RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 PALMDQ9NP74 551 aa11.54□□□□□ -0.56
COL4A5-201ENST00000328300 NOCTQ9UK39 431 aaKnown RBP11.54□□□□□ -0.56
COL4A5-201ENST00000328300 ZNF536O15090 1300 aa11.53□□□□□ -0.56
COL4A5-201ENST00000328300 C5orf60A6NFR6 353 aa11.53□□□□□ -0.56
COL4A5-201ENST00000328300 SLC28A1O00337 649 aa11.53□□□□□ -0.56
COL4A5-201ENST00000328300 TRAFD1O14545 582 aaPredicted RBP11.53□□□□□ -0.56
COL4A5-201ENST00000328300 APODP05090 189 aa11.53□□□□□ -0.56
COL4A5-201ENST00000328300 TACR2P21452 398 aa11.53□□□□□ -0.56
COL4A5-201ENST00000328300 GJA9P57773 515 aa11.53□□□□□ -0.56
COL4A5-201ENST00000328300 BOP1Q14137 746 aaKnown RBP11.53□□□□□ -0.56
COL4A5-201ENST00000328300 ATAD3BQ5T9A4 648 aa11.53□□□□□ -0.56
COL4A5-201ENST00000328300 TPGS1Q6ZTW0 290 aa11.53□□□□□ -0.56
COL4A5-201ENST00000328300 KIAA0408Q6ZU52 694 aa11.53□□□□□ -0.56
COL4A5-201ENST00000328300 ZFP28Q8NHY6 868 aa11.53□□□□□ -0.56
COL4A5-201ENST00000328300 CKAP2Q8WWK9 683 aa11.53□□□□□ -0.56
COL4A5-201ENST00000328300 INPP5DQ92835 1189 aa11.53□□□□□ -0.56
COL4A5-201ENST00000328300 EMID1Q96A84 441 aaPredicted RBP11.53□□□□□ -0.56
COL4A5-201ENST00000328300 POMKQ9H5K3 350 aa11.53□□□□□ -0.56
COL4A5-201ENST00000328300 A0A1B0GVM2 712 aa11.53□□□□□ -0.56
COL4A5-201ENST00000328300 TCAF2A6NFQ2 919 aa11.53□□□□□ -0.56
COL4A5-201ENST00000328300 URADA6NGE7 173 aa11.53□□□□□ -0.56
COL4A5-201ENST00000328300 KRT20P35900 424 aa11.53□□□□□ -0.56
COL4A5-201ENST00000328300 BTKQ06187 659 aa11.53□□□□□ -0.56
COL4A5-201ENST00000328300 DDR2Q16832 855 aa11.53□□□□□ -0.56
COL4A5-201ENST00000328300 CPXM1Q96SM3 734 aa11.53□□□□□ -0.56
COL4A5-201ENST00000328300 SLC40A1Q9NP59 571 aa11.53□□□□□ -0.56
COL4A5-201ENST00000328300 SSU72Q9NP77 194 aaKnown RBP11.53□□□□□ -0.56
COL4A5-201ENST00000328300 PDP2Q9P2J9 529 aa11.53□□□□□ -0.56
COL4A5-201ENST00000328300 ASLP04424 464 aa11.53□□□□□ -0.56
COL4A5-201ENST00000328300 LBPP18428 481 aa11.53□□□□□ -0.56
COL4A5-201ENST00000328300 WEE1P30291 646 aa11.53□□□□□ -0.56
COL4A5-201ENST00000328300 RAD23AP54725 363 aa11.53□□□□□ -0.56
COL4A5-201ENST00000328300 KPNB1Q14974 876 aaKnown RBP11.53□□□□□ -0.56
COL4A5-201ENST00000328300 RIPOR3Q96MK2 946 aa11.53□□□□□ -0.56
COL4A5-201ENST00000328300 DACH2Q96NX9 599 aa11.53□□□□□ -0.56
COL4A5-201ENST00000328300 RPS6KB2Q9UBS0 482 aa11.53□□□□□ -0.56
COL4A5-201ENST00000328300 DAB2P98082 770 aa11.53□□□□□ -0.56
COL4A5-201ENST00000328300 PURAQ00577 322 aaKnown RBP11.53□□□□□ -0.56
COL4A5-201ENST00000328300 SAMD4BQ5PRF9 694 aaKnown RBP11.53□□□□□ -0.56
COL4A5-201ENST00000328300 ECHDC2Q86YB7 292 aa11.53□□□□□ -0.56
COL4A5-201ENST00000328300 CRYBG2Q8N1P7 616 aa11.53□□□□□ -0.56
COL4A5-201ENST00000328300 DQX1Q8TE96 717 aaKnown RBP11.53□□□□□ -0.56
COL4A5-201ENST00000328300 C11orf49Q9H6J7 331 aa11.53□□□□□ -0.56
COL4A5-201ENST00000328300 RETREG1Q9H6L5 497 aa11.53□□□□□ -0.56
COL4A5-201ENST00000328300 ARL15Q9NXU5 204 aa11.53□□□□□ -0.56
COL4A5-201ENST00000328300 C4BP0C0L5 1744 aa11.53□□□□□ -0.56
COL4A5-201ENST00000328300 TPP1O14773 563 aa11.53□□□□□ -0.56
COL4A5-201ENST00000328300 GCATO75600 419 aa11.53□□□□□ -0.56
COL4A5-201ENST00000328300 PRNPP04156 253 aa11.53□□□□□ -0.56
COL4A5-201ENST00000328300 KCNA3P22001 575 aa11.53□□□□□ -0.56
COL4A5-201ENST00000328300 GABRB2P47870 512 aa11.53□□□□□ -0.56
COL4A5-201ENST00000328300 HCAR3P49019 387 aa11.53□□□□□ -0.56
COL4A5-201ENST00000328300 PLOD1Q02809 727 aaPredicted RBP11.53□□□□□ -0.56
COL4A5-201ENST00000328300 TMEM154Q6P9G4 183 aa11.53□□□□□ -0.56
COL4A5-201ENST00000328300 ZNF599Q96NL3 588 aa11.53□□□□□ -0.56
COL4A5-201ENST00000328300 HGH1Q9BTY7 390 aa11.53□□□□□ -0.56
COL4A5-201ENST00000328300 UGT2B28Q9BY64 529 aa11.53□□□□□ -0.56
COL4A5-201ENST00000328300 CEP41Q9BYV8 373 aa11.53□□□□□ -0.56
COL4A5-201ENST00000328300 NR5A2O00482 541 aa11.52□□□□□ -0.56
COL4A5-201ENST00000328300 DSG1Q02413 1049 aa11.52□□□□□ -0.56
COL4A5-201ENST00000328300 SLC10A6Q3KNW5 377 aa11.52□□□□□ -0.56
COL4A5-201ENST00000328300 NPNTQ6UXI9 565 aa11.52□□□□□ -0.56
COL4A5-201ENST00000328300 JOSD2Q8TAC2 188 aa11.52□□□□□ -0.56
COL4A5-201ENST00000328300 THAP11Q96EK4 314 aa11.52□□□□□ -0.56
COL4A5-201ENST00000328300 P2RY11Q96G91 374 aa11.52□□□□□ -0.56
COL4A5-201ENST00000328300 ADNPQ9H2P0 1102 aa11.52□□□□□ -0.56
COL4A5-201ENST00000328300 IGFLR1Q9H665 355 aa11.52□□□□□ -0.56
COL4A5-201ENST00000328300 SLC28A3Q9HAS3 691 aa11.52□□□□□ -0.56
COL4A5-201ENST00000328300 PAIP2BQ9ULR5 123 aaKnown RBP11.52□□□□□ -0.56
COL4A5-201ENST00000328300 IRAK2O43187 625 aa11.52□□□□□ -0.57
COL4A5-201ENST00000328300 USP1O94782 785 aa11.52□□□□□ -0.57
COL4A5-201ENST00000328300 F2P00734 622 aa11.52□□□□□ -0.57
COL4A5-201ENST00000328300 SQLEQ14534 574 aa11.52□□□□□ -0.57
COL4A5-201ENST00000328300 PAGE2Q7Z2X7 111 aa11.52□□□□□ -0.57
COL4A5-201ENST00000328300 OR4L1Q8NH43 312 aa11.52□□□□□ -0.57
COL4A5-201ENST00000328300 KAT2BQ92831 832 aa11.52□□□□□ -0.57
COL4A5-201ENST00000328300 VPS50Q96JG6 964 aa11.52□□□□□ -0.57
COL4A5-201ENST00000328300 CCT7Q99832 543 aa11.52□□□□□ -0.57
COL4A5-201ENST00000328300 KCTD14Q9BQ13 255 aaPredicted RBP11.52□□□□□ -0.57
COL4A5-201ENST00000328300 FAIM2Q9BWQ8 316 aa11.52□□□□□ -0.57
COL4A5-201ENST00000328300 GBA3Q9H227 469 aa11.52□□□□□ -0.57
COL4A5-201ENST00000328300 PRR23AA6NEV1 266 aa11.52□□□□□ -0.57
COL4A5-201ENST00000328300 PBX3P40426 434 aa11.52□□□□□ -0.57
COL4A5-201ENST00000328300 ASPAP45381 313 aa11.52□□□□□ -0.57
COL4A5-201ENST00000328300 GPR1P46091 355 aa11.52□□□□□ -0.57
COL4A5-201ENST00000328300 DAOAP59103 153 aa11.52□□□□□ -0.57
COL4A5-201ENST00000328300 ZNF544Q6NX49 715 aa11.52□□□□□ -0.57
COL4A5-201ENST00000328300 MTDHQ86UE4 582 aaKnown RBP11.52□□□□□ -0.57
COL4A5-201ENST00000328300 RASAL3Q86YV0 1011 aa11.52□□□□□ -0.57
COL4A5-201ENST00000328300 KIAA2013Q8IYS2 634 aa11.52□□□□□ -0.57
COL4A5-201ENST00000328300 C12orf29Q8N999 325 aa11.52□□□□□ -0.57
COL4A5-201ENST00000328300 TMEM109Q9BVC6 243 aa11.52□□□□□ -0.57
COL4A5-201ENST00000328300 TLE6Q9H808 572 aa11.52□□□□□ -0.57
COL4A5-201ENST00000328300 RPL26L1Q9UNX3 145 aaKnown RBP11.52□□□□□ -0.57
COL4A5-201ENST00000328300 SLC27A5Q9Y2P5 690 aa11.52□□□□□ -0.57
COL4A5-201ENST00000328300 KRT87PA6NCN2 255 aa11.52□□□□□ -0.57
COL4A5-201ENST00000328300 APOA1P02647 267 aa11.52□□□□□ -0.57
COL4A5-201ENST00000328300 TARSP26639 723 aaKnown RBP11.52□□□□□ -0.57
COL4A5-201ENST00000328300 SCTRP47872 440 aa11.52□□□□□ -0.57
COL4A5-201ENST00000328300 GPR15P49685 360 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms