RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 NSUN2Q08J23 767 aaKnown RBP eCLIP15.57■□□□□ 0.08
BRCC3-201ENST00000330045 MFSD10Q14728 455 aa15.57■□□□□ 0.08
BRCC3-201ENST00000330045 PKN3Q6P5Z2 889 aa15.57■□□□□ 0.08
BRCC3-201ENST00000330045 SPATA22Q8NHS9 363 aa15.57■□□□□ 0.08
BRCC3-201ENST00000330045 DCUN1D1Q96GG9 259 aa15.57■□□□□ 0.08
BRCC3-201ENST00000330045 TSPYL2Q9H2G4 693 aaPredicted RBP15.57■□□□□ 0.08
BRCC3-201ENST00000330045 XPR1Q9UBH6 696 aa15.57■□□□□ 0.08
BRCC3-201ENST00000330045 BCAP29Q9UHQ4 241 aa15.57■□□□□ 0.08
BRCC3-201ENST00000330045 AAR2Q9Y312 384 aaKnown RBP15.57■□□□□ 0.08
BRCC3-201ENST00000330045 TIMM13Q9Y5L4 95 aaPredicted RBP15.57■□□□□ 0.08
BRCC3-201ENST00000330045 CFLARO15519 480 aa15.56■□□□□ 0.08
BRCC3-201ENST00000330045 CACNG3O60359 315 aa15.56■□□□□ 0.08
BRCC3-201ENST00000330045 SRGAP2BP0DMP2 458 aa15.56■□□□□ 0.08
BRCC3-201ENST00000330045 ENO3P13929 434 aaPredicted RBP15.56■□□□□ 0.08
BRCC3-201ENST00000330045 XRCC1P18887 633 aaPredicted RBP15.56■□□□□ 0.08
BRCC3-201ENST00000330045 DNAJB1P25685 340 aa15.56■□□□□ 0.08
BRCC3-201ENST00000330045 RGS2P41220 211 aa15.56■□□□□ 0.08
BRCC3-201ENST00000330045 GRIA2P42262 883 aa15.56■□□□□ 0.08
BRCC3-201ENST00000330045 MRPS22P82650 360 aaKnown RBP15.56■□□□□ 0.08
BRCC3-201ENST00000330045 COG7P83436 770 aa15.56■□□□□ 0.08
BRCC3-201ENST00000330045 PM20D1Q6GTS8 502 aa15.56■□□□□ 0.08
BRCC3-201ENST00000330045 ZFP1Q6P2D0 407 aa15.56■□□□□ 0.08
BRCC3-201ENST00000330045 DCLRE1AQ6PJP8 1040 aa15.56■□□□□ 0.08
BRCC3-201ENST00000330045 UGT2A3Q6UWM9 527 aa15.56■□□□□ 0.08
BRCC3-201ENST00000330045 PGAM4Q8N0Y7 254 aa15.56■□□□□ 0.08
BRCC3-201ENST00000330045 LRGUKQ96M69 825 aa15.56■□□□□ 0.08
BRCC3-201ENST00000330045 ZBTB26Q9HCK0 441 aa15.56■□□□□ 0.08
BRCC3-201ENST00000330045 IGHA2P01877 340 aa15.56■□□□□ 0.08
BRCC3-201ENST00000330045 JUNP05412 331 aaKnown RBP15.56■□□□□ 0.08
BRCC3-201ENST00000330045 PABPC4LP0CB38 370 aaKnown RBP15.56■□□□□ 0.08
BRCC3-201ENST00000330045 CRYBB1P53674 252 aaPredicted RBP15.56■□□□□ 0.08
BRCC3-201ENST00000330045 PKNOX1P55347 436 aa15.56■□□□□ 0.08
BRCC3-201ENST00000330045 RAB10P61026 200 aa15.56■□□□□ 0.08
BRCC3-201ENST00000330045 CTBP1Q13363 440 aa15.56■□□□□ 0.08
BRCC3-201ENST00000330045 ART3Q13508 389 aa15.56■□□□□ 0.08
BRCC3-201ENST00000330045 ZNF460Q14592 562 aa15.56■□□□□ 0.08
BRCC3-201ENST00000330045 POU6F1Q14863 301 aa15.56■□□□□ 0.08
BRCC3-201ENST00000330045 HERC3Q15034 1050 aa15.56■□□□□ 0.08
BRCC3-201ENST00000330045 PDCD2Q16342 344 aaPredicted RBP15.56■□□□□ 0.08
BRCC3-201ENST00000330045 RARS2Q5T160 578 aaKnown RBP15.56■□□□□ 0.08
BRCC3-201ENST00000330045 BHLHA9Q7RTU4 235 aa15.56■□□□□ 0.08
BRCC3-201ENST00000330045 DENND6AQ8IWF6 608 aa15.56■□□□□ 0.08
BRCC3-201ENST00000330045 KLHDC8BQ8IXV7 354 aa15.56■□□□□ 0.08
BRCC3-201ENST00000330045 TRIB2Q92519 343 aa15.56■□□□□ 0.08
BRCC3-201ENST00000330045 NCSTNQ92542 709 aa15.56■□□□□ 0.08
BRCC3-201ENST00000330045 RNF34Q969K3 372 aa15.56■□□□□ 0.08
BRCC3-201ENST00000330045 NXNL1Q96CM4 212 aa15.56■□□□□ 0.08
BRCC3-201ENST00000330045 TSGA13Q96PP4 275 aa15.56■□□□□ 0.08
BRCC3-201ENST00000330045 TBL1YQ9BQ87 522 aa15.56■□□□□ 0.08
BRCC3-201ENST00000330045 DMAP1Q9NPF5 467 aaPredicted RBP15.56■□□□□ 0.08
BRCC3-201ENST00000330045 HHLA1C9JL84 531 aa15.55■□□□□ 0.08
BRCC3-201ENST00000330045 DENRO43583 198 aaKnown RBP15.55■□□□□ 0.08
BRCC3-201ENST00000330045 AP1G1O43747 822 aa15.55■□□□□ 0.08
BRCC3-201ENST00000330045 TADA2AO75478 443 aa15.55■□□□□ 0.08
BRCC3-201ENST00000330045 VAPBO95292 243 aa15.55■□□□□ 0.08
BRCC3-201ENST00000330045 MT-CYBP00156 380 aaPredicted RBP15.55■□□□□ 0.08
BRCC3-201ENST00000330045 STMN1P16949 149 aa15.55■□□□□ 0.08
BRCC3-201ENST00000330045 MSX2P35548 267 aaPredicted RBP15.55■□□□□ 0.08
BRCC3-201ENST00000330045 POLD2P49005 469 aa15.55■□□□□ 0.08
BRCC3-201ENST00000330045 RAB27AP51159 221 aa15.55■□□□□ 0.08
BRCC3-201ENST00000330045 MPP1Q00013 466 aa15.55■□□□□ 0.08
BRCC3-201ENST00000330045 ZNF33AQ06730 810 aa15.55■□□□□ 0.08
BRCC3-201ENST00000330045 CEACAM7Q14002 265 aa15.55■□□□□ 0.08
BRCC3-201ENST00000330045 CEP97Q8IW35 865 aa15.55■□□□□ 0.08
BRCC3-201ENST00000330045 CNTN4Q8IWV2 1026 aa15.55■□□□□ 0.08
BRCC3-201ENST00000330045 TMEM86AQ8N2M4 240 aa15.55■□□□□ 0.08
BRCC3-201ENST00000330045 CCNYL1Q8N7R7 359 aa15.55■□□□□ 0.08
BRCC3-201ENST00000330045 PDCD6IPQ8WUM4 868 aaKnown RBP15.55■□□□□ 0.08
BRCC3-201ENST00000330045 USP13Q92995 863 aaPredicted RBP15.55■□□□□ 0.08
BRCC3-201ENST00000330045 MARK4Q96L34 752 aa15.55■□□□□ 0.08
BRCC3-201ENST00000330045 WDR41Q9HAD4 459 aa15.55■□□□□ 0.08
BRCC3-201ENST00000330045 EFCAB1Q9HAE3 211 aa15.55■□□□□ 0.08
BRCC3-201ENST00000330045 GPBP1L1Q9HC44 474 aaPredicted RBP15.55■□□□□ 0.08
BRCC3-201ENST00000330045 C15orf38-AP3S2A0A0A6YYH1 394 aa15.55■□□□□ 0.08
BRCC3-201ENST00000330045 FAM95CA0A1B0GW59 222 aa15.55■□□□□ 0.08
BRCC3-201ENST00000330045 DFFAO00273 331 aa15.55■□□□□ 0.08
BRCC3-201ENST00000330045 PGK1P00558 417 aa15.55■□□□□ 0.08
BRCC3-201ENST00000330045 TLR1Q15399 786 aa15.55■□□□□ 0.08
BRCC3-201ENST00000330045 CNGA3Q16281 694 aa15.55■□□□□ 0.08
BRCC3-201ENST00000330045 RWDD4Q6NW29 188 aaKnown RBP15.55■□□□□ 0.08
BRCC3-201ENST00000330045 ESRP1Q6NXG1 681 aaKnown RBP15.55■□□□□ 0.08
BRCC3-201ENST00000330045 ARPINQ7Z6K5 226 aa15.55■□□□□ 0.08
BRCC3-201ENST00000330045 TMEM126BQ8IUX1 230 aa15.55■□□□□ 0.08
BRCC3-201ENST00000330045 SPATA6LQ8N4H0 392 aa15.55■□□□□ 0.08
BRCC3-201ENST00000330045 MARVELD2Q8N4S9 558 aa15.55■□□□□ 0.08
BRCC3-201ENST00000330045 GPR78Q96P69 363 aa15.55■□□□□ 0.08
BRCC3-201ENST00000330045 OMDQ99983 421 aa15.55■□□□□ 0.08
BRCC3-201ENST00000330045 FTHL17Q9BXU8 183 aa15.55■□□□□ 0.08
BRCC3-201ENST00000330045 PTCH2Q9Y6C5 1203 aa15.55■□□□□ 0.08
BRCC3-201ENST00000330045 SLC4A7Q9Y6M7 1214 aa15.55■□□□□ 0.08
BRCC3-201ENST00000330045 FNDC1Q4ZHG4 1894 aaPredicted RBP15.54■□□□□ 0.08
BRCC3-201ENST00000330045 ME2P23368 584 aa15.54■□□□□ 0.08
BRCC3-201ENST00000330045 CCNCP24863 283 aa15.54■□□□□ 0.08
BRCC3-201ENST00000330045 DPP6P42658 865 aa15.54■□□□□ 0.08
BRCC3-201ENST00000330045 MS4A2Q01362 244 aa15.54■□□□□ 0.08
BRCC3-201ENST00000330045 ADGRE1Q14246 886 aa15.54■□□□□ 0.08
BRCC3-201ENST00000330045 ARHGAP36Q6ZRI8 547 aa15.54■□□□□ 0.08
BRCC3-201ENST00000330045 TAC4Q86UU9 113 aa15.54■□□□□ 0.08
BRCC3-201ENST00000330045 RNF148Q8N7C7 305 aa15.54■□□□□ 0.08
BRCC3-201ENST00000330045 KDM1BQ8NB78 822 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms