RNA–Protein interactions for RNA: ENST00000327367.8

SMAD3-201, Transcript of SMAD family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD3, Length 6,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-201ENST00000327367 FAM220AQ7Z4H9 259 aa16.61■□□□□ 0.25
SMAD3-201ENST00000327367 DAW1Q8N136 415 aa16.61■□□□□ 0.25
SMAD3-201ENST00000327367 PHC3Q8NDX5 983 aa16.61■□□□□ 0.25
SMAD3-201ENST00000327367 KAT5Q92993 513 aa16.61■□□□□ 0.25
SMAD3-201ENST00000327367 DIRAS2Q96HU8 199 aa16.61■□□□□ 0.25
SMAD3-201ENST00000327367 STX16-NPEPL1H3BU86 382 aa16.61■□□□□ 0.25
SMAD3-201ENST00000327367 STX16O14662 325 aa16.61■□□□□ 0.25
SMAD3-201ENST00000327367 AP2S1P53680 142 aaPredicted RBP16.61■□□□□ 0.25
SMAD3-201ENST00000327367 BTN3A2P78410 334 aa16.61■□□□□ 0.25
SMAD3-201ENST00000327367 IER5Q5VY09 327 aa16.61■□□□□ 0.25
SMAD3-201ENST00000327367 NOTUMQ6P988 496 aa16.61■□□□□ 0.25
SMAD3-201ENST00000327367 PALB2Q86YC2 1186 aa16.61■□□□□ 0.25
SMAD3-201ENST00000327367 EIF1ADQ8N9N8 165 aaKnown RBP16.61■□□□□ 0.25
SMAD3-201ENST00000327367 SKA1Q96BD8 255 aa16.61■□□□□ 0.25
SMAD3-201ENST00000327367 BTBD9Q96Q07 612 aa16.61■□□□□ 0.25
SMAD3-201ENST00000327367 C12orf65Q9H3J6 166 aaKnown RBP16.61■□□□□ 0.25
SMAD3-201ENST00000327367 MALT1Q9UDY8 824 aa16.61■□□□□ 0.25
SMAD3-201ENST00000327367 FAM205AQ6ZU69 1335 aa16.61■□□□□ 0.25
SMAD3-201ENST00000327367 AVILO75366 819 aa16.61■□□□□ 0.25
SMAD3-201ENST00000327367 CAPGP40121 348 aa16.61■□□□□ 0.25
SMAD3-201ENST00000327367 MAGEA2P43356 314 aa16.61■□□□□ 0.25
SMAD3-201ENST00000327367 GPR1P46091 355 aa16.61■□□□□ 0.25
SMAD3-201ENST00000327367 HNMTP50135 292 aa16.61■□□□□ 0.25
SMAD3-201ENST00000327367 MYBPC1Q00872 1141 aa16.61■□□□□ 0.25
SMAD3-201ENST00000327367 PRAMEF18Q5VWM3 479 aa16.61■□□□□ 0.25
SMAD3-201ENST00000327367 FBXO42Q6P3S6 717 aa16.61■□□□□ 0.25
SMAD3-201ENST00000327367 RPTNQ6XPR3 784 aa16.61■□□□□ 0.25
SMAD3-201ENST00000327367 CCDC36Q8IYA8 594 aa16.61■□□□□ 0.25
SMAD3-201ENST00000327367 PTGR2Q8N8N7 351 aaPredicted RBP16.61■□□□□ 0.25
SMAD3-201ENST00000327367 UGGT1Q9NYU2 1555 aa16.61■□□□□ 0.25
SMAD3-201ENST00000327367 PRAMEF33A0A0G2JMD5 474 aa16.61■□□□□ 0.25
SMAD3-201ENST00000327367 H3BMM5 538 aa16.61■□□□□ 0.25
SMAD3-201ENST00000327367 PRAMEF10O60809 474 aa16.61■□□□□ 0.25
SMAD3-201ENST00000327367 RPN2P04844 631 aa16.61■□□□□ 0.25
SMAD3-201ENST00000327367 STAG3L1P0CL83 205 aa16.61■□□□□ 0.25
SMAD3-201ENST00000327367 RPL38P63173 70 aaKnown RBP16.61■□□□□ 0.25
SMAD3-201ENST00000327367 DEF8Q6ZN54 512 aa16.61■□□□□ 0.25
SMAD3-201ENST00000327367 TTLL6Q8N841 843 aa16.61■□□□□ 0.25
SMAD3-201ENST00000327367 COL26A1Q96A83 441 aa16.61■□□□□ 0.25
SMAD3-201ENST00000327367 C11orf24Q96F05 449 aaPredicted RBP16.61■□□□□ 0.25
SMAD3-201ENST00000327367 OPTCQ9UBM4 332 aa16.61■□□□□ 0.25
SMAD3-201ENST00000327367 FADS3Q9Y5Q0 445 aa16.61■□□□□ 0.25
SMAD3-201ENST00000327367 DHFRP00374 187 aa16.6■□□□□ 0.25
SMAD3-201ENST00000327367 FUT4P22083 530 aa16.6■□□□□ 0.25
SMAD3-201ENST00000327367 CDK9P50750 372 aaKnown RBP16.6■□□□□ 0.25
SMAD3-201ENST00000327367 SLC7A2P52569 658 aa16.6■□□□□ 0.25
SMAD3-201ENST00000327367 BCAT1P54687 386 aa16.6■□□□□ 0.25
SMAD3-201ENST00000327367 CXXC5Q7LFL8 322 aaKnown RBP16.6■□□□□ 0.25
SMAD3-201ENST00000327367 SLC4A11Q8NBS3 891 aa16.6■□□□□ 0.25
SMAD3-201ENST00000327367 PHF10Q8WUB8 498 aaKnown RBP16.6■□□□□ 0.25
SMAD3-201ENST00000327367 GH1P01241 217 aa16.6■□□□□ 0.25
SMAD3-201ENST00000327367 CLCN3P51790 818 aa16.6■□□□□ 0.25
SMAD3-201ENST00000327367 ST3GAL1Q11201 340 aa16.6■□□□□ 0.25
SMAD3-201ENST00000327367 UBE2Q1Q7Z7E8 422 aa16.6■□□□□ 0.25
SMAD3-201ENST00000327367 CEP295NLQ96MC4 621 aa16.6■□□□□ 0.25
SMAD3-201ENST00000327367 CNTNAP2Q9UHC6 1331 aa16.6■□□□□ 0.25
SMAD3-201ENST00000327367 ADIGQ0VDE8 80 aa16.6■□□□□ 0.25
SMAD3-201ENST00000327367 ZNF615Q8N8J6 731 aa16.6■□□□□ 0.25
SMAD3-201ENST00000327367 RP9Q8TA86 221 aaKnown RBP16.6■□□□□ 0.25
SMAD3-201ENST00000327367 TRIT1Q9H3H1 467 aaKnown RBP16.6■□□□□ 0.25
SMAD3-201ENST00000327367 TTC37Q6PGP7 1564 aa16.6■□□□□ 0.25
SMAD3-201ENST00000327367 TNFRSF8P28908 595 aa16.6■□□□□ 0.25
SMAD3-201ENST00000327367 MAPK9P45984 424 aa16.6■□□□□ 0.25
SMAD3-201ENST00000327367 MARCKSL1P49006 195 aa16.6■□□□□ 0.25
SMAD3-201ENST00000327367 PTPN11Q06124 597 aaPredicted RBP16.6■□□□□ 0.25
SMAD3-201ENST00000327367 SIM2Q14190 667 aaPredicted RBP16.6■□□□□ 0.25
SMAD3-201ENST00000327367 SV2AQ7L0J3 742 aa16.6■□□□□ 0.25
SMAD3-201ENST00000327367 EBF3Q9H4W6 596 aa16.6■□□□□ 0.25
SMAD3-201ENST00000327367 NCOA3Q9Y6Q9 1424 aa16.6■□□□□ 0.25
SMAD3-201ENST00000327367 METTL18O95568 372 aa16.6■□□□□ 0.25
SMAD3-201ENST00000327367 VCLP18206 1134 aa16.6■□□□□ 0.25
SMAD3-201ENST00000327367 MTHFRP42898 656 aa16.6■□□□□ 0.25
SMAD3-201ENST00000327367 SUZ12Q15022 739 aaKnown RBP16.6■□□□□ 0.25
SMAD3-201ENST00000327367 CBWD6Q4V339 395 aa16.6■□□□□ 0.25
SMAD3-201ENST00000327367 GPAT3Q53EU6 434 aa16.6■□□□□ 0.25
SMAD3-201ENST00000327367 HYIQ5T013 277 aa16.6■□□□□ 0.25
SMAD3-201ENST00000327367 MARC1Q5VT66 337 aa16.6■□□□□ 0.25
SMAD3-201ENST00000327367 UNC5AQ6ZN44 842 aa16.6■□□□□ 0.25
SMAD3-201ENST00000327367 ZNF720Q7Z2F6 126 aa16.6■□□□□ 0.25
SMAD3-201ENST00000327367 EIF3KQ9UBQ5 218 aaKnown RBP16.6■□□□□ 0.25
SMAD3-201ENST00000327367 MED14O60244 1454 aa16.6■□□□□ 0.25
SMAD3-201ENST00000327367 COL15A1P39059 1388 aa16.6■□□□□ 0.25
SMAD3-201ENST00000327367 A0A0X1KG70 313 aa16.59■□□□□ 0.25
SMAD3-201ENST00000327367 TRDMT1O14717 391 aaKnown RBP16.59■□□□□ 0.25
SMAD3-201ENST00000327367 HGFP14210 728 aa16.59■□□□□ 0.25
SMAD3-201ENST00000327367 ACAT1P24752 427 aaKnown RBP16.59■□□□□ 0.25
SMAD3-201ENST00000327367 GMFBP60983 142 aa16.59■□□□□ 0.25
SMAD3-201ENST00000327367 TCEA2Q15560 299 aa16.59■□□□□ 0.25
SMAD3-201ENST00000327367 ATP13A4Q4VNC1 1196 aa16.59■□□□□ 0.25
SMAD3-201ENST00000327367 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.59■□□□□ 0.25
SMAD3-201ENST00000327367 PACS1Q6VY07 963 aa16.59■□□□□ 0.25
SMAD3-201ENST00000327367 NETO2Q8NC67 525 aa16.59■□□□□ 0.25
SMAD3-201ENST00000327367 ART5Q96L15 291 aa16.59■□□□□ 0.25
SMAD3-201ENST00000327367 Q96MT0 163 aa16.59■□□□□ 0.25
SMAD3-201ENST00000327367 DUSP9Q99956 384 aaKnown RBP16.59■□□□□ 0.25
SMAD3-201ENST00000327367 RGS17Q9UGC6 210 aaPredicted RBP16.59■□□□□ 0.25
SMAD3-201ENST00000327367 TSPAN16Q9UKR8 245 aa16.59■□□□□ 0.25
SMAD3-201ENST00000327367 PCDHGA10Q9Y5H3 936 aa16.59■□□□□ 0.25
SMAD3-201ENST00000327367 TULP2O00295 520 aa16.59■□□□□ 0.25
SMAD3-201ENST00000327367 RFWD3Q6PCD5 774 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms