RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 SNF8Q96H20 258 aa5.24□□□□□ -1.57
LRIT3-201ENST00000327908 RSPH9Q9H1X1 276 aaPredicted RBP5.24□□□□□ -1.57
LRIT3-201ENST00000327908 LINC00597Q9H2U6 94 aa5.24□□□□□ -1.57
LRIT3-201ENST00000327908 PABPC3Q9H361 631 aaKnown RBP5.24□□□□□ -1.57
LRIT3-201ENST00000327908 SALL4Q9UJQ4 1053 aa5.24□□□□□ -1.57
LRIT3-201ENST00000327908 GOLGA6L7A0A1B0GV03 622 aa5.24□□□□□ -1.57
LRIT3-201ENST00000327908 FAM170BA6NMN3 283 aa5.24□□□□□ -1.57
LRIT3-201ENST00000327908 RNF103O00237 685 aa5.24□□□□□ -1.57
LRIT3-201ENST00000327908 STK25O00506 426 aa5.24□□□□□ -1.57
LRIT3-201ENST00000327908 KCNN4O15554 427 aa5.24□□□□□ -1.57
LRIT3-201ENST00000327908 DFNA5O60443 496 aa5.24□□□□□ -1.57
LRIT3-201ENST00000327908 MAFKO60675 156 aa5.24□□□□□ -1.57
LRIT3-201ENST00000327908 GPR37L1O60883 481 aa5.24□□□□□ -1.57
LRIT3-201ENST00000327908 ERLIN1O75477 346 aa5.24□□□□□ -1.57
LRIT3-201ENST00000327908 SLU7O95391 586 aaKnown RBP5.24□□□□□ -1.57
LRIT3-201ENST00000327908 KLF8O95600 359 aaPredicted RBP5.24□□□□□ -1.57
LRIT3-201ENST00000327908 CRTAMO95727 393 aa5.24□□□□□ -1.57
LRIT3-201ENST00000327908 SRCP12931 536 aa5.24□□□□□ -1.57
LRIT3-201ENST00000327908 TFE3P19532 575 aaPredicted RBP5.24□□□□□ -1.57
LRIT3-201ENST00000327908 KELP23276 732 aa5.24□□□□□ -1.57
LRIT3-201ENST00000327908 IL4RP24394 825 aa5.24□□□□□ -1.57
LRIT3-201ENST00000327908 HLA-FP30511 346 aa5.24□□□□□ -1.57
LRIT3-201ENST00000327908 EPHB1P54762 984 aa5.24□□□□□ -1.57
LRIT3-201ENST00000327908 OVGP1Q12889 678 aa5.24□□□□□ -1.57
LRIT3-201ENST00000327908 SEMA5AQ13591 1074 aa5.24□□□□□ -1.57
LRIT3-201ENST00000327908 CCINQ13939 588 aa5.24□□□□□ -1.57
LRIT3-201ENST00000327908 PON2Q15165 354 aa5.24□□□□□ -1.57
LRIT3-201ENST00000327908 OASLQ15646 514 aaKnown RBP5.24□□□□□ -1.57
LRIT3-201ENST00000327908 GAB4Q2WGN9 574 aa5.24□□□□□ -1.57
LRIT3-201ENST00000327908 SH3PXD2AQ5TCZ1 1133 aa5.24□□□□□ -1.57
LRIT3-201ENST00000327908 GDPD4Q6W3E5 623 aa5.24□□□□□ -1.57
LRIT3-201ENST00000327908 PID1Q7Z2X4 250 aa5.24□□□□□ -1.57
LRIT3-201ENST00000327908 CCDC91Q7Z6B0 441 aa5.24□□□□□ -1.57
LRIT3-201ENST00000327908 ADIPOR2Q86V24 386 aa5.24□□□□□ -1.57
LRIT3-201ENST00000327908 PPIL6Q8IXY8 311 aa5.24□□□□□ -1.57
LRIT3-201ENST00000327908 SIX5Q8N196 739 aa5.24□□□□□ -1.57
LRIT3-201ENST00000327908 MPP5Q8N3R9 675 aa5.24□□□□□ -1.57
LRIT3-201ENST00000327908 CALML6Q8TD86 181 aa5.24□□□□□ -1.57
LRIT3-201ENST00000327908 MYO19Q96H55 970 aa5.24□□□□□ -1.57
LRIT3-201ENST00000327908 TSSK1BQ9BXA7 367 aa5.24□□□□□ -1.57
LRIT3-201ENST00000327908 FSD1LQ9BXM9 530 aa5.24□□□□□ -1.57
LRIT3-201ENST00000327908 ZCCHC2Q9C0B9 1178 aaKnown RBP5.24□□□□□ -1.57
LRIT3-201ENST00000327908 SMG9Q9H0W8 520 aaKnown RBP5.24□□□□□ -1.57
LRIT3-201ENST00000327908 TMEM245Q9H330 911 aa5.24□□□□□ -1.57
LRIT3-201ENST00000327908 PRMT8Q9NR22 394 aaPredicted RBP5.24□□□□□ -1.57
LRIT3-201ENST00000327908 PKD2L2Q9NZM6 624 aa5.24□□□□□ -1.57
LRIT3-201ENST00000327908 BFARQ9NZS9 450 aa5.24□□□□□ -1.57
LRIT3-201ENST00000327908 MPP6Q9NZW5 540 aa5.24□□□□□ -1.57
LRIT3-201ENST00000327908 TRIM10Q9UDY6 481 aa5.24□□□□□ -1.57
LRIT3-201ENST00000327908 RAB23Q9ULC3 237 aa5.24□□□□□ -1.57
LRIT3-201ENST00000327908 DUSP10Q9Y6W6 482 aa5.24□□□□□ -1.57
LRIT3-201ENST00000327908 EFCAB8A8MWE9 144 aa5.24□□□□□ -1.57
LRIT3-201ENST00000327908 GPR89AB7ZAQ6 455 aa5.24□□□□□ -1.57
LRIT3-201ENST00000327908 KCNJ13O60928 360 aa5.24□□□□□ -1.57
LRIT3-201ENST00000327908 KRT14P02533 472 aa5.24□□□□□ -1.57
LRIT3-201ENST00000327908 GPR89BP0CG08 455 aa5.24□□□□□ -1.57
LRIT3-201ENST00000327908 CHRNB1P11230 501 aa5.24□□□□□ -1.57
LRIT3-201ENST00000327908 TNFRSF8P28908 595 aa5.24□□□□□ -1.57
LRIT3-201ENST00000327908 HADHAP40939 763 aa5.24□□□□□ -1.57
LRIT3-201ENST00000327908 PGFP49763 221 aa5.24□□□□□ -1.57
LRIT3-201ENST00000327908 ARL4CP56559 192 aa5.24□□□□□ -1.57
LRIT3-201ENST00000327908 ZNF234Q14588 700 aa5.24□□□□□ -1.57
LRIT3-201ENST00000327908 DLG2Q15700 870 aa5.24□□□□□ -1.57
LRIT3-201ENST00000327908 ACCSLQ4AC99 568 aa5.24□□□□□ -1.57
LRIT3-201ENST00000327908 WDR45BQ5MNZ6 344 aa5.24□□□□□ -1.57
LRIT3-201ENST00000327908 SYCP2LQ5T4T6 812 aa5.24□□□□□ -1.57
LRIT3-201ENST00000327908 CCDC137Q6PK04 289 aaKnown RBP5.24□□□□□ -1.57
LRIT3-201ENST00000327908 TAOK1Q7L7X3 1001 aa5.24□□□□□ -1.57
LRIT3-201ENST00000327908 PRPF39Q86UA1 669 aaKnown RBP5.24□□□□□ -1.57
LRIT3-201ENST00000327908 LONP2Q86WA8 852 aa5.24□□□□□ -1.57
LRIT3-201ENST00000327908 RYBPQ8N488 228 aaPredicted RBP5.24□□□□□ -1.57
LRIT3-201ENST00000327908 CADM4Q8NFZ8 388 aa5.24□□□□□ -1.57
LRIT3-201ENST00000327908 OR7D4Q8NG98 312 aa5.24□□□□□ -1.57
LRIT3-201ENST00000327908 L2HGDHQ9H9P8 463 aa5.24□□□□□ -1.57
LRIT3-201ENST00000327908 PPIL1Q9Y3C6 166 aa5.24□□□□□ -1.57
LRIT3-201ENST00000327908 PCDHGA2Q9Y5H1 932 aa5.24□□□□□ -1.57
LRIT3-201ENST00000327908 DOCK8Q8NF50 2099 aa5.23□□□□□ -1.57
LRIT3-201ENST00000327908 UPK3BL1B0FP48 263 aa5.23□□□□□ -1.57
LRIT3-201ENST00000327908 UPK3BL2E5RIL1 263 aa5.23□□□□□ -1.57
LRIT3-201ENST00000327908 CNTN5O94779 1100 aa5.23□□□□□ -1.57
LRIT3-201ENST00000327908 SUN1O94901 812 aa5.23□□□□□ -1.57
LRIT3-201ENST00000327908 PTPN3P26045 913 aa5.23□□□□□ -1.57
LRIT3-201ENST00000327908 CD70P32970 193 aa5.23□□□□□ -1.57
LRIT3-201ENST00000327908 MAPK9P45984 424 aa5.23□□□□□ -1.57
LRIT3-201ENST00000327908 ATXN1P54253 815 aaKnown RBP5.23□□□□□ -1.57
LRIT3-201ENST00000327908 CDH17Q12864 832 aa5.23□□□□□ -1.57
LRIT3-201ENST00000327908 ARHGEF7Q14155 803 aa5.23□□□□□ -1.57
LRIT3-201ENST00000327908 TEAD4Q15561 434 aa5.23□□□□□ -1.57
LRIT3-201ENST00000327908 TMEM52BQ4KMG9 183 aa5.23□□□□□ -1.57
LRIT3-201ENST00000327908 TMEM31Q5JXX7 168 aa5.23□□□□□ -1.57
LRIT3-201ENST00000327908 ANKRD20A2Q5SQ80 823 aa5.23□□□□□ -1.57
LRIT3-201ENST00000327908 ANKRD20A1Q5TYW2 823 aa5.23□□□□□ -1.57
LRIT3-201ENST00000327908 ANKRD20A3Q5VUR7 823 aa5.23□□□□□ -1.57
LRIT3-201ENST00000327908 NCEH1Q6PIU2 408 aa5.23□□□□□ -1.57
LRIT3-201ENST00000327908 DTWD2Q8NBA8 298 aa5.23□□□□□ -1.57
LRIT3-201ENST00000327908 PHC3Q8NDX5 983 aa5.23□□□□□ -1.57
LRIT3-201ENST00000327908 PPHLN1Q8NEY8 458 aaKnown RBP5.23□□□□□ -1.57
LRIT3-201ENST00000327908 SIPA1Q96FS4 1042 aa5.23□□□□□ -1.57
LRIT3-201ENST00000327908 ASIC4Q96FT7 647 aa5.23□□□□□ -1.57
LRIT3-201ENST00000327908 IMP4Q96G21 291 aaKnown RBP5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms