332345 RCCD1A6NED2 376 aa14.2□□□□□ -0.14
LIMS1-201ENST00000332345 GOLGA6L3A6NEY3 463 aa14.2□□□□□ -0.14
LIMS1-201ENST00000332345 C16orf96A6NNT2 1141 aa14.2□□□□□ -0.14
LIMS1-201ENST00000332345 GDF9O60383 454 aa14.2□□□□□ -0.14
LIMS1-201ENST00000332345 KRT1P04264 644 aa14.2□□□□□ -0.14
LIMS1-201ENST00000332345 UGT2B4P06133 528 aa14.2□□□□□ -0.14
LIMS1-201ENST00000332345 IGHV4-34P06331 123 aa14.2□□□□□ -0.14
LIMS1-201ENST00000332345 ADRB3P13945 408 aa14.2□□□□□ -0.14
LIMS1-201ENST00000332345 GKP32189 559 aa14.2□□□□□ -0.14
LIMS1-201ENST00000332345 AFF3P51826 1226 aaKnown RBP14.2□□□□□ -0.14
LIMS1-201ENST00000332345 LIMK1P53667 647 aa14.2□□□□□ -0.14
LIMS1-201ENST00000332345 ATXN3P54252 364 aaPredicted RBP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms