RNA–Protein interactions for RNA: ENST00000329291.5

PGBD2-201, Transcript of piggyBac transposable element derived 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PGBD2, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD2-201ENST00000329291 TREX1Q9NSU2 369 aa16.07■□□□□ 0.16
PGBD2-201ENST00000329291 F5H5T6 163 aa16.06■□□□□ 0.16
PGBD2-201ENST00000329291 ITM2AO43736 263 aa16.06■□□□□ 0.16
PGBD2-201ENST00000329291 SNNO75324 88 aaPredicted RBP16.06■□□□□ 0.16
PGBD2-201ENST00000329291 TGDSO95455 350 aa16.06■□□□□ 0.16
PGBD2-201ENST00000329291 IL1BP01584 269 aa16.06■□□□□ 0.16
PGBD2-201ENST00000329291 T-ENOLP0DO92 83 aa16.06■□□□□ 0.16
PGBD2-201ENST00000329291 FGF3P11487 239 aaPredicted RBP16.06■□□□□ 0.16
PGBD2-201ENST00000329291 DNAJB2P25686 324 aa16.06■□□□□ 0.16
PGBD2-201ENST00000329291 LBX1P52954 281 aa16.06■□□□□ 0.16
PGBD2-201ENST00000329291 KCNJ2P63252 427 aa16.06■□□□□ 0.16
PGBD2-201ENST00000329291 IL10RBQ08334 325 aa16.06■□□□□ 0.16
PGBD2-201ENST00000329291 MTA1Q13330 715 aa16.06■□□□□ 0.16
PGBD2-201ENST00000329291 PCLAFQ15004 111 aa16.06■□□□□ 0.16
PGBD2-201ENST00000329291 PARP15Q460N3 678 aa16.06■□□□□ 0.16
PGBD2-201ENST00000329291 ACBD5Q5T8D3 534 aaPredicted RBP16.06■□□□□ 0.16
PGBD2-201ENST00000329291 MBLAC2Q68D91 279 aa16.06■□□□□ 0.16
PGBD2-201ENST00000329291 ZC3HC1Q86WB0 502 aaKnown RBP16.06■□□□□ 0.16
PGBD2-201ENST00000329291 KIF2BQ8N4N8 673 aa16.06■□□□□ 0.16
PGBD2-201ENST00000329291 GBP7Q8N8V2 638 aaPredicted RBP16.06■□□□□ 0.16
PGBD2-201ENST00000329291 PPHLN1Q8NEY8 458 aaKnown RBP16.06■□□□□ 0.16
PGBD2-201ENST00000329291 OR7D4Q8NG98 312 aa16.06■□□□□ 0.16
PGBD2-201ENST00000329291 TADA1Q96BN2 335 aa16.06■□□□□ 0.16
PGBD2-201ENST00000329291 PRICKLE1Q96MT3 831 aaPredicted RBP16.06■□□□□ 0.16
PGBD2-201ENST00000329291 NACA2Q9H009 215 aa16.06■□□□□ 0.16
PGBD2-201ENST00000329291 ARNT2Q9HBZ2 717 aa16.06■□□□□ 0.16
PGBD2-201ENST00000329291 DONSONQ9NYP3 566 aa16.06■□□□□ 0.16
PGBD2-201ENST00000329291 YIPF1Q9Y548 306 aa16.06■□□□□ 0.16
PGBD2-201ENST00000329291 PRAMEF11O60813 436 aa16.06■□□□□ 0.16
PGBD2-201ENST00000329291 STC2O76061 302 aa16.06■□□□□ 0.16
PGBD2-201ENST00000329291 SERPINB8P50452 374 aa16.06■□□□□ 0.16
PGBD2-201ENST00000329291 MPP1Q00013 466 aa16.06■□□□□ 0.16
PGBD2-201ENST00000329291 TNK2Q07912 1038 aa16.06■□□□□ 0.16
PGBD2-201ENST00000329291 PLD1Q13393 1074 aa16.06■□□□□ 0.16
PGBD2-201ENST00000329291 SEPT6Q14141 434 aa16.06■□□□□ 0.16
PGBD2-201ENST00000329291 LBRQ14739 615 aaKnown RBP16.06■□□□□ 0.16
PGBD2-201ENST00000329291 TBC1D1Q86TI0 1168 aaPredicted RBP16.06■□□□□ 0.16
PGBD2-201ENST00000329291 DDX53Q86TM3 631 aaKnown RBP16.06■□□□□ 0.16
PGBD2-201ENST00000329291 C10orf107Q8IVU9 208 aa16.06■□□□□ 0.16
PGBD2-201ENST00000329291 TNS4Q8IZW8 715 aa16.06■□□□□ 0.16
PGBD2-201ENST00000329291 OVCA2Q8WZ82 227 aa16.06■□□□□ 0.16
PGBD2-201ENST00000329291 PRR11Q96HE9 360 aaPredicted RBP16.06■□□□□ 0.16
PGBD2-201ENST00000329291 MYRFLQ96LU7 910 aa16.06■□□□□ 0.16
PGBD2-201ENST00000329291 NSMCE3Q96MG7 304 aa16.06■□□□□ 0.16
PGBD2-201ENST00000329291 TMEM120AQ9BXJ8 343 aa16.06■□□□□ 0.16
PGBD2-201ENST00000329291 SLC39A10Q9ULF5 831 aa16.06■□□□□ 0.16
PGBD2-201ENST00000329291 MYLKQ15746 1914 aa16.05■□□□□ 0.16
PGBD2-201ENST00000329291 A0A096LPK6 155 aa16.05■□□□□ 0.16
PGBD2-201ENST00000329291 SCAMP3O14828 347 aaKnown RBP16.05■□□□□ 0.16
PGBD2-201ENST00000329291 LYPLA1O75608 230 aaPredicted RBP16.05■□□□□ 0.16
PGBD2-201ENST00000329291 C2P06681 752 aa16.05■□□□□ 0.16
PGBD2-201ENST00000329291 SPATA31D3P0C874 917 aa16.05■□□□□ 0.16
PGBD2-201ENST00000329291 IRF1P10914 325 aa16.05■□□□□ 0.16
PGBD2-201ENST00000329291 GLDCP23378 1020 aa16.05■□□□□ 0.16
PGBD2-201ENST00000329291 ARRB2P32121 409 aa16.05■□□□□ 0.16
PGBD2-201ENST00000329291 ALDH1A3P47895 512 aa16.05■□□□□ 0.16
PGBD2-201ENST00000329291 MAPKAPK2P49137 400 aa16.05■□□□□ 0.16
PGBD2-201ENST00000329291 HARS2P49590 506 aaKnown RBP16.05■□□□□ 0.16
PGBD2-201ENST00000329291 CSRP3P50461 194 aa16.05■□□□□ 0.16
PGBD2-201ENST00000329291 CSE1LP55060 971 aaKnown RBP16.05■□□□□ 0.16
PGBD2-201ENST00000329291 YBEYP58557 167 aaPredicted RBP16.05■□□□□ 0.16
PGBD2-201ENST00000329291 TAF12Q16514 161 aa16.05■□□□□ 0.16
PGBD2-201ENST00000329291 TAF1BQ53T94 588 aaPredicted RBP16.05■□□□□ 0.16
PGBD2-201ENST00000329291 SPATA31D4Q6ZUB0 917 aa16.05■□□□□ 0.16
PGBD2-201ENST00000329291 CLEC14AQ86T13 490 aa16.05■□□□□ 0.16
PGBD2-201ENST00000329291 TMEM150AQ86TG1 271 aa16.05■□□□□ 0.16
PGBD2-201ENST00000329291 CCDC117Q8IWD4 279 aaPredicted RBP16.05■□□□□ 0.16
PGBD2-201ENST00000329291 DNAJC5GQ8N7S2 189 aa16.05■□□□□ 0.16
PGBD2-201ENST00000329291 ZNF398Q8TD17 642 aa16.05■□□□□ 0.16
PGBD2-201ENST00000329291 C7orf26Q96N11 449 aa16.05■□□□□ 0.16
PGBD2-201ENST00000329291 CYP2S1Q96SQ9 504 aa16.05■□□□□ 0.16
PGBD2-201ENST00000329291 PDFQ9HBH1 243 aa16.05■□□□□ 0.16
PGBD2-201ENST00000329291 IL23AQ9NPF7 189 aa16.05■□□□□ 0.16
PGBD2-201ENST00000329291 TRPM5Q9NZQ8 1165 aa16.05■□□□□ 0.16
PGBD2-201ENST00000329291 HEY2Q9UBP5 337 aa16.05■□□□□ 0.16
PGBD2-201ENST00000329291 TSPAN3O60637 253 aa16.04■□□□□ 0.16
PGBD2-201ENST00000329291 KITP10721 976 aa16.04■□□□□ 0.16
PGBD2-201ENST00000329291 SAT1P21673 171 aa16.04■□□□□ 0.16
PGBD2-201ENST00000329291 HOXD9P28356 352 aaPredicted RBP16.04■□□□□ 0.16
PGBD2-201ENST00000329291 CORO1AP31146 461 aaKnown RBP16.04■□□□□ 0.16
PGBD2-201ENST00000329291 PPM1AP35813 382 aa16.04■□□□□ 0.16
PGBD2-201ENST00000329291 ARFIP2P53365 341 aa16.04■□□□□ 0.16
PGBD2-201ENST00000329291 STX3Q13277 289 aa16.04■□□□□ 0.16
PGBD2-201ENST00000329291 SETDB1Q15047 1291 aa16.04■□□□□ 0.16
PGBD2-201ENST00000329291 INSCQ1MX18 579 aa16.04■□□□□ 0.16
PGBD2-201ENST00000329291 SIRPB2Q5JXA9 342 aa16.04■□□□□ 0.16
PGBD2-201ENST00000329291 ATG16L1Q676U5 607 aa16.04■□□□□ 0.16
PGBD2-201ENST00000329291 ASRGL1Q7L266 308 aa16.04■□□□□ 0.16
PGBD2-201ENST00000329291 OTOP2Q7RTS6 562 aa16.04■□□□□ 0.16
PGBD2-201ENST00000329291 CNTN4Q8IWV2 1026 aa16.04■□□□□ 0.16
PGBD2-201ENST00000329291 PPP1R2P1Q96PQ5 205 aa16.04■□□□□ 0.16
PGBD2-201ENST00000329291 SLC22A12Q96S37 553 aa16.04■□□□□ 0.16
PGBD2-201ENST00000329291 UXTQ9UBK9 157 aaPredicted RBP16.04■□□□□ 0.16
PGBD2-201ENST00000329291 MARCOQ9UEW3 520 aaPredicted RBP16.04■□□□□ 0.16
PGBD2-201ENST00000329291 LAMA3Q16787 3333 aa16.04■□□□□ 0.16
PGBD2-201ENST00000329291 AURKAO14965 403 aa16.04■□□□□ 0.16
PGBD2-201ENST00000329291 DCTN3O75935 186 aa16.04■□□□□ 0.16
PGBD2-201ENST00000329291 MYL2P10916 166 aa16.04■□□□□ 0.16
PGBD2-201ENST00000329291 SLC11A2P49281 568 aa16.04■□□□□ 0.16
PGBD2-201ENST00000329291 SERPINH1P50454 418 aaKnown RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms