RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 PFKPQ01813 784 aa7.98□□□□□ -1.13
CIITA-201ENST00000324288 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.98□□□□□ -1.13
CIITA-201ENST00000324288 OR8H3Q8N146 312 aa7.98□□□□□ -1.13
CIITA-201ENST00000324288 TAS1R2Q8TE23 839 aa7.98□□□□□ -1.13
CIITA-201ENST00000324288 CPA4Q9UI42 421 aa7.98□□□□□ -1.13
CIITA-201ENST00000324288 DNPEPQ9ULA0 475 aa7.98□□□□□ -1.13
CIITA-201ENST00000324288 TRIM64CA6NLI5 447 aa7.98□□□□□ -1.13
CIITA-201ENST00000324288 KRT33AO76009 404 aa7.98□□□□□ -1.13
CIITA-201ENST00000324288 RECQL5O94762 991 aaPredicted RBP7.98□□□□□ -1.13
CIITA-201ENST00000324288 TBX4P57082 545 aa7.98□□□□□ -1.13
CIITA-201ENST00000324288 PDK2Q15119 407 aa7.98□□□□□ -1.13
CIITA-201ENST00000324288 CHPFQ8IZ52 775 aa7.98□□□□□ -1.13
CIITA-201ENST00000324288 SYNPOQ8N3V7 929 aa7.98□□□□□ -1.13
CIITA-201ENST00000324288 ENGASEQ8NFI3 743 aa7.98□□□□□ -1.13
CIITA-201ENST00000324288 EEF1AKMT1Q8WVE0 214 aa7.98□□□□□ -1.13
CIITA-201ENST00000324288 GAL3ST3Q96A11 431 aa7.98□□□□□ -1.13
CIITA-201ENST00000324288 CHIAQ9BZP6 476 aa7.98□□□□□ -1.13
CIITA-201ENST00000324288 SCN1AP35498 2009 aa7.98□□□□□ -1.13
CIITA-201ENST00000324288 GLI2P10070 1586 aa7.98□□□□□ -1.13
CIITA-201ENST00000324288 RFX7Q2KHR2 1363 aa7.98□□□□□ -1.13
CIITA-201ENST00000324288 SHROOM3Q8TF72 1996 aa7.98□□□□□ -1.13
CIITA-201ENST00000324288 TM9SF1O15321 606 aa7.98□□□□□ -1.13
CIITA-201ENST00000324288 FARP2O94887 1054 aaPredicted RBP7.98□□□□□ -1.13
CIITA-201ENST00000324288 LRATO95237 230 aa7.98□□□□□ -1.13
CIITA-201ENST00000324288 IFNA16P05015 189 aa7.98□□□□□ -1.13
CIITA-201ENST00000324288 CETPP11597 493 aa7.98□□□□□ -1.13
CIITA-201ENST00000324288 IST1P53990 364 aa7.98□□□□□ -1.13
CIITA-201ENST00000324288 SPESP1Q6UW49 350 aa7.98□□□□□ -1.13
CIITA-201ENST00000324288 MPZL3Q6UWV2 235 aa7.98□□□□□ -1.13
CIITA-201ENST00000324288 ZNF677Q86XU0 584 aa7.98□□□□□ -1.13
CIITA-201ENST00000324288 SCUBE3Q8IX30 993 aa7.98□□□□□ -1.13
CIITA-201ENST00000324288 SLC47A1Q96FL8 570 aa7.98□□□□□ -1.13
CIITA-201ENST00000324288 PCDH9Q9HC56 1237 aa7.98□□□□□ -1.13
CIITA-201ENST00000324288 SEMA4BQ9NPR2 832 aaPredicted RBP7.98□□□□□ -1.13
CIITA-201ENST00000324288 EXD2Q9NVH0 621 aa7.98□□□□□ -1.13
CIITA-201ENST00000324288 SAMHD1Q9Y3Z3 626 aaKnown RBP7.98□□□□□ -1.13
CIITA-201ENST00000324288 PTPN1P18031 435 aaKnown RBP7.98□□□□□ -1.13
CIITA-201ENST00000324288 OGFOD2Q6N063 350 aa7.98□□□□□ -1.13
CIITA-201ENST00000324288 FAM131AQ6UXB0 335 aa7.98□□□□□ -1.13
CIITA-201ENST00000324288 ZDHHC13Q8IUH4 622 aa7.98□□□□□ -1.13
CIITA-201ENST00000324288 TLR10Q9BXR5 811 aa7.98□□□□□ -1.13
CIITA-201ENST00000324288 SETD4Q9NVD3 440 aa7.98□□□□□ -1.13
CIITA-201ENST00000324288 INVSQ9Y283 1065 aa7.98□□□□□ -1.13
CIITA-201ENST00000324288 TOR1BO14657 336 aa7.98□□□□□ -1.13
CIITA-201ENST00000324288 MICAL2O94851 1124 aa7.98□□□□□ -1.13
CIITA-201ENST00000324288 EGFRP00533 1210 aa7.98□□□□□ -1.13
CIITA-201ENST00000324288 NFKB1P19838 968 aa7.98□□□□□ -1.13
CIITA-201ENST00000324288 CBWD6Q4V339 395 aa7.98□□□□□ -1.13
CIITA-201ENST00000324288 FBXO42Q6P3S6 717 aa7.98□□□□□ -1.13
CIITA-201ENST00000324288 ADHFE1Q8IWW8 467 aa7.98□□□□□ -1.13
CIITA-201ENST00000324288 ZCCHC9Q8N567 271 aaKnown RBP7.98□□□□□ -1.13
CIITA-201ENST00000324288 TMEM159Q96B96 161 aa7.98□□□□□ -1.13
CIITA-201ENST00000324288 EXOC2Q96KP1 924 aa7.98□□□□□ -1.13
CIITA-201ENST00000324288 TTYH1Q9H313 450 aaPredicted RBP7.98□□□□□ -1.13
CIITA-201ENST00000324288 GPR182O15218 404 aa7.97□□□□□ -1.13
CIITA-201ENST00000324288 SGTAO43765 313 aa7.97□□□□□ -1.13
CIITA-201ENST00000324288 VARSP26640 1264 aaKnown RBP7.97□□□□□ -1.13
CIITA-201ENST00000324288 KLRC2P26717 231 aa7.97□□□□□ -1.13
CIITA-201ENST00000324288 GP5P40197 560 aa7.97□□□□□ -1.13
CIITA-201ENST00000324288 BIKQ13323 160 aa7.97□□□□□ -1.13
CIITA-201ENST00000324288 GRTP1Q5TC63 336 aa7.97□□□□□ -1.13
CIITA-201ENST00000324288 GAL3ST1Q99999 423 aa7.97□□□□□ -1.13
CIITA-201ENST00000324288 IL25Q9H293 177 aa7.97□□□□□ -1.13
CIITA-201ENST00000324288 ERGIC3Q9Y282 383 aa7.97□□□□□ -1.13
CIITA-201ENST00000324288 ANKRD6Q9Y2G4 727 aa7.97□□□□□ -1.13
CIITA-201ENST00000324288 KCNK1O00180 336 aa7.97□□□□□ -1.13
CIITA-201ENST00000324288 EFR3AQ14156 821 aa7.97□□□□□ -1.13
CIITA-201ENST00000324288 SMU1Q2TAY7 513 aa7.97□□□□□ -1.13
CIITA-201ENST00000324288 EIF2S3LQ2VIR3 472 aaKnown RBP7.97□□□□□ -1.13
CIITA-201ENST00000324288 TRAPPC12Q8WVT3 735 aa7.97□□□□□ -1.13
CIITA-201ENST00000324288 CCDC126Q96EE4 140 aa7.97□□□□□ -1.13
CIITA-201ENST00000324288 TSPAN18Q96SJ8 248 aa7.97□□□□□ -1.13
CIITA-201ENST00000324288 CGRRF1Q99675 332 aa7.97□□□□□ -1.13
CIITA-201ENST00000324288 CAB39LQ9H9S4 337 aa7.97□□□□□ -1.13
CIITA-201ENST00000324288 CUEDC1Q9NWM3 386 aaPredicted RBP7.97□□□□□ -1.13
CIITA-201ENST00000324288 CEP170Q5SW79 1584 aa7.97□□□□□ -1.13
CIITA-201ENST00000324288 CPSF1Q10570 1443 aaKnown RBP7.97□□□□□ -1.13
CIITA-201ENST00000324288 CCRL2O00421 344 aa7.97□□□□□ -1.13
CIITA-201ENST00000324288 MTA2O94776 668 aa7.97□□□□□ -1.13
CIITA-201ENST00000324288 CYP2A7P20853 494 aa7.97□□□□□ -1.13
CIITA-201ENST00000324288 RPL5P46777 297 aaKnown RBP7.97□□□□□ -1.13
CIITA-201ENST00000324288 LY6KQ17RY6 165 aa7.97□□□□□ -1.13
CIITA-201ENST00000324288 ISCA1Q9BUE6 129 aa7.97□□□□□ -1.13
CIITA-201ENST00000324288 BAIAP2Q9UQB8 552 aa7.97□□□□□ -1.13
CIITA-201ENST00000324288 ENTPD4Q9Y227 616 aa7.97□□□□□ -1.13
CIITA-201ENST00000324288 MPDZO75970 2070 aa7.97□□□□□ -1.13
CIITA-201ENST00000324288 BUD23O43709 281 aaKnown RBP7.97□□□□□ -1.13
CIITA-201ENST00000324288 PGAM1P18669 254 aa7.97□□□□□ -1.13
CIITA-201ENST00000324288 LAMTOR4Q0VGL1 99 aa7.97□□□□□ -1.13
CIITA-201ENST00000324288 TRAP1Q12931 704 aaKnown RBP7.97□□□□□ -1.13
CIITA-201ENST00000324288 CAMK1DQ8IU85 385 aa7.97□□□□□ -1.13
CIITA-201ENST00000324288 C1GALT1C1Q96EU7 318 aa7.97□□□□□ -1.13
CIITA-201ENST00000324288 SLCO1B3Q9NPD5 702 aa7.97□□□□□ -1.13
CIITA-201ENST00000324288 ARHGAP20Q9P2F6 1191 aa7.97□□□□□ -1.13
CIITA-201ENST00000324288 CAPN15O75808 1086 aa7.97□□□□□ -1.13
CIITA-201ENST00000324288 HIST1H2ABP04908 130 aa7.97□□□□□ -1.13
CIITA-201ENST00000324288 THP07101 528 aa7.97□□□□□ -1.13
CIITA-201ENST00000324288 RRP1BQ14684 758 aaKnown RBP7.97□□□□□ -1.13
CIITA-201ENST00000324288 TIMM50Q3ZCQ8 353 aa7.97□□□□□ -1.13
CIITA-201ENST00000324288 RUNDC3AQ59EK9 446 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms