RNA–Protein interactions for RNA: ENST00000330374.6

VMA21-201, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMA21, Length 4,717 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-201ENST00000330374 TMEM132DQ14C87 1099 aa7.98□□□□□ -1.13
VMA21-201ENST00000330374 ZNF831Q5JPB2 1677 aa7.98□□□□□ -1.13
VMA21-201ENST00000330374 LDLRAP1Q5SW96 308 aa7.98□□□□□ -1.13
VMA21-201ENST00000330374 LIPMQ5VYY2 423 aa7.98□□□□□ -1.13
VMA21-201ENST00000330374 FAM160B1Q5W0V3 765 aa7.98□□□□□ -1.13
VMA21-201ENST00000330374 EFCAB12Q6NXP0 572 aa7.98□□□□□ -1.13
VMA21-201ENST00000330374 LCLAT1Q6UWP7 414 aa7.98□□□□□ -1.13
VMA21-201ENST00000330374 TMEM26Q6ZUK4 368 aa7.98□□□□□ -1.13
VMA21-201ENST00000330374 ZNF354CQ86Y25 554 aa7.98□□□□□ -1.13
VMA21-201ENST00000330374 FSTL5Q8N475 847 aaPredicted RBP7.98□□□□□ -1.13
VMA21-201ENST00000330374 CBR4Q8N4T8 237 aa7.98□□□□□ -1.13
VMA21-201ENST00000330374 CANT1Q8WVQ1 401 aa7.98□□□□□ -1.13
VMA21-201ENST00000330374 SLC45A3Q96JT2 553 aa7.98□□□□□ -1.13
VMA21-201ENST00000330374 CLK4Q9HAZ1 481 aaKnown RBP7.98□□□□□ -1.13
VMA21-201ENST00000330374 PNPLA3Q9NST1 481 aa7.98□□□□□ -1.13
VMA21-201ENST00000330374 CNOT6Q9ULM6 557 aaKnown RBP7.98□□□□□ -1.13
VMA21-201ENST00000330374 ZBTB11O95625 1053 aaPredicted RBP7.98□□□□□ -1.13
VMA21-201ENST00000330374 COL6A2P12110 1019 aa7.98□□□□□ -1.13
VMA21-201ENST00000330374 CD247P20963 164 aa7.98□□□□□ -1.13
VMA21-201ENST00000330374 NR4A1P22736 598 aa7.98□□□□□ -1.13
VMA21-201ENST00000330374 NMBRP28336 390 aa7.98□□□□□ -1.13
VMA21-201ENST00000330374 SULT1E1P49888 294 aa7.98□□□□□ -1.13
VMA21-201ENST00000330374 PRKAA1Q13131 559 aa7.98□□□□□ -1.13
VMA21-201ENST00000330374 NBPF12Q5TAG4 269 aaPredicted RBP7.98□□□□□ -1.13
VMA21-201ENST00000330374 IER5Q5VY09 327 aa7.98□□□□□ -1.13
VMA21-201ENST00000330374 BBS5Q8N3I7 341 aa7.98□□□□□ -1.13
VMA21-201ENST00000330374 DLG3Q92796 817 aa7.98□□□□□ -1.13
VMA21-201ENST00000330374 CLP1Q92989 425 aaKnown RBP7.98□□□□□ -1.13
VMA21-201ENST00000330374 EXT2Q93063 718 aa7.98□□□□□ -1.13
VMA21-201ENST00000330374 NXNL1Q96CM4 212 aa7.98□□□□□ -1.13
VMA21-201ENST00000330374 OSBPL11Q9BXB4 747 aa7.98□□□□□ -1.13
VMA21-201ENST00000330374 NIFKQ9BYG3 293 aaKnown RBP7.98□□□□□ -1.13
VMA21-201ENST00000330374 SLC2A11Q9BYW1 496 aa7.98□□□□□ -1.13
VMA21-201ENST00000330374 PRKD2Q9BZL6 878 aa7.98□□□□□ -1.13
VMA21-201ENST00000330374 LRRC40Q9H9A6 602 aa7.98□□□□□ -1.13
VMA21-201ENST00000330374 HEATR9A2RTY3 570 aa7.98□□□□□ -1.13
VMA21-201ENST00000330374 TMEM114B3SHH9 223 aa7.98□□□□□ -1.13
VMA21-201ENST00000330374 C9IYK1 514 aa7.98□□□□□ -1.13
VMA21-201ENST00000330374 ACKR2O00590 384 aa7.98□□□□□ -1.13
VMA21-201ENST00000330374 MDM4O15151 490 aa7.98□□□□□ -1.13
VMA21-201ENST00000330374 COQ9O75208 318 aa7.98□□□□□ -1.13
VMA21-201ENST00000330374 FARP2O94887 1054 aaPredicted RBP7.98□□□□□ -1.13
VMA21-201ENST00000330374 OCM2P0CE71 109 aa7.98□□□□□ -1.13
VMA21-201ENST00000330374 OCMP0CE72 109 aaPredicted RBP7.98□□□□□ -1.13
VMA21-201ENST00000330374 ZFXP17010 805 aaPredicted RBP7.98□□□□□ -1.13
VMA21-201ENST00000330374 EEF1B2P24534 225 aaKnown RBP7.98□□□□□ -1.13
VMA21-201ENST00000330374 RXRGP48443 463 aa7.98□□□□□ -1.13
VMA21-201ENST00000330374 SLC7A2P52569 658 aa7.98□□□□□ -1.13
VMA21-201ENST00000330374 GHRHRQ02643 423 aa7.98□□□□□ -1.13
VMA21-201ENST00000330374 SFSWAPQ12872 951 aaKnown RBP7.98□□□□□ -1.13
VMA21-201ENST00000330374 PLCL1Q15111 1095 aa7.98□□□□□ -1.13
VMA21-201ENST00000330374 ADRM1Q16186 407 aa7.98□□□□□ -1.13
VMA21-201ENST00000330374 FGD3Q5JSP0 725 aa7.98□□□□□ -1.13
VMA21-201ENST00000330374 CHSY3Q70JA7 882 aa7.98□□□□□ -1.13
VMA21-201ENST00000330374 PPP1R13LQ8WUF5 828 aa7.98□□□□□ -1.13
VMA21-201ENST00000330374 PHF21BQ96EK2 531 aa7.98□□□□□ -1.13
VMA21-201ENST00000330374 FBXL20Q96IG2 436 aa7.98□□□□□ -1.13
VMA21-201ENST00000330374 CNDP1Q96KN2 507 aa7.98□□□□□ -1.13
VMA21-201ENST00000330374 TEX13BQ9BXU2 312 aa7.98□□□□□ -1.13
VMA21-201ENST00000330374 CHST12Q9NRB3 414 aa7.98□□□□□ -1.13
VMA21-201ENST00000330374 TBC1D23Q9NUY8 699 aa7.98□□□□□ -1.13
VMA21-201ENST00000330374 FAIMQ9NVQ4 179 aa7.98□□□□□ -1.13
VMA21-201ENST00000330374 DPP3Q9NY33 737 aa7.98□□□□□ -1.13
VMA21-201ENST00000330374 ARID2Q68CP9 1835 aa7.97□□□□□ -1.13
VMA21-201ENST00000330374 SH3PXD2BA1X283 911 aa7.97□□□□□ -1.13
VMA21-201ENST00000330374 DLX3O60479 287 aa7.97□□□□□ -1.13
VMA21-201ENST00000330374 NUP107P57740 925 aa7.97□□□□□ -1.13
VMA21-201ENST00000330374 MPP1Q00013 466 aa7.97□□□□□ -1.13
VMA21-201ENST00000330374 GRM1Q13255 1194 aa7.97□□□□□ -1.13
VMA21-201ENST00000330374 FASTKQ14296 549 aaKnown RBP7.97□□□□□ -1.13
VMA21-201ENST00000330374 HMBOX1Q6NT76 420 aa7.97□□□□□ -1.13
VMA21-201ENST00000330374 ELMSAN1Q6PJG2 1045 aa7.97□□□□□ -1.13
VMA21-201ENST00000330374 DENND6AQ8IWF6 608 aa7.97□□□□□ -1.13
VMA21-201ENST00000330374 COPS5Q92905 334 aa7.97□□□□□ -1.13
VMA21-201ENST00000330374 DRC3Q9H069 523 aa7.97□□□□□ -1.13
VMA21-201ENST00000330374 PIF1Q9H611 641 aa7.97□□□□□ -1.13
VMA21-201ENST00000330374 POLR1BQ9H9Y6 1135 aa7.97□□□□□ -1.13
VMA21-201ENST00000330374 PCDHGA7Q9Y5G6 932 aa7.97□□□□□ -1.13
VMA21-201ENST00000330374 EVPLQ92817 2033 aa7.97□□□□□ -1.13
VMA21-201ENST00000330374 A0A087WZ62 844 aa7.97□□□□□ -1.13
VMA21-201ENST00000330374 TRIM43BA6NCK2 446 aa7.97□□□□□ -1.13
VMA21-201ENST00000330374 VTNP04004 478 aa7.97□□□□□ -1.13
VMA21-201ENST00000330374 TRAF2Q12933 501 aa7.97□□□□□ -1.13
VMA21-201ENST00000330374 TARBP2Q15633 366 aaKnown RBP7.97□□□□□ -1.13
VMA21-201ENST00000330374 DPYSL2Q16555 572 aa7.97□□□□□ -1.13
VMA21-201ENST00000330374 SPANXN3Q5MJ09 141 aa7.97□□□□□ -1.13
VMA21-201ENST00000330374 ZNF280CQ8ND82 737 aa7.97□□□□□ -1.13
VMA21-201ENST00000330374 SLCO4A1Q96BD0 722 aa7.97□□□□□ -1.13
VMA21-201ENST00000330374 DCPSQ96C86 337 aaKnown RBP7.97□□□□□ -1.13
VMA21-201ENST00000330374 MAML3Q96JK9 1138 aa7.97□□□□□ -1.13
VMA21-201ENST00000330374 FDXACB1Q9BRP7 624 aaPredicted RBP7.97□□□□□ -1.13
VMA21-201ENST00000330374 TGIF2Q9GZN2 237 aa7.97□□□□□ -1.13
VMA21-201ENST00000330374 CXorf21Q9HAI6 301 aa7.97□□□□□ -1.13
VMA21-201ENST00000330374 FBRSL1Q9HCM7 1045 aaKnown RBP7.97□□□□□ -1.13
VMA21-201ENST00000330374 TRNAU1APQ9NX07 287 aaKnown RBP7.97□□□□□ -1.13
VMA21-201ENST00000330374 GIMAP2Q9UG22 337 aa7.97□□□□□ -1.13
VMA21-201ENST00000330374 AKT3Q9Y243 479 aa7.97□□□□□ -1.13
VMA21-201ENST00000330374 GJA3Q9Y6H8 435 aa7.97□□□□□ -1.13
VMA21-201ENST00000330374 YWHAQP27348 245 aa7.97□□□□□ -1.13
VMA21-201ENST00000330374 NR2C2P49116 596 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms