RNA–Protein interactions for RNA: ENST00000322535.10

SF3B2-201, Transcript of splicing factor 3b subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B2, Length 2,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-201ENST00000322535 ADGRE1Q14246 886 aa10.44□□□□□ -0.74
SF3B2-201ENST00000322535 KCNT1Q5JUK3 1230 aa10.44□□□□□ -0.74
SF3B2-201ENST00000322535 METTL11BQ5VVY1 283 aa10.44□□□□□ -0.74
SF3B2-201ENST00000322535 TMEM130Q8N3G9 435 aa10.44□□□□□ -0.74
SF3B2-201ENST00000322535 ASCC1Q8N9N2 400 aaKnown RBP10.44□□□□□ -0.74
SF3B2-201ENST00000322535 TRUB1Q8WWH5 349 aaKnown RBP10.44□□□□□ -0.74
SF3B2-201ENST00000322535 GPR20Q99678 358 aa10.44□□□□□ -0.74
SF3B2-201ENST00000322535 C1QTNF7Q9BXJ2 289 aa10.44□□□□□ -0.74
SF3B2-201ENST00000322535 EMILIN2Q9BXX0 1053 aa10.44□□□□□ -0.74
SF3B2-201ENST00000322535 EPS8L2Q9H6S3 715 aa10.44□□□□□ -0.74
SF3B2-201ENST00000322535 TIGARQ9NQ88 270 aa10.44□□□□□ -0.74
SF3B2-201ENST00000322535 AGPAT3Q9NRZ7 376 aa10.44□□□□□ -0.74
SF3B2-201ENST00000322535 IL20Q9NYY1 176 aa10.44□□□□□ -0.74
SF3B2-201ENST00000322535 SLC27A5Q9Y2P5 690 aa10.44□□□□□ -0.74
SF3B2-201ENST00000322535 TRAF6Q9Y4K3 522 aa10.44□□□□□ -0.74
SF3B2-201ENST00000322535 LOC285556D6RIA3 1793 aa10.43□□□□□ -0.74
SF3B2-201ENST00000322535 FSCN2O14926 492 aa10.43□□□□□ -0.74
SF3B2-201ENST00000322535 HLA-DRAP01903 254 aa10.43□□□□□ -0.74
SF3B2-201ENST00000322535 ABHD2P08910 425 aa10.43□□□□□ -0.74
SF3B2-201ENST00000322535 CDH1P12830 882 aa10.43□□□□□ -0.74
SF3B2-201ENST00000322535 POLR2BP30876 1174 aaKnown RBP10.43□□□□□ -0.74
SF3B2-201ENST00000322535 CLCN3P51790 818 aa10.43□□□□□ -0.74
SF3B2-201ENST00000322535 HSD17B7P56937 341 aa10.43□□□□□ -0.74
SF3B2-201ENST00000322535 TRPC3Q13507 836 aa10.43□□□□□ -0.74
SF3B2-201ENST00000322535 PPP2R5DQ14738 602 aa10.43□□□□□ -0.74
SF3B2-201ENST00000322535 EMC2Q15006 297 aa10.43□□□□□ -0.74
SF3B2-201ENST00000322535 PPP1R3AQ16821 1122 aa10.43□□□□□ -0.74
SF3B2-201ENST00000322535 CELF3Q5SZQ8 465 aaKnown RBP10.43□□□□□ -0.74
SF3B2-201ENST00000322535 SCARA3Q6AZY7 606 aa10.43□□□□□ -0.74
SF3B2-201ENST00000322535 ANKRD26P1Q6NSI1 321 aa10.43□□□□□ -0.74
SF3B2-201ENST00000322535 XRRA1Q6P2D8 792 aa10.43□□□□□ -0.74
SF3B2-201ENST00000322535 METTL7BQ6UX53 244 aa10.43□□□□□ -0.74
SF3B2-201ENST00000322535 ZNF704Q6ZNC4 412 aaPredicted RBP10.43□□□□□ -0.74
SF3B2-201ENST00000322535 FRMD7Q6ZUT3 714 aa10.43□□□□□ -0.74
SF3B2-201ENST00000322535 CHST15Q7LFX5 561 aaPredicted RBP10.43□□□□□ -0.74
SF3B2-201ENST00000322535 POLNQ7Z5Q5 900 aa10.43□□□□□ -0.74
SF3B2-201ENST00000322535 ADAMTSL2Q86TH1 951 aa10.43□□□□□ -0.74
SF3B2-201ENST00000322535 OR5H6Q8NGV6 325 aa10.43□□□□□ -0.74
SF3B2-201ENST00000322535 PDCD6IPQ8WUM4 868 aaKnown RBP10.43□□□□□ -0.74
SF3B2-201ENST00000322535 SEPT1Q8WYJ6 367 aa10.43□□□□□ -0.74
SF3B2-201ENST00000322535 E2F7Q96AV8 911 aa10.43□□□□□ -0.74
SF3B2-201ENST00000322535 FRMD8Q9BZ67 464 aaPredicted RBP10.43□□□□□ -0.74
SF3B2-201ENST00000322535 C20orf27Q9GZN8 174 aa10.43□□□□□ -0.74
SF3B2-201ENST00000322535 STN1Q9H668 368 aaKnown RBP10.43□□□□□ -0.74
SF3B2-201ENST00000322535 MAGEE1Q9HCI5 957 aa10.43□□□□□ -0.74
SF3B2-201ENST00000322535 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.43□□□□□ -0.74
SF3B2-201ENST00000322535 RIC8BQ9NVN3 520 aa10.43□□□□□ -0.74
SF3B2-201ENST00000322535 MRPL39Q9NYK5 338 aaKnown RBP10.43□□□□□ -0.74
SF3B2-201ENST00000322535 ENOPH1Q9UHY7 261 aa10.43□□□□□ -0.74
SF3B2-201ENST00000322535 ZNF229Q9UJW7 825 aa10.43□□□□□ -0.74
SF3B2-201ENST00000322535 USTQ9Y2C2 406 aa10.43□□□□□ -0.74
SF3B2-201ENST00000322535 C7orf72A4D263 438 aa10.43□□□□□ -0.74
SF3B2-201ENST00000322535 COPEO14579 308 aa10.43□□□□□ -0.74
SF3B2-201ENST00000322535 MUSKO15146 869 aa10.43□□□□□ -0.74
SF3B2-201ENST00000322535 NUAK1O60285 661 aa10.43□□□□□ -0.74
SF3B2-201ENST00000322535 NOL3O60936 208 aaKnown RBP10.43□□□□□ -0.74
SF3B2-201ENST00000322535 LYPLA1O75608 230 aaPredicted RBP10.43□□□□□ -0.74
SF3B2-201ENST00000322535 ITGAXP20702 1163 aa10.43□□□□□ -0.74
SF3B2-201ENST00000322535 PKLRP30613 574 aa10.43□□□□□ -0.74
SF3B2-201ENST00000322535 ARHGDIBP52566 201 aa10.43□□□□□ -0.74
SF3B2-201ENST00000322535 GPLD1P80108 840 aa10.43□□□□□ -0.74
SF3B2-201ENST00000322535 ZNF33BQ06732 778 aa10.43□□□□□ -0.74
SF3B2-201ENST00000322535 DMP1Q13316 513 aaPredicted RBP10.43□□□□□ -0.74
SF3B2-201ENST00000322535 POU6F1Q14863 301 aa10.43□□□□□ -0.74
SF3B2-201ENST00000322535 ZNF792Q3KQV3 632 aa10.43□□□□□ -0.74
SF3B2-201ENST00000322535 FAM209BQ5JX69 171 aa10.43□□□□□ -0.74
SF3B2-201ENST00000322535 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.43□□□□□ -0.74
SF3B2-201ENST00000322535 VWA5B1Q5TIE3 1220 aa10.43□□□□□ -0.74
SF3B2-201ENST00000322535 CES4AQ5XG92 561 aa10.43□□□□□ -0.74
SF3B2-201ENST00000322535 TAPT1Q6NXT6 567 aa10.43□□□□□ -0.74
SF3B2-201ENST00000322535 CDHR3Q6ZTQ4 885 aa10.43□□□□□ -0.74
SF3B2-201ENST00000322535 LYSMD3Q7Z3D4 306 aa10.43□□□□□ -0.74
SF3B2-201ENST00000322535 FRMD5Q7Z6J6 570 aa10.43□□□□□ -0.74
SF3B2-201ENST00000322535 PALM2Q8IXS6 379 aa10.43□□□□□ -0.74
SF3B2-201ENST00000322535 SLC4A11Q8NBS3 891 aa10.43□□□□□ -0.74
SF3B2-201ENST00000322535 GOT1L1Q8NHS2 421 aaPredicted RBP10.43□□□□□ -0.74
SF3B2-201ENST00000322535 DEPDC7Q96QD5 511 aa10.43□□□□□ -0.74
SF3B2-201ENST00000322535 BTBD2Q9BX70 525 aa10.43□□□□□ -0.74
SF3B2-201ENST00000322535 MCCC2Q9HCC0 563 aa10.43□□□□□ -0.74
SF3B2-201ENST00000322535 AVENQ9NQS1 362 aaPredicted RBP10.43□□□□□ -0.74
SF3B2-201ENST00000322535 CHST12Q9NRB3 414 aa10.43□□□□□ -0.74
SF3B2-201ENST00000322535 CDH7Q9ULB5 785 aa10.43□□□□□ -0.74
SF3B2-201ENST00000322535 DGKBQ9Y6T7 804 aa10.43□□□□□ -0.74
SF3B2-201ENST00000322535 H3BNH8 94 aa10.42□□□□□ -0.74
SF3B2-201ENST00000322535 DYNC1LI2O43237 492 aaPredicted RBP10.42□□□□□ -0.74
SF3B2-201ENST00000322535 EXTL3O43909 919 aa10.42□□□□□ -0.74
SF3B2-201ENST00000322535 KPNA6O60684 536 aa10.42□□□□□ -0.74
SF3B2-201ENST00000322535 ALDH1A2O94788 518 aa10.42□□□□□ -0.74
SF3B2-201ENST00000322535 EDN1P05305 212 aa10.42□□□□□ -0.74
SF3B2-201ENST00000322535 SERPINA6P08185 405 aa10.42□□□□□ -0.74
SF3B2-201ENST00000322535 CD58P19256 250 aa10.42□□□□□ -0.74
SF3B2-201ENST00000322535 GPX6P59796 221 aa10.42□□□□□ -0.74
SF3B2-201ENST00000322535 STX1BP61266 288 aa10.42□□□□□ -0.74
SF3B2-201ENST00000322535 FKBP1BP68106 108 aa10.42□□□□□ -0.74
SF3B2-201ENST00000322535 FAAP100Q0VG06 881 aa10.42□□□□□ -0.74
SF3B2-201ENST00000322535 NFE2L1Q14494 772 aa10.42□□□□□ -0.74
SF3B2-201ENST00000322535 DGKDQ16760 1214 aa10.42□□□□□ -0.74
SF3B2-201ENST00000322535 TMPRSS9Q7Z410 1059 aa10.42□□□□□ -0.74
SF3B2-201ENST00000322535 PLEKHH3Q7Z736 793 aa10.42□□□□□ -0.74
SF3B2-201ENST00000322535 LRRTM3Q86VH5 581 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms