RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 COLGALT2Q8IYK4 626 aa14.75□□□□□ -0.05
TPM3-206ENST00000330188 PCSK9Q8NBP7 692 aaKnown RBP14.75□□□□□ -0.05
TPM3-206ENST00000330188 C2CD4AQ8NCU7 369 aaPredicted RBP14.75□□□□□ -0.05
TPM3-206ENST00000330188 SHKBP1Q8TBC3 707 aa14.75□□□□□ -0.05
TPM3-206ENST00000330188 FUBP3Q96I24 572 aaKnown RBP eCLIP14.75□□□□□ -0.05
TPM3-206ENST00000330188 SCYL1Q96KG9 808 aa14.75□□□□□ -0.05
TPM3-206ENST00000330188 C8orf48Q96LL4 319 aa14.75□□□□□ -0.05
TPM3-206ENST00000330188 DRC3Q9H069 523 aa14.75□□□□□ -0.05
TPM3-206ENST00000330188 ILKAPQ9H0C8 392 aaPredicted RBP14.75□□□□□ -0.05
TPM3-206ENST00000330188 TRPV6Q9H1D0 765 aa14.75□□□□□ -0.05
TPM3-206ENST00000330188 ATXN3LQ9H3M9 355 aa14.75□□□□□ -0.05
TPM3-206ENST00000330188 TBC1D13Q9NVG8 400 aa14.75□□□□□ -0.05
TPM3-206ENST00000330188 FNIP2Q9P278 1114 aa14.75□□□□□ -0.05
TPM3-206ENST00000330188 ZNF212Q9UDV6 495 aa14.75□□□□□ -0.05
TPM3-206ENST00000330188 RAP2CQ9Y3L5 183 aa14.75□□□□□ -0.05
TPM3-206ENST00000330188 WASF2Q9Y6W5 498 aa14.75□□□□□ -0.05
TPM3-206ENST00000330188 VWA8A3KMH1 1905 aa14.75□□□□□ -0.05
TPM3-206ENST00000330188 ZBTB14O43829 449 aa14.74□□□□□ -0.05
TPM3-206ENST00000330188 NEBLO76041 1014 aa14.74□□□□□ -0.05
TPM3-206ENST00000330188 EOMESO95936 686 aa14.74□□□□□ -0.05
TPM3-206ENST00000330188 CKBP12277 381 aa14.74□□□□□ -0.05
TPM3-206ENST00000330188 CCR10P46092 362 aa14.74□□□□□ -0.05
TPM3-206ENST00000330188 GRIA4P48058 902 aa14.74□□□□□ -0.05
TPM3-206ENST00000330188 PRKAA2P54646 552 aa14.74□□□□□ -0.05
TPM3-206ENST00000330188 RAB10P61026 200 aa14.74□□□□□ -0.05
TPM3-206ENST00000330188 MUM1Q2TAK8 710 aa14.74□□□□□ -0.05
TPM3-206ENST00000330188 UMODL1-AS1Q8N2C9 162 aa14.74□□□□□ -0.05
TPM3-206ENST00000330188 FSTL5Q8N475 847 aaPredicted RBP14.74□□□□□ -0.05
TPM3-206ENST00000330188 AGR3Q8TD06 166 aa14.74□□□□□ -0.05
TPM3-206ENST00000330188 CMTM5Q96DZ9 223 aa14.74□□□□□ -0.05
TPM3-206ENST00000330188 GPR78Q96P69 363 aa14.74□□□□□ -0.05
TPM3-206ENST00000330188 UBE2OQ9C0C9 1292 aaKnown RBP14.74□□□□□ -0.05
TPM3-206ENST00000330188 SLC25A51Q9H1U9 297 aa14.74□□□□□ -0.05
TPM3-206ENST00000330188 PRDM5Q9NQX1 630 aaPredicted RBP14.74□□□□□ -0.05
TPM3-206ENST00000330188 ACSS2Q9NR19 701 aa14.74□□□□□ -0.05
TPM3-206ENST00000330188 GEMIN8Q9NWZ8 242 aaKnown RBP14.74□□□□□ -0.05
TPM3-206ENST00000330188 ACOT9Q9Y305 439 aa14.74□□□□□ -0.05
TPM3-206ENST00000330188 E9PBE3 544 aa14.74□□□□□ -0.05
TPM3-206ENST00000330188 MATN2O00339 956 aa14.74□□□□□ -0.05
TPM3-206ENST00000330188 DCXO43602 365 aa14.74□□□□□ -0.05
TPM3-206ENST00000330188 KLHL41O60662 606 aa14.74□□□□□ -0.05
TPM3-206ENST00000330188 ELNP15502 786 aa14.74□□□□□ -0.05
TPM3-206ENST00000330188 STMN1P16949 149 aa14.74□□□□□ -0.05
TPM3-206ENST00000330188 PRDX6P30041 224 aa14.74□□□□□ -0.05
TPM3-206ENST00000330188 GRK4P32298 578 aa14.74□□□□□ -0.05
TPM3-206ENST00000330188 OR1G1P47890 313 aa14.74□□□□□ -0.05
TPM3-206ENST00000330188 NUMBP49757 651 aa14.74□□□□□ -0.05
TPM3-206ENST00000330188 WNT3AP56704 352 aa14.74□□□□□ -0.05
TPM3-206ENST00000330188 TBX4P57082 545 aa14.74□□□□□ -0.05
TPM3-206ENST00000330188 USP46P62068 366 aa14.74□□□□□ -0.05
TPM3-206ENST00000330188 DLG1Q12959 904 aa14.74□□□□□ -0.05
TPM3-206ENST00000330188 SEPT6Q14141 434 aa14.74□□□□□ -0.05
TPM3-206ENST00000330188 PCSK7Q16549 785 aa14.74□□□□□ -0.05
TPM3-206ENST00000330188 FSCBQ5H9T9 825 aa14.74□□□□□ -0.05
TPM3-206ENST00000330188 NOMO2Q5JPE7 1267 aa14.74□□□□□ -0.05
TPM3-206ENST00000330188 RALGPS1Q5JS13 557 aa14.74□□□□□ -0.05
TPM3-206ENST00000330188 C1orf146Q5VVC0 180 aa14.74□□□□□ -0.05
TPM3-206ENST00000330188 TRAF7Q6Q0C0 670 aa14.74□□□□□ -0.05
TPM3-206ENST00000330188 SLC24A5Q71RS6 500 aa14.74□□□□□ -0.05
TPM3-206ENST00000330188 TFAP2DQ7Z6R9 452 aa14.74□□□□□ -0.05
TPM3-206ENST00000330188 NXNL1Q96CM4 212 aa14.74□□□□□ -0.05
TPM3-206ENST00000330188 OR52B2Q96RD2 323 aa14.74□□□□□ -0.05
TPM3-206ENST00000330188 SHCBP1LQ9BZQ2 653 aa14.74□□□□□ -0.05
TPM3-206ENST00000330188 GMIPQ9P107 970 aa14.74□□□□□ -0.05
TPM3-206ENST00000330188 TMEM88BA6NKF7 163 aa14.73□□□□□ -0.05
TPM3-206ENST00000330188 PIGNO95427 931 aa14.73□□□□□ -0.05
TPM3-206ENST00000330188 PAMP19021 973 aa14.73□□□□□ -0.05
TPM3-206ENST00000330188 GLDCP23378 1020 aa14.73□□□□□ -0.05
TPM3-206ENST00000330188 CD151P48509 253 aa14.73□□□□□ -0.05
TPM3-206ENST00000330188 HNRNPDQ14103 355 aaKnown RBP14.73□□□□□ -0.05
TPM3-206ENST00000330188 MBTPS1Q14703 1052 aa14.73□□□□□ -0.05
TPM3-206ENST00000330188 NFE2Q16621 373 aaPredicted RBP14.73□□□□□ -0.05
TPM3-206ENST00000330188 ARL13AQ5H913 290 aaPredicted RBP14.73□□□□□ -0.05
TPM3-206ENST00000330188 MS4A13Q5J8X5 152 aa14.73□□□□□ -0.05
TPM3-206ENST00000330188 METTL21CQ5VZV1 264 aa14.73□□□□□ -0.05
TPM3-206ENST00000330188 ZNF470Q6ECI4 717 aa14.73□□□□□ -0.05
TPM3-206ENST00000330188 SCG3Q8WXD2 468 aaKnown RBP14.73□□□□□ -0.05
TPM3-206ENST00000330188 HMCESQ96FZ2 354 aa14.73□□□□□ -0.05
TPM3-206ENST00000330188 FAM167BQ9BTA0 163 aa14.73□□□□□ -0.05
TPM3-206ENST00000330188 PRKD2Q9BZL6 878 aa14.73□□□□□ -0.05
TPM3-206ENST00000330188 FBXO44Q9H4M3 255 aa14.73□□□□□ -0.05
TPM3-206ENST00000330188 ARNT2Q9HBZ2 717 aa14.73□□□□□ -0.05
TPM3-206ENST00000330188 GPAMQ9HCL2 828 aa14.73□□□□□ -0.05
TPM3-206ENST00000330188 ATP13A1Q9HD20 1204 aa14.73□□□□□ -0.05
TPM3-206ENST00000330188 XPR1Q9UBH6 696 aa14.73□□□□□ -0.05
TPM3-206ENST00000330188 DNAJB4Q9UDY4 337 aa14.73□□□□□ -0.05
TPM3-206ENST00000330188 PRG3Q9Y2Y8 225 aaPredicted RBP14.73□□□□□ -0.05
TPM3-206ENST00000330188 J3KR12 359 aa14.72□□□□□ -0.05
TPM3-206ENST00000330188 DLX3O60479 287 aa14.72□□□□□ -0.05
TPM3-206ENST00000330188 CCNT2O60583 730 aaKnown RBP14.72□□□□□ -0.05
TPM3-206ENST00000330188 CNTN5O94779 1100 aa14.72□□□□□ -0.05
TPM3-206ENST00000330188 SLC2A3P11169 496 aa14.72□□□□□ -0.05
TPM3-206ENST00000330188 RHOQP17081 205 aa14.72□□□□□ -0.05
TPM3-206ENST00000330188 ITGAXP20702 1163 aa14.72□□□□□ -0.05
TPM3-206ENST00000330188 CRABP2P29373 138 aa14.72□□□□□ -0.05
TPM3-206ENST00000330188 RPL14P50914 215 aaKnown RBP14.72□□□□□ -0.05
TPM3-206ENST00000330188 NDST2P52849 883 aa14.72□□□□□ -0.05
TPM3-206ENST00000330188 NAGLUP54802 743 aa14.72□□□□□ -0.05
TPM3-206ENST00000330188 TAS2R39P59534 338 aa14.72□□□□□ -0.05
TPM3-206ENST00000330188 FAM189BP81408 668 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms