RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 UTP4Q969X6 686 aaKnown RBP7.67□□□□□ -1.18
IFT88-201ENST00000319980 IMP4Q96G21 291 aaKnown RBP7.67□□□□□ -1.18
IFT88-201ENST00000319980 MCMBPQ9BTE3 642 aa7.67□□□□□ -1.18
IFT88-201ENST00000319980 TBC1D10AQ9BXI6 508 aa7.67□□□□□ -1.18
IFT88-201ENST00000319980 UBE2OQ9C0C9 1292 aaKnown RBP7.67□□□□□ -1.18
IFT88-201ENST00000319980 RHOJQ9H4E5 214 aa7.67□□□□□ -1.18
IFT88-201ENST00000319980 NOD2Q9HC29 1040 aa7.67□□□□□ -1.18
IFT88-201ENST00000319980 PAK6Q9NQU5 681 aaPredicted RBP7.67□□□□□ -1.18
IFT88-201ENST00000319980 SAR1AQ9NR31 198 aa7.67□□□□□ -1.18
IFT88-201ENST00000319980 ARL8BQ9NVJ2 186 aa7.67□□□□□ -1.18
IFT88-201ENST00000319980 TLK1Q9UKI8 766 aa7.67□□□□□ -1.18
IFT88-201ENST00000319980 DNAJC16Q9Y2G8 782 aa7.67□□□□□ -1.18
IFT88-201ENST00000319980 BPTFQ12830 3046 aa7.67□□□□□ -1.18
IFT88-201ENST00000319980 FCHO1O14526 889 aa7.66□□□□□ -1.18
IFT88-201ENST00000319980 DNAJC6O75061 913 aa7.66□□□□□ -1.18
IFT88-201ENST00000319980 SERPINE1P05121 402 aa7.66□□□□□ -1.18
IFT88-201ENST00000319980 ZDHHC11BP0C7U3 371 aa7.66□□□□□ -1.18
IFT88-201ENST00000319980 PAMP19021 973 aa7.66□□□□□ -1.18
IFT88-201ENST00000319980 ARCN1P48444 511 aaKnown RBP7.66□□□□□ -1.18
IFT88-201ENST00000319980 RING1Q06587 406 aa7.66□□□□□ -1.18
IFT88-201ENST00000319980 THOC5Q13769 683 aaKnown RBP7.66□□□□□ -1.18
IFT88-201ENST00000319980 IHHQ14623 411 aa7.66□□□□□ -1.18
IFT88-201ENST00000319980 SPDYAQ5MJ70 313 aa7.66□□□□□ -1.18
IFT88-201ENST00000319980 SLC8B1Q6J4K2 584 aa7.66□□□□□ -1.18
IFT88-201ENST00000319980 KDELC1Q6UW63 502 aa7.66□□□□□ -1.18
IFT88-201ENST00000319980 LGI2Q8N0V4 545 aa7.66□□□□□ -1.18
IFT88-201ENST00000319980 C2orf15Q8WU43 125 aaKnown RBP7.66□□□□□ -1.18
IFT88-201ENST00000319980 INPP5DQ92835 1189 aa7.66□□□□□ -1.18
IFT88-201ENST00000319980 GPR22Q99680 433 aa7.66□□□□□ -1.18
IFT88-201ENST00000319980 EBF4Q9BQW3 602 aa7.66□□□□□ -1.18
IFT88-201ENST00000319980 NMRAL1Q9HBL8 299 aa7.66□□□□□ -1.18
IFT88-201ENST00000319980 NSMCE4AQ9NXX6 385 aa7.66□□□□□ -1.18
IFT88-201ENST00000319980 ZNF212Q9UDV6 495 aa7.66□□□□□ -1.18
IFT88-201ENST00000319980 FRMPD3Q5JV73 1810 aa7.66□□□□□ -1.18
IFT88-201ENST00000319980 A0A0D9SEW6 157 aa7.66□□□□□ -1.18
IFT88-201ENST00000319980 F5H5T6 163 aa7.66□□□□□ -1.18
IFT88-201ENST00000319980 GJB3O75712 270 aa7.66□□□□□ -1.18
IFT88-201ENST00000319980 TACR2P21452 398 aa7.66□□□□□ -1.18
IFT88-201ENST00000319980 GRK2P25098 689 aa7.66□□□□□ -1.18
IFT88-201ENST00000319980 ARRB2P32121 409 aa7.66□□□□□ -1.18
IFT88-201ENST00000319980 GLRBP48167 497 aa7.66□□□□□ -1.18
IFT88-201ENST00000319980 TUFMP49411 452 aaKnown RBP7.66□□□□□ -1.18
IFT88-201ENST00000319980 MLLT1Q03111 559 aaPredicted RBP7.66□□□□□ -1.18
IFT88-201ENST00000319980 TLE2Q04725 743 aa7.66□□□□□ -1.18
IFT88-201ENST00000319980 ZNF460Q14592 562 aa7.66□□□□□ -1.18
IFT88-201ENST00000319980 DBN1Q16643 649 aa7.66□□□□□ -1.18
IFT88-201ENST00000319980 PARP15Q460N3 678 aa7.66□□□□□ -1.18
IFT88-201ENST00000319980 SPOUT1Q5T280 376 aaKnown RBP7.66□□□□□ -1.18
IFT88-201ENST00000319980 ZNF470Q6ECI4 717 aa7.66□□□□□ -1.18
IFT88-201ENST00000319980 FAM117BQ6P1L5 589 aa7.66□□□□□ -1.18
IFT88-201ENST00000319980 ATG14Q6ZNE5 492 aa7.66□□□□□ -1.18
IFT88-201ENST00000319980 TMCO2Q7Z6W1 182 aaPredicted RBP7.66□□□□□ -1.18
IFT88-201ENST00000319980 PNPLA1Q8N8W4 532 aa7.66□□□□□ -1.18
IFT88-201ENST00000319980 PPP4R1Q8TF05 950 aa7.66□□□□□ -1.18
IFT88-201ENST00000319980 PTCD2Q8WV60 388 aaKnown RBP7.66□□□□□ -1.18
IFT88-201ENST00000319980 RAB3IPQ96QF0 476 aaPredicted RBP7.66□□□□□ -1.18
IFT88-201ENST00000319980 WWP1Q9H0M0 922 aa7.66□□□□□ -1.18
IFT88-201ENST00000319980 TASP1Q9H6P5 420 aa7.66□□□□□ -1.18
IFT88-201ENST00000319980 VPS45Q9NRW7 570 aa7.66□□□□□ -1.18
IFT88-201ENST00000319980 TREX1Q9NSU2 369 aa7.66□□□□□ -1.18
IFT88-201ENST00000319980 MTRRQ9UBK8 725 aa7.66□□□□□ -1.18
IFT88-201ENST00000319980 UXTQ9UBK9 157 aaPredicted RBP7.66□□□□□ -1.18
IFT88-201ENST00000319980 DNMT3LQ9UJW3 386 aa7.66□□□□□ -1.18
IFT88-201ENST00000319980 VWA8A3KMH1 1905 aa7.66□□□□□ -1.18
IFT88-201ENST00000319980 GJB5O95377 273 aa7.65□□□□□ -1.18
IFT88-201ENST00000319980 SLC34A2O95436 690 aa7.65□□□□□ -1.18
IFT88-201ENST00000319980 CXCL10P02778 98 aa7.65□□□□□ -1.18
IFT88-201ENST00000319980 MMP2P08253 660 aa7.65□□□□□ -1.18
IFT88-201ENST00000319980 PTPN4P29074 926 aa7.65□□□□□ -1.18
IFT88-201ENST00000319980 SLC1A2P43004 574 aa7.65□□□□□ -1.18
IFT88-201ENST00000319980 HARS2P49590 506 aaKnown RBP7.65□□□□□ -1.18
IFT88-201ENST00000319980 SERPINH1P50454 418 aaKnown RBP7.65□□□□□ -1.18
IFT88-201ENST00000319980 KPNA1P52294 538 aaPredicted RBP7.65□□□□□ -1.18
IFT88-201ENST00000319980 ALDH18A1P54886 795 aaKnown RBP7.65□□□□□ -1.18
IFT88-201ENST00000319980 IL10RBQ08334 325 aa7.65□□□□□ -1.18
IFT88-201ENST00000319980 SERINC3Q13530 473 aa7.65□□□□□ -1.18
IFT88-201ENST00000319980 RIPK1Q13546 671 aa7.65□□□□□ -1.18
IFT88-201ENST00000319980 UGP2Q16851 508 aa7.65□□□□□ -1.18
IFT88-201ENST00000319980 NEPROQ6NW34 567 aa7.65□□□□□ -1.18
IFT88-201ENST00000319980 CLEC14AQ86T13 490 aa7.65□□□□□ -1.18
IFT88-201ENST00000319980 DENND1CQ8IV53 801 aa7.65□□□□□ -1.18
IFT88-201ENST00000319980 SLC41A1Q8IVJ1 513 aa7.65□□□□□ -1.18
IFT88-201ENST00000319980 CCDC117Q8IWD4 279 aaPredicted RBP7.65□□□□□ -1.18
IFT88-201ENST00000319980 PGBD5Q8N414 524 aa7.65□□□□□ -1.18
IFT88-201ENST00000319980 SPATA6LQ8N4H0 392 aa7.65□□□□□ -1.18
IFT88-201ENST00000319980 SREK1Q8WXA9 508 aaKnown RBP7.65□□□□□ -1.18
IFT88-201ENST00000319980 IGSF21Q96ID5 467 aa7.65□□□□□ -1.18
IFT88-201ENST00000319980 VN1R3Q9BXE9 311 aa7.65□□□□□ -1.18
IFT88-201ENST00000319980 OXCT2Q9BYC2 517 aaPredicted RBP7.65□□□□□ -1.18
IFT88-201ENST00000319980 UNKQ9C0B0 810 aaKnown RBP7.65□□□□□ -1.18
IFT88-201ENST00000319980 HEATR9A2RTY3 570 aa7.65□□□□□ -1.18
IFT88-201ENST00000319980 ZNF840PA6NDX5 716 aa7.65□□□□□ -1.18
IFT88-201ENST00000319980 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.65□□□□□ -1.18
IFT88-201ENST00000319980 G3V2L1 256 aa7.65□□□□□ -1.18
IFT88-201ENST00000319980 TK2O00142 265 aa7.65□□□□□ -1.18
IFT88-201ENST00000319980 AURKAO14965 403 aa7.65□□□□□ -1.18
IFT88-201ENST00000319980 CHUKO15111 745 aa7.65□□□□□ -1.18
IFT88-201ENST00000319980 CCDC22O60826 627 aa7.65□□□□□ -1.18
IFT88-201ENST00000319980 SEC24AO95486 1093 aa7.65□□□□□ -1.18
IFT88-201ENST00000319980 SLC35E2BP0CK96 405 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms