RNA–Protein interactions for RNA: ENST00000331433.4

CLCNKA-201, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,475 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-201ENST00000331433 E9PBE3 544 aa15.04■□□□□ -0
CLCNKA-201ENST00000331433 KLHL41O60662 606 aa15.04■□□□□ -0
CLCNKA-201ENST00000331433 TM7SF2O76062 418 aa15.04■□□□□ -0
CLCNKA-201ENST00000331433 KLHL2O95198 593 aa15.04■□□□□ -0
CLCNKA-201ENST00000331433 PSMG1O95456 288 aa15.04■□□□□ -0
CLCNKA-201ENST00000331433 MPSTP25325 297 aa15.04■□□□□ -0
CLCNKA-201ENST00000331433 CPOXP36551 454 aa15.04■□□□□ -0
CLCNKA-201ENST00000331433 GATMP50440 423 aa15.04■□□□□ -0
CLCNKA-201ENST00000331433 SP3Q02447 781 aa15.04■□□□□ -0
CLCNKA-201ENST00000331433 SLC12A1Q13621 1099 aa15.04■□□□□ -0
CLCNKA-201ENST00000331433 TAF11Q15544 211 aa15.04■□□□□ -0
CLCNKA-201ENST00000331433 UGP2Q16851 508 aa15.04■□□□□ -0
CLCNKA-201ENST00000331433 DNAL1Q4LDG9 190 aa15.04■□□□□ -0
CLCNKA-201ENST00000331433 KDELC1Q6UW63 502 aa15.04■□□□□ -0
CLCNKA-201ENST00000331433 CIR1Q86X95 450 aaPredicted RBP15.04■□□□□ -0
CLCNKA-201ENST00000331433 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.04■□□□□ -0
CLCNKA-201ENST00000331433 UMODL1-AS1Q8N2C9 162 aa15.04■□□□□ -0
CLCNKA-201ENST00000331433 PHTF2Q8N3S3 785 aa15.04■□□□□ -0
CLCNKA-201ENST00000331433 FSTL5Q8N475 847 aaPredicted RBP15.04■□□□□ -0
CLCNKA-201ENST00000331433 GPATCH11Q8N954 259 aa15.04■□□□□ -0
CLCNKA-201ENST00000331433 SREK1Q8WXA9 508 aaKnown RBP15.04■□□□□ -0
CLCNKA-201ENST00000331433 FBXO32Q969P5 355 aa15.04■□□□□ -0
CLCNKA-201ENST00000331433 TSNARE1Q96NA8 513 aa15.04■□□□□ -0
CLCNKA-201ENST00000331433 GPR62Q9BZJ7 368 aa15.04■□□□□ -0
CLCNKA-201ENST00000331433 ZYG11BQ9C0D3 744 aa15.04■□□□□ -0
CLCNKA-201ENST00000331433 FAM96AQ9H5X1 160 aa15.04■□□□□ -0
CLCNKA-201ENST00000331433 PRDM5Q9NQX1 630 aaPredicted RBP15.04■□□□□ -0
CLCNKA-201ENST00000331433 ANKRD6Q9Y2G4 727 aa15.04■□□□□ -0
CLCNKA-201ENST00000331433 PLXNA3P51805 1871 aa15.04■□□□□ -0
CLCNKA-201ENST00000331433 TMEM114B3SHH9 223 aa15.04■□□□□ -0
CLCNKA-201ENST00000331433 SLC2A3P11169 496 aa15.04■□□□□ -0
CLCNKA-201ENST00000331433 CDC25CP30307 473 aa15.04■□□□□ -0
CLCNKA-201ENST00000331433 CD86P42081 329 aa15.04■□□□□ -0
CLCNKA-201ENST00000331433 GRIA4P48058 902 aa15.04■□□□□ -0
CLCNKA-201ENST00000331433 IHHQ14623 411 aa15.04■□□□□ -0
CLCNKA-201ENST00000331433 CCDC6Q16204 474 aa15.04■□□□□ -0
CLCNKA-201ENST00000331433 RAP1GAP2Q684P5 730 aa15.04■□□□□ -0
CLCNKA-201ENST00000331433 ZYG11AQ6WRX3 759 aa15.04■□□□□ -0
CLCNKA-201ENST00000331433 STMN2Q93045 179 aa15.04■□□□□ -0
CLCNKA-201ENST00000331433 IGSF8Q969P0 613 aa15.04■□□□□ -0
CLCNKA-201ENST00000331433 PSMG2Q969U7 264 aa15.04■□□□□ -0
CLCNKA-201ENST00000331433 PPP1R36Q96LQ0 422 aa15.04■□□□□ -0
CLCNKA-201ENST00000331433 SLC25A51Q9H1U9 297 aa15.04■□□□□ -0
CLCNKA-201ENST00000331433 SLC7A8Q9UHI5 535 aa15.04■□□□□ -0
CLCNKA-201ENST00000331433 ACOT9Q9Y305 439 aa15.04■□□□□ -0
CLCNKA-201ENST00000331433 DCXO43602 365 aa15.03■□□□□ -0
CLCNKA-201ENST00000331433 AOC2O75106 756 aa15.03■□□□□ -0
CLCNKA-201ENST00000331433 RHOQP17081 205 aa15.03■□□□□ -0
CLCNKA-201ENST00000331433 CLNS1AP54105 237 aaKnown RBP15.03■□□□□ -0
CLCNKA-201ENST00000331433 RAB10P61026 200 aa15.03■□□□□ -0
CLCNKA-201ENST00000331433 DSC2Q02487 901 aa15.03■□□□□ -0
CLCNKA-201ENST00000331433 DLG1Q12959 904 aa15.03■□□□□ -0
CLCNKA-201ENST00000331433 PEX6Q13608 980 aa15.03■□□□□ -0
CLCNKA-201ENST00000331433 ZNF280DQ6N043 979 aa15.03■□□□□ -0
CLCNKA-201ENST00000331433 FBXL22Q6P050 247 aa15.03■□□□□ -0
CLCNKA-201ENST00000331433 EPGNQ6UW88 154 aa15.03■□□□□ -0
CLCNKA-201ENST00000331433 NXNL1Q96CM4 212 aa15.03■□□□□ -0
CLCNKA-201ENST00000331433 ELMO2Q96JJ3 720 aa15.03■□□□□ -0
CLCNKA-201ENST00000331433 CRISPLD1Q9H336 500 aa15.03■□□□□ -0
CLCNKA-201ENST00000331433 XPR1Q9UBH6 696 aa15.03■□□□□ -0
CLCNKA-201ENST00000331433 GOLGA8QA0A0J9YX86 632 aa15.03■□□□□ -0
CLCNKA-201ENST00000331433 GOLGA8OA6NCC3 632 aa15.03■□□□□ -0
CLCNKA-201ENST00000331433 GOLGA8NF8WBI6 632 aa15.03■□□□□ -0
CLCNKA-201ENST00000331433 TBX10O75333 385 aa15.03■□□□□ -0
CLCNKA-201ENST00000331433 ALDH1A1P00352 501 aa15.03■□□□□ -0
CLCNKA-201ENST00000331433 APOA4P06727 396 aa15.03■□□□□ -0
CLCNKA-201ENST00000331433 STMN1P16949 149 aa15.03■□□□□ -0
CLCNKA-201ENST00000331433 YWHAQP27348 245 aa15.03■□□□□ -0
CLCNKA-201ENST00000331433 RENBPP51606 427 aa15.03■□□□□ -0
CLCNKA-201ENST00000331433 NAGLUP54802 743 aa15.03■□□□□ -0
CLCNKA-201ENST00000331433 TAS2R39P59534 338 aa15.03■□□□□ -0
CLCNKA-201ENST00000331433 TAF10Q12962 218 aa15.03■□□□□ -0
CLCNKA-201ENST00000331433 HNRNPDQ14103 355 aaKnown RBP15.03■□□□□ -0
CLCNKA-201ENST00000331433 ZNF789Q5FWF6 425 aa15.03■□□□□ -0
CLCNKA-201ENST00000331433 C10orf120Q5SQS8 335 aa15.03■□□□□ -0
CLCNKA-201ENST00000331433 MAP3K21Q5TCX8 1036 aa15.03■□□□□ -0
CLCNKA-201ENST00000331433 RASIP1Q5U651 963 aa15.03■□□□□ -0
CLCNKA-201ENST00000331433 LIPMQ5VYY2 423 aa15.03■□□□□ -0
CLCNKA-201ENST00000331433 LRRC8EQ6NSJ5 796 aa15.03■□□□□ -0
CLCNKA-201ENST00000331433 RIPOR1Q6ZS17 1223 aa15.03■□□□□ -0
CLCNKA-201ENST00000331433 LRRC49Q8IUZ0 686 aa15.03■□□□□ -0
CLCNKA-201ENST00000331433 CCDC117Q8IWD4 279 aaPredicted RBP15.03■□□□□ -0
CLCNKA-201ENST00000331433 C2CD4AQ8NCU7 369 aaPredicted RBP15.03■□□□□ -0
CLCNKA-201ENST00000331433 PTCD2Q8WV60 388 aaKnown RBP15.03■□□□□ -0
CLCNKA-201ENST00000331433 IMP4Q96G21 291 aaKnown RBP15.03■□□□□ -0
CLCNKA-201ENST00000331433 PANX3Q96QZ0 392 aa15.03■□□□□ -0
CLCNKA-201ENST00000331433 OR52B2Q96RD2 323 aa15.03■□□□□ -0
CLCNKA-201ENST00000331433 SEPT5Q99719 369 aaPredicted RBP15.03■□□□□ -0
CLCNKA-201ENST00000331433 UBE2OQ9C0C9 1292 aaKnown RBP15.03■□□□□ -0
CLCNKA-201ENST00000331433 C1orf21Q9H246 121 aa15.03■□□□□ -0
CLCNKA-201ENST00000331433 SP110Q9HB58 689 aa15.03■□□□□ -0
CLCNKA-201ENST00000331433 MRM3Q9HC36 420 aaKnown RBP15.03■□□□□ -0
CLCNKA-201ENST00000331433 TMEM248Q9NWD8 314 aa15.03■□□□□ -0
CLCNKA-201ENST00000331433 FBXO5Q9UKT4 447 aa15.03■□□□□ -0
CLCNKA-201ENST00000331433 LOC100653049A0A140TA62 436 aa15.02■□□□□ -0
CLCNKA-201ENST00000331433 SYN3O14994 580 aa15.02■□□□□ -0
CLCNKA-201ENST00000331433 ZBTB14O43829 449 aa15.02■□□□□ -0
CLCNKA-201ENST00000331433 KRT34O76011 436 aa15.02■□□□□ -0
CLCNKA-201ENST00000331433 CPB1P15086 417 aa15.02■□□□□ -0
CLCNKA-201ENST00000331433 PAMP19021 973 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms